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The map label for this gene is nfrA [C]

Identifier: 183221486

GI number: 183221486

Start: 2197346

End: 2199097

Strand: Reverse

Name: nfrA [C]

Synonym: LEPBI_I2104

Alternate gene names: 183221486

Gene position: 2199097-2197346 (Counterclockwise)

Preceding gene: 183221493

Following gene: 183221485

Centisome position: 61.09

GC content: 35.96

Gene sequence:

>1752_bases
ATGGACAAATACCACGATTGCCAAAAGGAAAAAGGAAAAGGCCCCACGGCCCAATCAGCCGAAATCCAAGCCCAAAATTA
TTTGGAATTAGCCAATACAAAGGGAGCATGGGAATGGTCCGAAATCGCAAAACAGAACTCTAAGGAAGTCACAAAAGAAA
TTGTGATCTTACAAATGAGGATCCGTTTGAGAGAACAGGATTTAAGTCGGGCAACAGAGGTATTGGAACACGATCTCGTT
TCCTTTCCGAATGATCCCGATTTTTTATACCTACTTGGGAATTTGTATTTTGAACGAAAGATGTGGAACCAGTCACTTCT
GTATTATACGGCACTTTCGTTTGTCATTGAAAGAAGAGACAACCATTCCAAATACAAAAACATAACTGCCAAATCTCTTG
GTGAATTGAATTATAAACTGGATTATGCAAAAATTGCGATCAAACGATATAACGAATACAATTCCGTAAATAAAAACGAT
ATGGAAGTTTTATTTCGATTAGCACAAATATATTTTGTGTTAGGCGATTTTAAAATGTCGAAATTTTATTTGGAACAAAT
TCGCGAAAAAAATTCGAGAGATATTGACGCTTCTCATATGTTAGCTGAAATATATTTTCTAAATGCTCGTGATTTGGCGC
CTCAGTTTTTTTTGACATTAAAGAATGAAAACAAAATTCCAAAAGAAGGTTTTATGCCATTACTTTACCAATTGGTGAAT
GGATCAAACCTAGACTTATCGGAGAAACTTCGTGCTTTCATCAAAGGAAATCCAGGAAGGCTTTCCCCTCGTGTGGCTCT
TTTGGAACTTGCTGAAAAAAATAATGATCCAGAATACGAACAACTCAATGCAGAAACTGCTCAGTATGCATATGAATACC
GTCAATATGGACTCGCTGAAAATATCCTACGCCGTGGGATGAATCGGTTAAACCAAAATCAAATCGAACAAAGAGTCAAT
TATTTGGAAAAAATCTCAGCCTGCCAAGAGATGTTGGGACAATGGAACCGTTCGATCCTTTCCATCAAAGAAGCGATCAA
TTTGAGCTCTGATTTGGAAAAAAAGTTTCGACTGCGTTTTCGATTGGCATATCTGTATTTACAAGGGAATCTAAAGAAAG
AAGAAACTTCTGTCGCCATTCTATCGAAAACAATTTCGGAAAATCCAAGTCCTACTCATTATTATCTGAGAGGATTGTCT
TACTTTCAATTGGAAAAATACCAAGAAAGTATCAAAGACTATTCAGAAGCCATTCGTTTAGAACCAAACAATCCGAATTT
GTATTTTTATAGAGCCACATCGTATGATAAATTAAAACAATTCCCTGAAACGGAATCGGATCTTAAAAAAACAATTTCCC
TCAATCCAAATGCTTCCAATGCGATGAACTATTTAGGATACTTATATGCGGAAAAAGACATTCATCCTGAAGAAGCAAAA
CAACTTTTAAACCAAGCAATTGCCTTAGAACCTGACAATCCTGCTTATCAAGATAGTTTGGGTTGGGTGTACTATCGTAA
AAAAGAATTCAATTTAGCTCTTTTACATTTGAATTTTGCGGCTTCTTTGGCTTTGGAACGAGGGTTTGAAGATCCAGTGA
TATATGAACACTTAGGTGATGTTTATTTGGCCAAAAACGATCCTGTGAATGCTGTACAATTTTATAAACTTTCACTTTCA
AAAGACAAACAGAAGTCTAACAAAAACTTGGTGTCAAAAATCAGAAGAGTGGAAAAGGAAATTTCGGAATGA

Upstream 100 bases:

>100_bases
ATTGTCTCGGGCCATCCAAGAACAAATTGACGGCTACCAAGCAAACAATCGAAAGAAAGCCACAGAAGCCAAACTTGCGT
TTGAAACCTCTGTTTCGTTT

Downstream 100 bases:

>100_bases
TCCATCGTATTTTATTTCTTGTATTGATCGTATTGTTTGTCTCTTGCCAATCGACGGAAGTAGAAGATCCAAATTTTTTA
GGGAAGGCGGAAGGTAAATA

Product: TPR repeat-containing signal peptide

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 583; Mature: 583

Protein sequence:

>583_residues
MDKYHDCQKEKGKGPTAQSAEIQAQNYLELANTKGAWEWSEIAKQNSKEVTKEIVILQMRIRLREQDLSRATEVLEHDLV
SFPNDPDFLYLLGNLYFERKMWNQSLLYYTALSFVIERRDNHSKYKNITAKSLGELNYKLDYAKIAIKRYNEYNSVNKND
MEVLFRLAQIYFVLGDFKMSKFYLEQIREKNSRDIDASHMLAEIYFLNARDLAPQFFLTLKNENKIPKEGFMPLLYQLVN
GSNLDLSEKLRAFIKGNPGRLSPRVALLELAEKNNDPEYEQLNAETAQYAYEYRQYGLAENILRRGMNRLNQNQIEQRVN
YLEKISACQEMLGQWNRSILSIKEAINLSSDLEKKFRLRFRLAYLYLQGNLKKEETSVAILSKTISENPSPTHYYLRGLS
YFQLEKYQESIKDYSEAIRLEPNNPNLYFYRATSYDKLKQFPETESDLKKTISLNPNASNAMNYLGYLYAEKDIHPEEAK
QLLNQAIALEPDNPAYQDSLGWVYYRKKEFNLALLHLNFAASLALERGFEDPVIYEHLGDVYLAKNDPVNAVQFYKLSLS
KDKQKSNKNLVSKIRRVEKEISE

Sequences:

>Translated_583_residues
MDKYHDCQKEKGKGPTAQSAEIQAQNYLELANTKGAWEWSEIAKQNSKEVTKEIVILQMRIRLREQDLSRATEVLEHDLV
SFPNDPDFLYLLGNLYFERKMWNQSLLYYTALSFVIERRDNHSKYKNITAKSLGELNYKLDYAKIAIKRYNEYNSVNKND
MEVLFRLAQIYFVLGDFKMSKFYLEQIREKNSRDIDASHMLAEIYFLNARDLAPQFFLTLKNENKIPKEGFMPLLYQLVN
GSNLDLSEKLRAFIKGNPGRLSPRVALLELAEKNNDPEYEQLNAETAQYAYEYRQYGLAENILRRGMNRLNQNQIEQRVN
YLEKISACQEMLGQWNRSILSIKEAINLSSDLEKKFRLRFRLAYLYLQGNLKKEETSVAILSKTISENPSPTHYYLRGLS
YFQLEKYQESIKDYSEAIRLEPNNPNLYFYRATSYDKLKQFPETESDLKKTISLNPNASNAMNYLGYLYAEKDIHPEEAK
QLLNQAIALEPDNPAYQDSLGWVYYRKKEFNLALLHLNFAASLALERGFEDPVIYEHLGDVYLAKNDPVNAVQFYKLSLS
KDKQKSNKNLVSKIRRVEKEISE
>Mature_583_residues
MDKYHDCQKEKGKGPTAQSAEIQAQNYLELANTKGAWEWSEIAKQNSKEVTKEIVILQMRIRLREQDLSRATEVLEHDLV
SFPNDPDFLYLLGNLYFERKMWNQSLLYYTALSFVIERRDNHSKYKNITAKSLGELNYKLDYAKIAIKRYNEYNSVNKND
MEVLFRLAQIYFVLGDFKMSKFYLEQIREKNSRDIDASHMLAEIYFLNARDLAPQFFLTLKNENKIPKEGFMPLLYQLVN
GSNLDLSEKLRAFIKGNPGRLSPRVALLELAEKNNDPEYEQLNAETAQYAYEYRQYGLAENILRRGMNRLNQNQIEQRVN
YLEKISACQEMLGQWNRSILSIKEAINLSSDLEKKFRLRFRLAYLYLQGNLKKEETSVAILSKTISENPSPTHYYLRGLS
YFQLEKYQESIKDYSEAIRLEPNNPNLYFYRATSYDKLKQFPETESDLKKTISLNPNASNAMNYLGYLYAEKDIHPEEAK
QLLNQAIALEPDNPAYQDSLGWVYYRKKEFNLALLHLNFAASLALERGFEDPVIYEHLGDVYLAKNDPVNAVQFYKLSLS
KDKQKSNKNLVSKIRRVEKEISE

Specific function: Required For Bacteriophage N4 Adsorption. Serves As The Phage Receptor. [C]

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 68309; Mature: 68309

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKYHDCQKEKGKGPTAQSAEIQAQNYLELANTKGAWEWSEIAKQNSKEVTKEIVILQMR
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHH
IRLREQDLSRATEVLEHDLVSFPNDPDFLYLLGNLYFERKMWNQSLLYYTALSFVIERRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
NHSKYKNITAKSLGELNYKLDYAKIAIKRYNEYNSVNKNDMEVLFRLAQIYFVLGDFKMS
CHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KFYLEQIREKNSRDIDASHMLAEIYFLNARDLAPQFFLTLKNENKIPKEGFMPLLYQLVN
HHHHHHHHCCCCCCCCHHHHHHHHHEECCHHCCCEEEEEECCCCCCCCCHHHHHHHHHHC
GSNLDLSEKLRAFIKGNPGRLSPRVALLELAEKNNDPEYEQLNAETAQYAYEYRQYGLAE
CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHCCHHH
NILRRGMNRLNQNQIEQRVNYLEKISACQEMLGQWNRSILSIKEAINLSSDLEKKFRLRF
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RLAYLYLQGNLKKEETSVAILSKTISENPSPTHYYLRGLSYFQLEKYQESIKDYSEAIRL
HEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHEEE
EPNNPNLYFYRATSYDKLKQFPETESDLKKTISLNPNASNAMNYLGYLYAEKDIHPEEAK
CCCCCCEEEEECCCHHHHHHCCCCHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCHHHHH
QLLNQAIALEPDNPAYQDSLGWVYYRKKEFNLALLHLNFAASLALERGFEDPVIYEHLGD
HHHHHHEECCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCHHHHHCCC
VYLAKNDPVNAVQFYKLSLSKDKQKSNKNLVSKIRRVEKEISE
EEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKYHDCQKEKGKGPTAQSAEIQAQNYLELANTKGAWEWSEIAKQNSKEVTKEIVILQMR
CCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHHH
IRLREQDLSRATEVLEHDLVSFPNDPDFLYLLGNLYFERKMWNQSLLYYTALSFVIERRD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHHCC
NHSKYKNITAKSLGELNYKLDYAKIAIKRYNEYNSVNKNDMEVLFRLAQIYFVLGDFKMS
CHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
KFYLEQIREKNSRDIDASHMLAEIYFLNARDLAPQFFLTLKNENKIPKEGFMPLLYQLVN
HHHHHHHHCCCCCCCCHHHHHHHHHEECCHHCCCEEEEEECCCCCCCCCHHHHHHHHHHC
GSNLDLSEKLRAFIKGNPGRLSPRVALLELAEKNNDPEYEQLNAETAQYAYEYRQYGLAE
CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHCHHHHHHHHHHHHCCHHH
NILRRGMNRLNQNQIEQRVNYLEKISACQEMLGQWNRSILSIKEAINLSSDLEKKFRLRF
HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
RLAYLYLQGNLKKEETSVAILSKTISENPSPTHYYLRGLSYFQLEKYQESIKDYSEAIRL
HEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHEEE
EPNNPNLYFYRATSYDKLKQFPETESDLKKTISLNPNASNAMNYLGYLYAEKDIHPEEAK
CCCCCCEEEEECCCHHHHHHCCCCHHHHHHHEECCCCCHHHHHHHHHHHCCCCCCHHHHH
QLLNQAIALEPDNPAYQDSLGWVYYRKKEFNLALLHLNFAASLALERGFEDPVIYEHLGD
HHHHHHEECCCCCCCCCCCCCEEEEEECCCCEEEEEEHHHHHHHHHCCCCCCHHHHHCCC
VYLAKNDPVNAVQFYKLSLSKDKQKSNKNLVSKIRRVEKEISE
EEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]