| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221485
Identifier: 183221485
GI number: 183221485
Start: 2196561
End: 2197349
Strand: Reverse
Name: 183221485
Synonym: LEPBI_I2103
Alternate gene names: NA
Gene position: 2197349-2196561 (Counterclockwise)
Preceding gene: 183221486
Following gene: 183221484
Centisome position: 61.04
GC content: 34.47
Gene sequence:
>789_bases ATGATCCATCGTATTTTATTTCTTGTATTGATCGTATTGTTTGTCTCTTGCCAATCGACGGAAGTAGAAGATCCAAATTT TTTAGGGAAGGCGGAAGGTAAATATTTACCTGCAAAAGATACATCTTCCCAAACCTTTTTAAAACAAGTTTTAGAAAAAA ATCCAAACTTCCCAAGCTTTAAATCTGATTTTTCGATGCAGATCCAAACCTTCATTCCGAAAAAGGAAAATGTGTATTTA GATGGAAAGGTATATTTTTCAAAAGATACCAAACAGATAAAAATCCAATTAATGGACCAATTTTTTGGCATGGTGTTTTC CGAACTCATTGCAAACGCAGACCAAATCCAACTGAAACCCACAAGTACCAAAGAGATTCAAACTCTACCTATGGGTGACA TCCTCATCCAAGATCCAAATACTGGCAAAAAATATACGATTCCCTTTCCTGTTATCTACTCCTATCTAACGGGAAACTAT ATCGATGAAATCCAAAACCAAAAAGCTAGGTTTAACACAAATGATTCGCGTGTTTACCTCACCAAACTGGATGGAGAGTA TGAATATTTTTTTCAAGATGGAAATTTAGATCGCTTAGAGCTAACAAGCAATAAACGAGGATTAAAGGCCATTGCCATTG TGAAATCCAATCAAAAACAAACCCATCCACCAAAGGAAATTACAACTAAAGTGATCAGTTTGGATACAGAAAAGGAAAAT GTTCTCATTCAAATCAAATTGAAAAAATCTCAAATTACGGAAGTAGCTTCCCAAGTATTTCGATTTTAA
Upstream 100 bases:
>100_bases ATGCTGTACAATTTTATAAACTTTCACTTTCAAAAGACAAACAGAAGTCTAACAAAAACTTGGTGTCAAAAATCAGAAGA GTGGAAAAGGAAATTTCGGA
Downstream 100 bases:
>100_bases TAAATGAAATCATCTTATTTTGTTTCGTTAGTATTAATCCCCCTTTTTCTTTTTTCGGCAGACATACCGGAAGATCCTGA AAACAGATTAGAACTACCGG
Product: putative signal peptide
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MIHRILFLVLIVLFVSCQSTEVEDPNFLGKAEGKYLPAKDTSSQTFLKQVLEKNPNFPSFKSDFSMQIQTFIPKKENVYL DGKVYFSKDTKQIKIQLMDQFFGMVFSELIANADQIQLKPTSTKEIQTLPMGDILIQDPNTGKKYTIPFPVIYSYLTGNY IDEIQNQKARFNTNDSRVYLTKLDGEYEYFFQDGNLDRLELTSNKRGLKAIAIVKSNQKQTHPPKEITTKVISLDTEKEN VLIQIKLKKSQITEVASQVFRF
Sequences:
>Translated_262_residues MIHRILFLVLIVLFVSCQSTEVEDPNFLGKAEGKYLPAKDTSSQTFLKQVLEKNPNFPSFKSDFSMQIQTFIPKKENVYL DGKVYFSKDTKQIKIQLMDQFFGMVFSELIANADQIQLKPTSTKEIQTLPMGDILIQDPNTGKKYTIPFPVIYSYLTGNY IDEIQNQKARFNTNDSRVYLTKLDGEYEYFFQDGNLDRLELTSNKRGLKAIAIVKSNQKQTHPPKEITTKVISLDTEKEN VLIQIKLKKSQITEVASQVFRF >Mature_262_residues MIHRILFLVLIVLFVSCQSTEVEDPNFLGKAEGKYLPAKDTSSQTFLKQVLEKNPNFPSFKSDFSMQIQTFIPKKENVYL DGKVYFSKDTKQIKIQLMDQFFGMVFSELIANADQIQLKPTSTKEIQTLPMGDILIQDPNTGKKYTIPFPVIYSYLTGNY IDEIQNQKARFNTNDSRVYLTKLDGEYEYFFQDGNLDRLELTSNKRGLKAIAIVKSNQKQTHPPKEITTKVISLDTEKEN VLIQIKLKKSQITEVASQVFRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30193; Mature: 30193
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHRILFLVLIVLFVSCQSTEVEDPNFLGKAEGKYLPAKDTSSQTFLKQVLEKNPNFPSF CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCC KSDFSMQIQTFIPKKENVYLDGKVYFSKDTKQIKIQLMDQFFGMVFSELIANADQIQLKP CCCCCEEEEEECCCCCCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC TSTKEIQTLPMGDILIQDPNTGKKYTIPFPVIYSYLTGNYIDEIQNQKARFNTNDSRVYL CCCCCEEECCCCCEEEECCCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEE TKLDGEYEYFFQDGNLDRLELTSNKRGLKAIAIVKSNQKQTHPPKEITTKVISLDTEKEN EEECCCEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCHHHHEEEEEECCCCCC VLIQIKLKKSQITEVASQVFRF EEEEEEECHHHHHHHHHHHHCC >Mature Secondary Structure MIHRILFLVLIVLFVSCQSTEVEDPNFLGKAEGKYLPAKDTSSQTFLKQVLEKNPNFPSF CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHCCCCCCCC KSDFSMQIQTFIPKKENVYLDGKVYFSKDTKQIKIQLMDQFFGMVFSELIANADQIQLKP CCCCCEEEEEECCCCCCEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEC TSTKEIQTLPMGDILIQDPNTGKKYTIPFPVIYSYLTGNYIDEIQNQKARFNTNDSRVYL CCCCCEEECCCCCEEEECCCCCCEEECCHHHHHHHHCCHHHHHHCCCCCCCCCCCCEEEE TKLDGEYEYFFQDGNLDRLELTSNKRGLKAIAIVKSNQKQTHPPKEITTKVISLDTEKEN EEECCCEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCCCCCHHHHEEEEEECCCCCC VLIQIKLKKSQITEVASQVFRF EEEEEEECHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA