| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221194
Identifier: 183221194
GI number: 183221194
Start: 1889568
End: 1891535
Strand: Direct
Name: 183221194
Synonym: LEPBI_I1808
Alternate gene names: NA
Gene position: 1889568-1891535 (Clockwise)
Preceding gene: 183221193
Following gene: 183221196
Centisome position: 52.49
GC content: 32.98
Gene sequence:
>1968_bases TTGGTATTGGGATTCACTACCAATATTATTTTTGCTGAAAGTACAGCCTTGGAAGATATTGCAGAGGCAAAAATTTTTCA ATCGGGAAACAATTGTAGGAAAGCAATACCACTCTATCAGTCTGCCTTACAAAAAAATAGGAATTCAATCGATGCTAAAT TAGGAATTGCTGACTGTAGTTATAAATTAGGTTCGTTTAAAGAAGGTAAAAAGTTTTATTTAGAAATCTTACAAAGAGAA TCTAAATTTATCCCTGCTGTTACAGGTTTATCAGAAATTTATTTAGTTGAAAATGACTTTAAATCAATCAATGAATTAAT CCAACCACTACTTTCGGAATTTCCGAATCACAGTGGCCTAAGAATTACAGAGGCAAAGTCCCTTTTGAAACAAGGGAAAA TTGATTCTGCTTTATATAAAATAAAAAGTTTATCAGAAAAATTGGATGAACCTTCAGATTTATTACGTATGTTAGCTGAG CTCTATTTCTCAAAGAATCATTATGAAGATGCATTAAATACTGTTGATTCCTATACAAAAAAAGAGCCGAATGATCCATC TGGATTTTCGTTTAAAGCTAAAGTCTTATTATATCAAAATTACTTTAAGCCTGACGCATTATTATCAATTTTACCTCTGG TAAAAGAATCACTCGATAATGCACTTAATTTAGATGATAAAAATGAAGAAGCACGTTTTTATTCTGTGTATCATGATCTG ATCCTATCGAATGCAAACAATGACAAAGGATTAAAAACCAAAGCTTTTAAAAGAATATATGAATTAGCTCGTGAATTTCC TGACAATCAAATGTATCATAGTTTGGAAGCAAACATTGCATGGGAGTTGGGCGAAACAAAATTTGCAGCTTTCCATTACC GAAGGGCATTGTCTCTAGATGATTTAGATGAAGTTTTAAGATTTGAGGCTGAAGAATACTCCATTGAGTTCGAAAAAGAG GAATCTAAACTGAGACGGGAACTAGGTGAATATAGAAAGGACCGTTTTTATTCAGAAAAACATTCGTTATACCACCAAAG TAGCCTTTTTCATTTATTTCGTGCCCGAGATTTAAGTGCACAAACTCCGATCATCCGCAGAGAATTATTAGATTTTTATA ATCAGTCAGGTGACGCAGTAAAATACACAAATTTATTACTTCGTTTACGGGAAGAAGATCCAAATTCATTTAAATTACAA AACAAATTAGAATTTGTAATCAAAAACATTAAAGATTCCATCGAATTTAAAGAAGGTTATATTCAAATTGATGCAAATTC AGTTGCGAATCATTCAGTTCGATTTAGTCCCGAAGTATATGTATTTGATTTAGAATCGATTTCACCTTTTCCTTATCATT TACAAGCGGGAAGATTATTTGCAGAAGCAATTAGATACCAATTAAAAAATATGTTGTCTGTCCGTGTGATCGAAGGAAGT GAATTCAAACAAATTCGAGCATTACTAAAAGAATCAAGTTACCATCCATTCTCTCAAACCATTCCCTTTACCATTGACAA TCTCCACCACTTAGATACAAAAAGACGAAATGCGACAAAGATCCGTTATGTGGTTCATGGTCGTTACCAAATTCAGAATG GAGACATTAAGTTTGAAATTTCTGTTTATGATCGGGATTTACTGAAGGACATTGTGACTTGGAAAACAAACCAAAGGGGC CGGGATAGTTTACCTACCATTGTTCATAGAATTGCAGAAAGAATCAAAAATACCTTACCCATCGAAGGTAAAATATTAAA AATAAAGAAAGATGAAGTCATCATTTCACTTGGAAAAGATGACGGTCTTAAACCCAATTCAAAACTCCTTTTCCAAAGGA GAGGAAAAACGTTATTTGAAGGTGATATTTTGATATTAGGTAAATCCATTGCAAGTATCAAACCAAAACAACGAGGATGG GAAAAAGAACTTGCTACTGGAGACGATGTGGTTCTATCAAAGGACTAG
Upstream 100 bases:
>100_bases ATTGGAATTGGAGTGAATCATCGAGGGGTCAAAGGCCGAGATGAAGGAGGTTATTTTGTTCCAGAACCTCGTTAGCCGAA AACTCAAATTTTTATCTGTT
Downstream 100 bases:
>100_bases AATAAAACCTTGAAACATATGTAAGTAATGCATCGGAAATTCGAATTTCTTTTTCCTTATCCAAAGTTTCCAGTTCTAAT TGGCAAATGTTCCCATCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: TPR-Repeat-Containing Protein
Number of amino acids: Translated: 655; Mature: 655
Protein sequence:
>655_residues MVLGFTTNIIFAESTALEDIAEAKIFQSGNNCRKAIPLYQSALQKNRNSIDAKLGIADCSYKLGSFKEGKKFYLEILQRE SKFIPAVTGLSEIYLVENDFKSINELIQPLLSEFPNHSGLRITEAKSLLKQGKIDSALYKIKSLSEKLDEPSDLLRMLAE LYFSKNHYEDALNTVDSYTKKEPNDPSGFSFKAKVLLYQNYFKPDALLSILPLVKESLDNALNLDDKNEEARFYSVYHDL ILSNANNDKGLKTKAFKRIYELAREFPDNQMYHSLEANIAWELGETKFAAFHYRRALSLDDLDEVLRFEAEEYSIEFEKE ESKLRRELGEYRKDRFYSEKHSLYHQSSLFHLFRARDLSAQTPIIRRELLDFYNQSGDAVKYTNLLLRLREEDPNSFKLQ NKLEFVIKNIKDSIEFKEGYIQIDANSVANHSVRFSPEVYVFDLESISPFPYHLQAGRLFAEAIRYQLKNMLSVRVIEGS EFKQIRALLKESSYHPFSQTIPFTIDNLHHLDTKRRNATKIRYVVHGRYQIQNGDIKFEISVYDRDLLKDIVTWKTNQRG RDSLPTIVHRIAERIKNTLPIEGKILKIKKDEVIISLGKDDGLKPNSKLLFQRRGKTLFEGDILILGKSIASIKPKQRGW EKELATGDDVVLSKD
Sequences:
>Translated_655_residues MVLGFTTNIIFAESTALEDIAEAKIFQSGNNCRKAIPLYQSALQKNRNSIDAKLGIADCSYKLGSFKEGKKFYLEILQRE SKFIPAVTGLSEIYLVENDFKSINELIQPLLSEFPNHSGLRITEAKSLLKQGKIDSALYKIKSLSEKLDEPSDLLRMLAE LYFSKNHYEDALNTVDSYTKKEPNDPSGFSFKAKVLLYQNYFKPDALLSILPLVKESLDNALNLDDKNEEARFYSVYHDL ILSNANNDKGLKTKAFKRIYELAREFPDNQMYHSLEANIAWELGETKFAAFHYRRALSLDDLDEVLRFEAEEYSIEFEKE ESKLRRELGEYRKDRFYSEKHSLYHQSSLFHLFRARDLSAQTPIIRRELLDFYNQSGDAVKYTNLLLRLREEDPNSFKLQ NKLEFVIKNIKDSIEFKEGYIQIDANSVANHSVRFSPEVYVFDLESISPFPYHLQAGRLFAEAIRYQLKNMLSVRVIEGS EFKQIRALLKESSYHPFSQTIPFTIDNLHHLDTKRRNATKIRYVVHGRYQIQNGDIKFEISVYDRDLLKDIVTWKTNQRG RDSLPTIVHRIAERIKNTLPIEGKILKIKKDEVIISLGKDDGLKPNSKLLFQRRGKTLFEGDILILGKSIASIKPKQRGW EKELATGDDVVLSKD >Mature_655_residues MVLGFTTNIIFAESTALEDIAEAKIFQSGNNCRKAIPLYQSALQKNRNSIDAKLGIADCSYKLGSFKEGKKFYLEILQRE SKFIPAVTGLSEIYLVENDFKSINELIQPLLSEFPNHSGLRITEAKSLLKQGKIDSALYKIKSLSEKLDEPSDLLRMLAE LYFSKNHYEDALNTVDSYTKKEPNDPSGFSFKAKVLLYQNYFKPDALLSILPLVKESLDNALNLDDKNEEARFYSVYHDL ILSNANNDKGLKTKAFKRIYELAREFPDNQMYHSLEANIAWELGETKFAAFHYRRALSLDDLDEVLRFEAEEYSIEFEKE ESKLRRELGEYRKDRFYSEKHSLYHQSSLFHLFRARDLSAQTPIIRRELLDFYNQSGDAVKYTNLLLRLREEDPNSFKLQ NKLEFVIKNIKDSIEFKEGYIQIDANSVANHSVRFSPEVYVFDLESISPFPYHLQAGRLFAEAIRYQLKNMLSVRVIEGS EFKQIRALLKESSYHPFSQTIPFTIDNLHHLDTKRRNATKIRYVVHGRYQIQNGDIKFEISVYDRDLLKDIVTWKTNQRG RDSLPTIVHRIAERIKNTLPIEGKILKIKKDEVIISLGKDDGLKPNSKLLFQRRGKTLFEGDILILGKSIASIKPKQRGW EKELATGDDVVLSKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75834; Mature: 75834
Theoretical pI: Translated: 8.65; Mature: 8.65
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLGFTTNIIFAESTALEDIAEAKIFQSGNNCRKAIPLYQSALQKNRNSIDAKLGIADCS CEEEEEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCC YKLGSFKEGKKFYLEILQRESKFIPAVTGLSEIYLVENDFKSINELIQPLLSEFPNHSGL CCCCCCCCHHHHHHHHHHHHCCCCCHHCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCC RITEAKSLLKQGKIDSALYKIKSLSEKLDEPSDLLRMLAELYFSKNHYEDALNTVDSYTK EEHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC KEPNDPSGFSFKAKVLLYQNYFKPDALLSILPLVKESLDNALNLDDKNEEARFYSVYHDL CCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ILSNANNDKGLKTKAFKRIYELAREFPDNQMYHSLEANIAWELGETKFAAFHYRRALSLD HHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCCC DLDEVLRFEAEEYSIEFEKEESKLRRELGEYRKDRFYSEKHSLYHQSSLFHLFRARDLSA CHHHHHHHCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QTPIIRRELLDFYNQSGDAVKYTNLLLRLREEDPNSFKLQNKLEFVIKNIKDSIEFKEGY CCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHEECCCE IQIDANSVANHSVRFSPEVYVFDLESISPFPYHLQAGRLFAEAIRYQLKNMLSVRVIEGS EEEECCCCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCC EFKQIRALLKESSYHPFSQTIPFTIDNLHHLDTKRRNATKIRYVVHGRYQIQNGDIKFEI HHHHHHHHHHHCCCCCCCCCCCEEECCHHHHCCCCCCCEEEEEEEEEEEEEECCCEEEEE SVYDRDLLKDIVTWKTNQRGRDSLPTIVHRIAERIKNTLPIEGKILKIKKDEVIISLGKD EECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCC DGLKPNSKLLFQRRGKTLFEGDILILGKSIASIKPKQRGWEKELATGDDVVLSKD CCCCCCHHHHHHHCCCEEECCCEEEEECHHHHCCCHHCCCHHHCCCCCCEEEECC >Mature Secondary Structure MVLGFTTNIIFAESTALEDIAEAKIFQSGNNCRKAIPLYQSALQKNRNSIDAKLGIADCS CEEEEEEEEEEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCC YKLGSFKEGKKFYLEILQRESKFIPAVTGLSEIYLVENDFKSINELIQPLLSEFPNHSGL CCCCCCCCHHHHHHHHHHHHCCCCCHHCCCEEEEEEECHHHHHHHHHHHHHHHCCCCCCC RITEAKSLLKQGKIDSALYKIKSLSEKLDEPSDLLRMLAELYFSKNHYEDALNTVDSYTK EEHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC KEPNDPSGFSFKAKVLLYQNYFKPDALLSILPLVKESLDNALNLDDKNEEARFYSVYHDL CCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH ILSNANNDKGLKTKAFKRIYELAREFPDNQMYHSLEANIAWELGETKFAAFHYRRALSLD HHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCHHHHHHHHHHCCCC DLDEVLRFEAEEYSIEFEKEESKLRRELGEYRKDRFYSEKHSLYHQSSLFHLFRARDLSA CHHHHHHHCHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QTPIIRRELLDFYNQSGDAVKYTNLLLRLREEDPNSFKLQNKLEFVIKNIKDSIEFKEGY CCHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHEECCCE IQIDANSVANHSVRFSPEVYVFDLESISPFPYHLQAGRLFAEAIRYQLKNMLSVRVIEGS EEEECCCCCCCCEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCC EFKQIRALLKESSYHPFSQTIPFTIDNLHHLDTKRRNATKIRYVVHGRYQIQNGDIKFEI HHHHHHHHHHHCCCCCCCCCCCEEECCHHHHCCCCCCCEEEEEEEEEEEEEECCCEEEEE SVYDRDLLKDIVTWKTNQRGRDSLPTIVHRIAERIKNTLPIEGKILKIKKDEVIISLGKD EECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEEEECCC DGLKPNSKLLFQRRGKTLFEGDILILGKSIASIKPKQRGWEKELATGDDVVLSKD CCCCCCHHHHHHHCCCEEECCCEEEEECHHHHCCCHHCCCHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA