| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220893
Identifier: 183220893
GI number: 183220893
Start: 1567519
End: 1569054
Strand: Reverse
Name: 183220893
Synonym: LEPBI_I1506
Alternate gene names: NA
Gene position: 1569054-1567519 (Counterclockwise)
Preceding gene: 183220897
Following gene: 183220892
Centisome position: 43.59
GC content: 40.43
Gene sequence:
>1536_bases ATGAAACGTTTTTTTCTATTCCTCTTACTTTCCGTTTTAATCCTAGTCGGTTGTAAAAAAGAAAAAGATGAAAGTAATTC ACTCAGTGCACTCGCTGTCCGATTTTTCATTCGCACTTTACTCTCTTCTAATATTAACTCTGAGTTACCTTCCAATTTGA GTGTGGCGGTTCCCAGATCCATACGTAAACCAAGCTCTGGACTAGGAGCAAGTTTCCAAAGAAGGTCCCAAACTTCTAAA ATGACTTTCACAAACAAAGGCATTGCTGAAGATACTTTGGATTATGGTTTCACAGGCCAATACTTTCTAACAGAAGGAAC GGGGATTGTGGCCGAAATCTTACGTGATTCCAAAAAAGATTTAGTACTCATCAGTGGATCCTATTCGATCGCCAAAGCCA GTCCTGGTGTTTGTATCCCTGGGGGAACTTCCAGTGTGCGGATCACACAAAGTATGGAAGAGGAATTTTTGGAAGGGATT GAAAGGCTCGGTCTTAGTTCCGAGGAGGCTCGCGGAGAGCTTGTTAGCCTACAAAATGAAGGGATTTTACCTTTCATTGG ACAATCTGTCCCGACTCCCGCCATGGTTTACCGAACCTTAAGTAATAATGAATATGATGTAGAAATTTCCTATTCATTTG CCGATGCGATTGGAACGCCACAACCTTGTCCTTCCAACAATCAATTCCAAAAAAGTATCAAATTCAAAAGTGACAAATCC AAAGTGTTTAGTTCCATCACTCGTTCCTTACGGGTATTTGGAATCTCTTTGAGTGTGGATGCCTCCATCACTTACATCAC CCAAGTCGGAAAAAAAGACAAAGCCATTCTCAATATCAAACAAGTGACATCGGGTTCCGGCAATACGGACAAATCCACAA CTCGTTTTACATTCGAAGAATGTGCCAACGATACCAGTGCCAACTCAAACAATTGTGTCACCTTAAATTATAGTAATGTT TATGATGATGCGGCAGGGAACAAAATCACCACTTCCGTCAAAGGAAGGACAAATGATTTAGGAGGTTATGTCCTCACCGA ATACATCGATAATGCAGATAATTTTGAATACTATATCACTGAGACCTATGATCCGAATGGAGAAATCACCTATTTTGCTG TCGATTATTATGATATCGATAATAGTGCAAATGATGAATATGAAGAATTGGGAGTCCTTGATACGGAGCTCTATGGAGAC TTCATTGAAACAACCTATACCTTTGAATGGGACGTGTATGTTGATTTTACAACTCCTTTACCCAGTGGAGGTATCGGTGG AGGTGGTTATGCTGCCTATGATGCCTTTGTGATCATGCCAAATGGAGTGAACCCAAACTCGTTTCCAGATGAATTCATCG GTTGGGGTGAGTTTTACATCAATGAGTCTGATTCGAGTGAAACTTACTATGTTGATTTTTACGGTTCAGCCGATCAAGTC AGCAATGCCGATGTATGGCGCTATGAAATTGATACGAACGGCAATGAAGTGTATACACAACTTTTGATCGCACCAAATGT ATTATACCAATTATAA
Upstream 100 bases:
>100_bases TTTCCATTGAATCTGTGTGTGATTCAAACTTTGGAAACTCTTTTTTTAATTTTGACTTTCGAATTGACAATCCAAGTCGT ACCATTCTGATGATGGACTG
Downstream 100 bases:
>100_bases ATGAAACTAACAGATTCTATTGACGATCAAAACAAAAAACCTTTGCGAAATCTTATGTTTAAAAACAATTCACTCGTGTC CAAAATATCGCTGAAACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 511; Mature: 511
Protein sequence:
>511_residues MKRFFLFLLLSVLILVGCKKEKDESNSLSALAVRFFIRTLLSSNINSELPSNLSVAVPRSIRKPSSGLGASFQRRSQTSK MTFTNKGIAEDTLDYGFTGQYFLTEGTGIVAEILRDSKKDLVLISGSYSIAKASPGVCIPGGTSSVRITQSMEEEFLEGI ERLGLSSEEARGELVSLQNEGILPFIGQSVPTPAMVYRTLSNNEYDVEISYSFADAIGTPQPCPSNNQFQKSIKFKSDKS KVFSSITRSLRVFGISLSVDASITYITQVGKKDKAILNIKQVTSGSGNTDKSTTRFTFEECANDTSANSNNCVTLNYSNV YDDAAGNKITTSVKGRTNDLGGYVLTEYIDNADNFEYYITETYDPNGEITYFAVDYYDIDNSANDEYEELGVLDTELYGD FIETTYTFEWDVYVDFTTPLPSGGIGGGGYAAYDAFVIMPNGVNPNSFPDEFIGWGEFYINESDSSETYYVDFYGSADQV SNADVWRYEIDTNGNEVYTQLLIAPNVLYQL
Sequences:
>Translated_511_residues MKRFFLFLLLSVLILVGCKKEKDESNSLSALAVRFFIRTLLSSNINSELPSNLSVAVPRSIRKPSSGLGASFQRRSQTSK MTFTNKGIAEDTLDYGFTGQYFLTEGTGIVAEILRDSKKDLVLISGSYSIAKASPGVCIPGGTSSVRITQSMEEEFLEGI ERLGLSSEEARGELVSLQNEGILPFIGQSVPTPAMVYRTLSNNEYDVEISYSFADAIGTPQPCPSNNQFQKSIKFKSDKS KVFSSITRSLRVFGISLSVDASITYITQVGKKDKAILNIKQVTSGSGNTDKSTTRFTFEECANDTSANSNNCVTLNYSNV YDDAAGNKITTSVKGRTNDLGGYVLTEYIDNADNFEYYITETYDPNGEITYFAVDYYDIDNSANDEYEELGVLDTELYGD FIETTYTFEWDVYVDFTTPLPSGGIGGGGYAAYDAFVIMPNGVNPNSFPDEFIGWGEFYINESDSSETYYVDFYGSADQV SNADVWRYEIDTNGNEVYTQLLIAPNVLYQL >Mature_511_residues MKRFFLFLLLSVLILVGCKKEKDESNSLSALAVRFFIRTLLSSNINSELPSNLSVAVPRSIRKPSSGLGASFQRRSQTSK MTFTNKGIAEDTLDYGFTGQYFLTEGTGIVAEILRDSKKDLVLISGSYSIAKASPGVCIPGGTSSVRITQSMEEEFLEGI ERLGLSSEEARGELVSLQNEGILPFIGQSVPTPAMVYRTLSNNEYDVEISYSFADAIGTPQPCPSNNQFQKSIKFKSDKS KVFSSITRSLRVFGISLSVDASITYITQVGKKDKAILNIKQVTSGSGNTDKSTTRFTFEECANDTSANSNNCVTLNYSNV YDDAAGNKITTSVKGRTNDLGGYVLTEYIDNADNFEYYITETYDPNGEITYFAVDYYDIDNSANDEYEELGVLDTELYGD FIETTYTFEWDVYVDFTTPLPSGGIGGGGYAAYDAFVIMPNGVNPNSFPDEFIGWGEFYINESDSSETYYVDFYGSADQV SNADVWRYEIDTNGNEVYTQLLIAPNVLYQL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56443; Mature: 56443
Theoretical pI: Translated: 4.14; Mature: 4.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFFLFLLLSVLILVGCKKEKDESNSLSALAVRFFIRTLLSSNINSELPSNLSVAVPRS CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHH IRKPSSGLGASFQRRSQTSKMTFTNKGIAEDTLDYGFTGQYFLTEGTGIVAEILRDSKKD HCCCCCCCCCHHHHHCCCCEEEEECCCCCHHHHCCCCCCCEEEECCCHHHHHHHHCCCCC LVLISGSYSIAKASPGVCIPGGTSSVRITQSMEEEFLEGIERLGLSSEEARGELVSLQNE EEEEECCCEEEECCCCEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCC GILPFIGQSVPTPAMVYRTLSNNEYDVEISYSFADAIGTPQPCPSNNQFQKSIKFKSDKS CCCCCCCCCCCCHHHEEEECCCCEEEEEEEEEEHHHCCCCCCCCCCCHHHHHHCCCCHHH KVFSSITRSLRVFGISLSVDASITYITQVGKKDKAILNIKQVTSGSGNTDKSTTRFTFEE HHHHHHHHCEEEEEEEEEECCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEEHHH CANDTSANSNNCVTLNYSNVYDDAAGNKITTSVKGRTNDLGGYVLTEYIDNADNFEYYIT HCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEHHHHHCCCCCEEEEEE ETYDPNGEITYFAVDYYDIDNSANDEYEELGVLDTELYGDFIETTYTFEWDVYVDFTTPL EEECCCCCEEEEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHEEEEEEEEEEEEEECCC PSGGIGGGGYAAYDAFVIMPNGVNPNSFPDEFIGWGEFYINESDSSETYYVDFYGSADQV CCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHCCCCEEEEECCCCCCEEEEEEECCCCCC SNADVWRYEIDTNGNEVYTQLLIAPNVLYQL CCCEEEEEEECCCCCEEEEEEEECCHHHHCC >Mature Secondary Structure MKRFFLFLLLSVLILVGCKKEKDESNSLSALAVRFFIRTLLSSNINSELPSNLSVAVPRS CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCHH IRKPSSGLGASFQRRSQTSKMTFTNKGIAEDTLDYGFTGQYFLTEGTGIVAEILRDSKKD HCCCCCCCCCHHHHHCCCCEEEEECCCCCHHHHCCCCCCCEEEECCCHHHHHHHHCCCCC LVLISGSYSIAKASPGVCIPGGTSSVRITQSMEEEFLEGIERLGLSSEEARGELVSLQNE EEEEECCCEEEECCCCEEECCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHCCCEEEECCC GILPFIGQSVPTPAMVYRTLSNNEYDVEISYSFADAIGTPQPCPSNNQFQKSIKFKSDKS CCCCCCCCCCCCHHHEEEECCCCEEEEEEEEEEHHHCCCCCCCCCCCHHHHHHCCCCHHH KVFSSITRSLRVFGISLSVDASITYITQVGKKDKAILNIKQVTSGSGNTDKSTTRFTFEE HHHHHHHHCEEEEEEEEEECCEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCEEEEHHH CANDTSANSNNCVTLNYSNVYDDAAGNKITTSVKGRTNDLGGYVLTEYIDNADNFEYYIT HCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCEEHHHHHCCCCCEEEEEE ETYDPNGEITYFAVDYYDIDNSANDEYEELGVLDTELYGDFIETTYTFEWDVYVDFTTPL EEECCCCCEEEEEEEEEECCCCCCCCHHHCCCCHHHHHHHHHHEEEEEEEEEEEEEECCC PSGGIGGGGYAAYDAFVIMPNGVNPNSFPDEFIGWGEFYINESDSSETYYVDFYGSADQV CCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHCCCCEEEEECCCCCCEEEEEEECCCCCC SNADVWRYEIDTNGNEVYTQLLIAPNVLYQL CCCEEEEEEECCCCCEEEEEEEECCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA