Click here to switch to the map view.

The map label for this gene is nodV [H]

Identifier: 183221430

GI number: 183221430

Start: 2129535

End: 2132180

Strand: Reverse

Name: nodV [H]

Synonym: LEPBI_I2048

Alternate gene names: 183221430

Gene position: 2132180-2129535 (Counterclockwise)

Preceding gene: 183221431

Following gene: 183221428

Centisome position: 59.23

GC content: 38.59

Gene sequence:

>2646_bases
TTGCCTCAAATAACAGCTTCGACAGACGATCATTTGAATGTCGAAGCAGATCTTTTGAAAACGATCATGGATGTCAGTTC
CACTGCCATCGTCTTACTCAACCCACAAGGACAAATCCTCTACGCCAATCCTGCCTCCGAATTGGTCCTTGGGATCAAAT
TGAATGACATCCTTTCGAGGACGTATGATGCGCCCCAATGGAAAAATACCTCTCTCGATGGTGGGCCTTGGCGAGAAGAA
GACCAACCGTTTAATGTCATACTGAAAACCAAACAACCTGTCACAGACATTCGGCATGCCATAGAGGATTCGAAAGGCAC
TAAAAAGTATTTATCTATCAATGGTTCACCCGTTTTCAATGAAGCAGGTGAAATCCGTTCCCTTGTGTTTCTCATCACCG
ATATCACGGAAAATGTTTTAAAACAAAAGGCATTAGAAGATAGCGAGGCAAAGTACCGCACCATCACTGAACTTTCTTTG
AGTATGGTTTATGATTTAGAGATCGCAACAGGAGTGAACCATTGGGCAGGAGCGATCTACGAAATCACTGGATATACACC
CGAAGAATACAATGCCATTGGTTATGAAGCTTGGATGGTTCTCATCCACCCCGAAGACAAAGAAAAAACCATCCAACAAT
TTGATGAGTCGATGGCCAATAAAACAAAGTTTTCCTGTGAATATCGATACCGAAGAAAAGACGGAAACTATGTTTATATC
GAAGACAACGGTATTTTTTTATATGATCAAGATGGAGTCGCCTATCGAATGTTTGGTGCTATGATCAATCGAACAGACCA
GATTGAAGCCAATTTAGCACTCAAAGAATCGGAATCAAGACTTCTCATGTCTCTTGATGCAGTTAAAATGGGGATATGGA
GTTGGGACATTGAACGAAGGATCATTTACTGGTCACCTCAAACCTATGAGATTTATGGATTGGATCCTAATTTGGAAGAG
ATCACCATTGAATCGTATTTAAAGTTGAACAATGAAGATGACTTAAAAAAAGTTTCAGAGGAAGTGCAACGTTTAAAAGA
GGATCCAACAAGATCAGGTTACATCATCCAACATAGAATTTTTCATAAGGATGGAAGTACACGCTGGGTTGAATCTAGAG
GGAATTTACTAAGAGACAAAGATGGCAACCCGTTTCGATTGATGGGAACGATCTTAGATGTCACCGATGCCAAAATTGCA
GAAGAGGCCTTACGCACTTCCGATGAAAGGTTTCGTGCTTTTTATCAATTTTCCACTGAAGCATTTTTGATTTTCGATGA
AAATTCTCTACGAGCAAAGGATTCCAATTTTGCGTTTCAAAACTTATTCGGTTATGCACCTGAGGATACAAAGAATTTAA
AGATTCGTTCACTGCTCACACCAGATTCACTCCAAAAAATTCGTGAAAAAATTGCCGATCATTCGAGTGATTCCATTGAA
ATACTATGCAAACGAAAAAATGGGGAAGTATTCCCTGCACTTATTTCCATCAAACGATTTAAATACAAACAATCCAATTC
CATTGCATACAGTATTTTTGATTTGAGTCCCTTAAAAGAAGTAGAAGAACTCCGCCAAATCAATTCTGAAATCAGAGAAA
AAAACAAACTCATTGAAAAACAAAAAATTGAGCTGGAGATGGCGTTTGAAAATTTAAAACGTACGCAAGAACAATTGGTC
CAATCAGAGAAATTGGCTGCCCTGGGGCAACTGATTGCGGGGATTGCGCATGAAATCAATAATCCTATTGGAGCTGTCAA
AGCTTCCAATCAAAATATGATGGATTGGCAAAAACGATACGGAATCGCCTCACAGTTGTTTCGTGAAGCGATATTGAATG
TTCCTCGGGAAGAACAAGTCATTTTAAAAACAATTTTATCCAATTTAGACCAACCGATTGAGTTTTATACTGGCAAGGAA
GAACGATTTCGGAAAAAGAAAAACAAAGAGATCCTCATCCAATATGGATGTAGCCTTCAGGATGCAGATGAGTTTGCAGA
AGCTTGGGTGGAATTAGGAATTGGAGAATTGGAAGACAGATATTTACCTCTCTTTCGGTCTCATTATCTTCGAGTATTTT
TAGATTATTTAGAATTGGAAATCCAATTTAGACGAAACACTCGGTCGATCCAACTTGCTGTGGATCGTGTATCAAAAATC
ATGTATGCTTTAAAAAACTTTTCCCATTTTGATTCCACAGGGAAAAAGATCAAAGCATCCCTTCAGGAAACAATTGAAAC
CGTTTTAACCATTTATCAAAATCAATTAAAAAGAGGAATCACTCTCATCAAAAATTATGATGAAGTGCCACCAATTGATT
GTTATCCGGATGATCTATTACATGTTTGGACCAATTTGATTTATAATTCTTTACAAGCGATGTCCTTCACAGGAAAACTT
GTGATCACGATCAAAGATTGTGGGGAAGAAGTCCTTGTTTCCTTACAAGACTCAGGTCCAGGTATAAACCCAGACATTCG
TTCCAAAATCTTTGAACCTTTTTTCACAACAAAACCTCCGGGAGAAGGAAGTGGGCTTGGTCTGGATATTGTGAATAAAA
TTGTGAAACGGCATGCGGGAAGGATTGAACTTACTTCCAAACCTGGTGAAACTATTTTTTTGATTTACTTGCCAAAAGGG
AATTAA

Upstream 100 bases:

>100_bases
TTTGAAAATTTACCAAAAAATGGAAGCAGTAAAATTGAATTCGCATAAATCTTAAGTATACTGCATAGTGGATACTATGC
AGTCTTCTCAGGAAGGATCA

Downstream 100 bases:

>100_bases
ACTTCGATGGCCTGTGAGATGGCGGTGATCAGTTCCTTTTCGTCCCAAGGTTTTTTCAAACAAGTGATGAGCCCAATTTC
TTTTTCTAAGGCTTCCAGTA

Product: putative sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 881; Mature: 880

Protein sequence:

>881_residues
MPQITASTDDHLNVEADLLKTIMDVSSTAIVLLNPQGQILYANPASELVLGIKLNDILSRTYDAPQWKNTSLDGGPWREE
DQPFNVILKTKQPVTDIRHAIEDSKGTKKYLSINGSPVFNEAGEIRSLVFLITDITENVLKQKALEDSEAKYRTITELSL
SMVYDLEIATGVNHWAGAIYEITGYTPEEYNAIGYEAWMVLIHPEDKEKTIQQFDESMANKTKFSCEYRYRRKDGNYVYI
EDNGIFLYDQDGVAYRMFGAMINRTDQIEANLALKESESRLLMSLDAVKMGIWSWDIERRIIYWSPQTYEIYGLDPNLEE
ITIESYLKLNNEDDLKKVSEEVQRLKEDPTRSGYIIQHRIFHKDGSTRWVESRGNLLRDKDGNPFRLMGTILDVTDAKIA
EEALRTSDERFRAFYQFSTEAFLIFDENSLRAKDSNFAFQNLFGYAPEDTKNLKIRSLLTPDSLQKIREKIADHSSDSIE
ILCKRKNGEVFPALISIKRFKYKQSNSIAYSIFDLSPLKEVEELRQINSEIREKNKLIEKQKIELEMAFENLKRTQEQLV
QSEKLAALGQLIAGIAHEINNPIGAVKASNQNMMDWQKRYGIASQLFREAILNVPREEQVILKTILSNLDQPIEFYTGKE
ERFRKKKNKEILIQYGCSLQDADEFAEAWVELGIGELEDRYLPLFRSHYLRVFLDYLELEIQFRRNTRSIQLAVDRVSKI
MYALKNFSHFDSTGKKIKASLQETIETVLTIYQNQLKRGITLIKNYDEVPPIDCYPDDLLHVWTNLIYNSLQAMSFTGKL
VITIKDCGEEVLVSLQDSGPGINPDIRSKIFEPFFTTKPPGEGSGLGLDIVNKIVKRHAGRIELTSKPGETIFLIYLPKG
N

Sequences:

>Translated_881_residues
MPQITASTDDHLNVEADLLKTIMDVSSTAIVLLNPQGQILYANPASELVLGIKLNDILSRTYDAPQWKNTSLDGGPWREE
DQPFNVILKTKQPVTDIRHAIEDSKGTKKYLSINGSPVFNEAGEIRSLVFLITDITENVLKQKALEDSEAKYRTITELSL
SMVYDLEIATGVNHWAGAIYEITGYTPEEYNAIGYEAWMVLIHPEDKEKTIQQFDESMANKTKFSCEYRYRRKDGNYVYI
EDNGIFLYDQDGVAYRMFGAMINRTDQIEANLALKESESRLLMSLDAVKMGIWSWDIERRIIYWSPQTYEIYGLDPNLEE
ITIESYLKLNNEDDLKKVSEEVQRLKEDPTRSGYIIQHRIFHKDGSTRWVESRGNLLRDKDGNPFRLMGTILDVTDAKIA
EEALRTSDERFRAFYQFSTEAFLIFDENSLRAKDSNFAFQNLFGYAPEDTKNLKIRSLLTPDSLQKIREKIADHSSDSIE
ILCKRKNGEVFPALISIKRFKYKQSNSIAYSIFDLSPLKEVEELRQINSEIREKNKLIEKQKIELEMAFENLKRTQEQLV
QSEKLAALGQLIAGIAHEINNPIGAVKASNQNMMDWQKRYGIASQLFREAILNVPREEQVILKTILSNLDQPIEFYTGKE
ERFRKKKNKEILIQYGCSLQDADEFAEAWVELGIGELEDRYLPLFRSHYLRVFLDYLELEIQFRRNTRSIQLAVDRVSKI
MYALKNFSHFDSTGKKIKASLQETIETVLTIYQNQLKRGITLIKNYDEVPPIDCYPDDLLHVWTNLIYNSLQAMSFTGKL
VITIKDCGEEVLVSLQDSGPGINPDIRSKIFEPFFTTKPPGEGSGLGLDIVNKIVKRHAGRIELTSKPGETIFLIYLPKG
N
>Mature_880_residues
PQITASTDDHLNVEADLLKTIMDVSSTAIVLLNPQGQILYANPASELVLGIKLNDILSRTYDAPQWKNTSLDGGPWREED
QPFNVILKTKQPVTDIRHAIEDSKGTKKYLSINGSPVFNEAGEIRSLVFLITDITENVLKQKALEDSEAKYRTITELSLS
MVYDLEIATGVNHWAGAIYEITGYTPEEYNAIGYEAWMVLIHPEDKEKTIQQFDESMANKTKFSCEYRYRRKDGNYVYIE
DNGIFLYDQDGVAYRMFGAMINRTDQIEANLALKESESRLLMSLDAVKMGIWSWDIERRIIYWSPQTYEIYGLDPNLEEI
TIESYLKLNNEDDLKKVSEEVQRLKEDPTRSGYIIQHRIFHKDGSTRWVESRGNLLRDKDGNPFRLMGTILDVTDAKIAE
EALRTSDERFRAFYQFSTEAFLIFDENSLRAKDSNFAFQNLFGYAPEDTKNLKIRSLLTPDSLQKIREKIADHSSDSIEI
LCKRKNGEVFPALISIKRFKYKQSNSIAYSIFDLSPLKEVEELRQINSEIREKNKLIEKQKIELEMAFENLKRTQEQLVQ
SEKLAALGQLIAGIAHEINNPIGAVKASNQNMMDWQKRYGIASQLFREAILNVPREEQVILKTILSNLDQPIEFYTGKEE
RFRKKKNKEILIQYGCSLQDADEFAEAWVELGIGELEDRYLPLFRSHYLRVFLDYLELEIQFRRNTRSIQLAVDRVSKIM
YALKNFSHFDSTGKKIKASLQETIETVLTIYQNQLKRGITLIKNYDEVPPIDCYPDDLLHVWTNLIYNSLQAMSFTGKLV
ITIKDCGEEVLVSLQDSGPGINPDIRSKIFEPFFTTKPPGEGSGLGLDIVNKIVKRHAGRIELTSKPGETIFLIYLPKGN

Specific function: Member of the two-component regulatory system nodV/nodW probably involved in the regulation of the transcription of genes involved in the nodulation process. NodV may function as a membrane-associated protein kinase that phosphorylates nodW in response to

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=113, Percent_Identity=41.5929203539823, Blast_Score=91, Evalue=3e-19,
Organism=Escherichia coli, GI1790300, Length=157, Percent_Identity=30.5732484076433, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1788381, Length=349, Percent_Identity=22.6361031518625, Blast_Score=86, Evalue=1e-17,
Organism=Escherichia coli, GI1788549, Length=175, Percent_Identity=32.5714285714286, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 101303; Mature: 101171

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50112 PAS ; PS50113 PAC ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQITASTDDHLNVEADLLKTIMDVSSTAIVLLNPQGQILYANPASELVLGIKLNDILSR
CCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCHHHEEEEEEHHHHHHH
TYDAPQWKNTSLDGGPWREEDQPFNVILKTKQPVTDIRHAIEDSKGTKKYLSINGSPVFN
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCC
EAGEIRSLVFLITDITENVLKQKALEDSEAKYRTITELSLSMVYDLEIATGVNHWAGAIY
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEHEEEEEHHCCCCHHCCEEE
EITGYTPEEYNAIGYEAWMVLIHPEDKEKTIQQFDESMANKTKFSCEYRYRRKDGNYVYI
EEECCCCHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCCEEEE
EDNGIFLYDQDGVAYRMFGAMINRTDQIEANLALKESESRLLMSLDAVKMGIWSWDIERR
ECCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCEEEEECCCE
IIYWSPQTYEIYGLDPNLEEITIESYLKLNNEDDLKKVSEEVQRLKEDPTRSGYIIQHRI
EEEECCCEEEEEECCCCHHHEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEE
FHKDGSTRWVESRGNLLRDKDGNPFRLMGTILDVTDAKIAEEALRTSDERFRAFYQFSTE
EECCCCCEEHHCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHEECCC
AFLIFDENSLRAKDSNFAFQNLFGYAPEDTKNLKIRSLLTPDSLQKIREKIADHSSDSIE
EEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEE
ILCKRKNGEVFPALISIKRFKYKQSNSIAYSIFDLSPLKEVEELRQINSEIREKNKLIEK
EEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QKIELEMAFENLKRTQEQLVQSEKLAALGQLIAGIAHEINNPIGAVKASNQNMMDWQKRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHC
GIASQLFREAILNVPREEQVILKTILSNLDQPIEFYTGKEERFRKKKNKEILIQYGCSLQ
CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHCCCEEEEEECCCCC
DADEFAEAWVELGIGELEDRYLPLFRSHYLRVFLDYLELEIQFRRNTRSIQLAVDRVSKI
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEHHHHHHHHH
MYALKNFSHFDSTGKKIKASLQETIETVLTIYQNQLKRGITLIKNYDEVPPIDCYPDDLL
HHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
HVWTNLIYNSLQAMSFTGKLVITIKDCGEEVLVSLQDSGPGINPDIRSKIFEPFFTTKPP
HHHHHHHHHHHHHHEECCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCC
GEGSGLGLDIVNKIVKRHAGRIELTSKPGETIFLIYLPKGN
CCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCC
>Mature Secondary Structure 
PQITASTDDHLNVEADLLKTIMDVSSTAIVLLNPQGQILYANPASELVLGIKLNDILSR
CCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCEEEECCHHHEEEEEEHHHHHHH
TYDAPQWKNTSLDGGPWREEDQPFNVILKTKQPVTDIRHAIEDSKGTKKYLSINGSPVFN
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCCCCC
EAGEIRSLVFLITDITENVLKQKALEDSEAKYRTITELSLSMVYDLEIATGVNHWAGAIY
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEEHEEEEEHHCCCCHHCCEEE
EITGYTPEEYNAIGYEAWMVLIHPEDKEKTIQQFDESMANKTKFSCEYRYRRKDGNYVYI
EEECCCCHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCEEEEEEEEEECCCCEEEE
EDNGIFLYDQDGVAYRMFGAMINRTDQIEANLALKESESRLLMSLDAVKMGIWSWDIERR
ECCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHCEEEEECCCE
IIYWSPQTYEIYGLDPNLEEITIESYLKLNNEDDLKKVSEEVQRLKEDPTRSGYIIQHRI
EEEECCCEEEEEECCCCHHHEEHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEE
FHKDGSTRWVESRGNLLRDKDGNPFRLMGTILDVTDAKIAEEALRTSDERFRAFYQFSTE
EECCCCCEEHHCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHHCCHHHHHHHHEECCC
AFLIFDENSLRAKDSNFAFQNLFGYAPEDTKNLKIRSLLTPDSLQKIREKIADHSSDSIE
EEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEE
ILCKRKNGEVFPALISIKRFKYKQSNSIAYSIFDLSPLKEVEELRQINSEIREKNKLIEK
EEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHH
QKIELEMAFENLKRTQEQLVQSEKLAALGQLIAGIAHEINNPIGAVKASNQNMMDWQKRY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHC
GIASQLFREAILNVPREEQVILKTILSNLDQPIEFYTGKEERFRKKKNKEILIQYGCSLQ
CHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHCCCEEEEEECCCCC
DADEFAEAWVELGIGELEDRYLPLFRSHYLRVFLDYLELEIQFRRNTRSIQLAVDRVSKI
CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEEEHHHHHHHHH
MYALKNFSHFDSTGKKIKASLQETIETVLTIYQNQLKRGITLIKNYDEVPPIDCYPDDLL
HHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH
HVWTNLIYNSLQAMSFTGKLVITIKDCGEEVLVSLQDSGPGINPDIRSKIFEPFFTTKPP
HHHHHHHHHHHHHHEECCEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHCCCCCCCCC
GEGSGLGLDIVNKIVKRHAGRIELTSKPGETIFLIYLPKGN
CCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2320582; 11157954; 12597275 [H]