| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221196
Identifier: 183221196
GI number: 183221196
Start: 1892152
End: 1892595
Strand: Direct
Name: 183221196
Synonym: LEPBI_I1810
Alternate gene names: NA
Gene position: 1892152-1892595 (Clockwise)
Preceding gene: 183221194
Following gene: 183221198
Centisome position: 52.56
GC content: 34.23
Gene sequence:
>444_bases TTGTTTGCCTTTCATGAAAGACCGATTGGATTTGAAACTTTGATGCAAGCAAATAAAGGCATTCGTGTCTTACAAAAACC GAATTCCCTTGCCGTCGGTGAAACGGCAGTTTTAAAAGTTCCCATCCTACCTTTCCTTTCCACGATTTGGATCGCAAAAC ACACAAAATACGAAAAAAACAAACTATTCCAAGACAACCAAGAAAAAGGCCCTTTTCTCAAATTTTTACATACACACCGA TTTTTGGATGTAGAAGGAAACACAAACCAATCCATTTTATCTGATGAAGTTCAAATCAATTTTTACGTATGGCCCATTTC TAAATACTTTCTTTATCCTATGTTATATTTGATGTTTCGAAAAAGGCATCAACTAACAGCTGATTTTTTATCTGTAAAAC ACAAATTAATTTTTAGCGGGTATACGAGATCCGTAATCAATTAA
Upstream 100 bases:
>100_bases TCTTTTTTTTGAAAAATAATGTCATTTTCTTACTTTCTCCCTTCTAAACATTATGGATACATTCATTTTCCAATCCCAAT TTCCAGTCAAACGCGAGGAT
Downstream 100 bases:
>100_bases CTGTCGATTGTATTCCTTATCCATTAGAGGAGAAGAAATCAAAAAATCAGCACTGGATCTATTGCATGCCATTGGAATAT TATACAATACTGCGATTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MFAFHERPIGFETLMQANKGIRVLQKPNSLAVGETAVLKVPILPFLSTIWIAKHTKYEKNKLFQDNQEKGPFLKFLHTHR FLDVEGNTNQSILSDEVQINFYVWPISKYFLYPMLYLMFRKRHQLTADFLSVKHKLIFSGYTRSVIN
Sequences:
>Translated_147_residues MFAFHERPIGFETLMQANKGIRVLQKPNSLAVGETAVLKVPILPFLSTIWIAKHTKYEKNKLFQDNQEKGPFLKFLHTHR FLDVEGNTNQSILSDEVQINFYVWPISKYFLYPMLYLMFRKRHQLTADFLSVKHKLIFSGYTRSVIN >Mature_147_residues MFAFHERPIGFETLMQANKGIRVLQKPNSLAVGETAVLKVPILPFLSTIWIAKHTKYEKNKLFQDNQEKGPFLKFLHTHR FLDVEGNTNQSILSDEVQINFYVWPISKYFLYPMLYLMFRKRHQLTADFLSVKHKLIFSGYTRSVIN
Specific function: Unknown
COG id: COG4276
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17310; Mature: 17310
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAFHERPIGFETLMQANKGIRVLQKPNSLAVGETAVLKVPILPFLSTIWIAKHTKYEKN CCCCCCCCCCHHHHHHCCCCEEEEECCCCEECCCEEEEEECHHHHHHHHHHHHCCCCHHH KLFQDNQEKGPFLKFLHTHRFLDVEGNTNQSILSDEVQINFYVWPISKYFLYPMLYLMFR HCCCCCCCCCHHHHHHHHHEEEECCCCCCCCEECCCEEEEEEEECHHHHHHHHHHHHHHH KRHQLTADFLSVKHKLIFSGYTRSVIN HHHHHHHHHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure MFAFHERPIGFETLMQANKGIRVLQKPNSLAVGETAVLKVPILPFLSTIWIAKHTKYEKN CCCCCCCCCCHHHHHHCCCCEEEEECCCCEECCCEEEEEECHHHHHHHHHHHHCCCCHHH KLFQDNQEKGPFLKFLHTHRFLDVEGNTNQSILSDEVQINFYVWPISKYFLYPMLYLMFR HCCCCCCCCCHHHHHHHHHEEEECCCCCCCCEECCCEEEEEEEECHHHHHHHHHHHHHHH KRHQLTADFLSVKHKLIFSGYTRSVIN HHHHHHHHHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA