| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220897
Identifier: 183220897
GI number: 183220897
Start: 1574407
End: 1575915
Strand: Reverse
Name: 183220897
Synonym: LEPBI_I1510
Alternate gene names: NA
Gene position: 1575915-1574407 (Counterclockwise)
Preceding gene: 183220901
Following gene: 183220893
Centisome position: 43.78
GC content: 40.89
Gene sequence:
>1509_bases ATGGTAAAACGACTGATGGCGGTTTTTGTGATTTCCACGGTGGTTCTTTTGGGAAACCTCTATGGACAGGAAGCCATTCC CGAACCTGGCTGTATCAAGGACCCTCCTCCGAAAAACCTTCCCTTTCCCATGGACGTGTCCAAACAACTTTGTAAGAAGG ACATTGAAGACAAAAATGACGGTTGGTACCCAACGGGATTACCACTCATCAATTCGGATCCCAATGAAGGGATTGGTTAC GGCGCAAGAGCCTATATCTACAATAACGGTCCCAAAACAGATCCTTTGTTTTATTATACGCCTTACCGAATGCGACTCTT TGCTCAGTATTTTAATACGAATAAAAATGCGCAGTACCACCAAATCAGTTTGGATATGCCGTTTATAAAGGATACCGAAT GGAGAATTAGGGCTGATGCATTTCTCACCATTACACCCACAACTTTGTATTTTGGAATTGGTGAATCGAGCATGAATCCT CTTTCCTACTTAGATCGAAACCAACCATTCAATCGACAAGTAAGGAATGCCAGTTTTATTGACCAAGAAACAAATCTCAC ATTCTACAGACCTGGCACAAGTTCTGATCCATTCCAAATCGGTGGAAAAACATTGTCTGGAATTCCACAAACTCCCGGTT ATGTGGTGACAGACAAAATGTACAATCGATATACGATTGAAACTCCAATGGCAACTGTGAGCGCAGAAAGATCATTTGTT GGCGGAACAGTTAGACTCGTTTCTGGTTTGAAATTTTCGAACAATATCATTCGAACCTATGATGGAAAGATGGTGAGAGG TGTGGATCCAACTTTTGACCAATTGACAGCAGATGTTCCCAATGGAAAAACACGATTAACAGAAGACCATGAAGCAAAAA AAATCATAGGTTACCAAGGTGGCTATGTAAACGCAGTACGGCTTGGGATCGTTTATGATACAAGGGACTTTGAACCTGAC CCCAATTCCGGAATTTTTGCTGAGGTCACCTATGAAAAACATGACAAAGCCATGGGTTCAAACTATCAGTTTCAAAAATA CTTTGCACAAACTAAATTGTTTTGGAGCCCCTTTCCAAAGTTAGTTGATAAATTAGTGATTGCCAATCGTTTTGGACTCG GAGTGACGGAAGGTGAATCCCCATTTTTTGAATATCGAAATATGTGGGGAACAGAAGGACTTGTTGGAGGACTTGGTGGA CTTAGAACTCTACGGGGATACAAACAAGATCGTTTTGTAGGCCGTGCCATGGGATGGGGCAATTCGGAAATCCGATGGAA ATTTGCAGAAGCAAAAATTGGATCGGAATTTTTCGCCTTCAATATTGTACCATTTTTTGATTATGGTCGAGTTTGGGACG ATGAACATAAAATTAACTTAAAGAACTATTTTTATTCTCGAGGGATTGGTCTACGGATTGCTTGGAACCAAGCCACCATC ATTATGATCGATTACGCAAAATCGAGAGAAGACGAACAAGTTTTTGTCAATTTTAGTCATGTCTTCTAA
Upstream 100 bases:
>100_bases AAAAAGAGTCCAAAAATTGAGTGAGTGCTCACTTTTTTCATTGACAGAGGGTGCAAATCGTCCAGTTTCCTCCTCTTATG AGATATAAAGGGAGAATCGT
Downstream 100 bases:
>100_bases ATCTTAAAAAAATCAATCGTCTTTCTTAAGTTCGATGCTTTTGCAGACAAAGCGGCACAAAGTTTATCGATATCATTGAC AAATTGATTTAAGTATTCTG
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MVKRLMAVFVISTVVLLGNLYGQEAIPEPGCIKDPPPKNLPFPMDVSKQLCKKDIEDKNDGWYPTGLPLINSDPNEGIGY GARAYIYNNGPKTDPLFYYTPYRMRLFAQYFNTNKNAQYHQISLDMPFIKDTEWRIRADAFLTITPTTLYFGIGESSMNP LSYLDRNQPFNRQVRNASFIDQETNLTFYRPGTSSDPFQIGGKTLSGIPQTPGYVVTDKMYNRYTIETPMATVSAERSFV GGTVRLVSGLKFSNNIIRTYDGKMVRGVDPTFDQLTADVPNGKTRLTEDHEAKKIIGYQGGYVNAVRLGIVYDTRDFEPD PNSGIFAEVTYEKHDKAMGSNYQFQKYFAQTKLFWSPFPKLVDKLVIANRFGLGVTEGESPFFEYRNMWGTEGLVGGLGG LRTLRGYKQDRFVGRAMGWGNSEIRWKFAEAKIGSEFFAFNIVPFFDYGRVWDDEHKINLKNYFYSRGIGLRIAWNQATI IMIDYAKSREDEQVFVNFSHVF
Sequences:
>Translated_502_residues MVKRLMAVFVISTVVLLGNLYGQEAIPEPGCIKDPPPKNLPFPMDVSKQLCKKDIEDKNDGWYPTGLPLINSDPNEGIGY GARAYIYNNGPKTDPLFYYTPYRMRLFAQYFNTNKNAQYHQISLDMPFIKDTEWRIRADAFLTITPTTLYFGIGESSMNP LSYLDRNQPFNRQVRNASFIDQETNLTFYRPGTSSDPFQIGGKTLSGIPQTPGYVVTDKMYNRYTIETPMATVSAERSFV GGTVRLVSGLKFSNNIIRTYDGKMVRGVDPTFDQLTADVPNGKTRLTEDHEAKKIIGYQGGYVNAVRLGIVYDTRDFEPD PNSGIFAEVTYEKHDKAMGSNYQFQKYFAQTKLFWSPFPKLVDKLVIANRFGLGVTEGESPFFEYRNMWGTEGLVGGLGG LRTLRGYKQDRFVGRAMGWGNSEIRWKFAEAKIGSEFFAFNIVPFFDYGRVWDDEHKINLKNYFYSRGIGLRIAWNQATI IMIDYAKSREDEQVFVNFSHVF >Mature_502_residues MVKRLMAVFVISTVVLLGNLYGQEAIPEPGCIKDPPPKNLPFPMDVSKQLCKKDIEDKNDGWYPTGLPLINSDPNEGIGY GARAYIYNNGPKTDPLFYYTPYRMRLFAQYFNTNKNAQYHQISLDMPFIKDTEWRIRADAFLTITPTTLYFGIGESSMNP LSYLDRNQPFNRQVRNASFIDQETNLTFYRPGTSSDPFQIGGKTLSGIPQTPGYVVTDKMYNRYTIETPMATVSAERSFV GGTVRLVSGLKFSNNIIRTYDGKMVRGVDPTFDQLTADVPNGKTRLTEDHEAKKIIGYQGGYVNAVRLGIVYDTRDFEPD PNSGIFAEVTYEKHDKAMGSNYQFQKYFAQTKLFWSPFPKLVDKLVIANRFGLGVTEGESPFFEYRNMWGTEGLVGGLGG LRTLRGYKQDRFVGRAMGWGNSEIRWKFAEAKIGSEFFAFNIVPFFDYGRVWDDEHKINLKNYFYSRGIGLRIAWNQATI IMIDYAKSREDEQVFVNFSHVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57316; Mature: 57316
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKRLMAVFVISTVVLLGNLYGQEAIPEPGCIKDPPPKNLPFPMDVSKQLCKKDIEDKND CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC GWYPTGLPLINSDPNEGIGYGARAYIYNNGPKTDPLFYYTPYRMRLFAQYFNTNKNAQYH CCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEE QISLDMPFIKDTEWRIRADAFLTITPTTLYFGIGESSMNPLSYLDRNQPFNRQVRNASFI EEEECCCCCCCCCEEEEEEEEEEEECCEEEEECCCCCCCHHHHHCCCCCCCHHHCCCCCC DQETNLTFYRPGTSSDPFQIGGKTLSGIPQTPGYVVTDKMYNRYTIETPMATVSAERSFV CCCCCEEEECCCCCCCCCEECCEEECCCCCCCCEEEECCCCCEEEEECCCEEHCCCCHHC GGTVRLVSGLKFSNNIIRTYDGKMVRGVDPTFDQLTADVPNGKTRLTEDHEAKKIIGYQG CCEEEEEECCCCCCCEEEECCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCC GYVNAVRLGIVYDTRDFEPDPNSGIFAEVTYEKHDKAMGSNYQFQKYFAQTKLFWSPFPK CEEEEEEEEEEEECCCCCCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHHCHHHH LVDKLVIANRFGLGVTEGESPFFEYRNMWGTEGLVGGLGGLRTLRGYKQDRFVGRAMGWG HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCC NSEIRWKFAEAKIGSEFFAFNIVPFFDYGRVWDDEHKINLKNYFYSRGIGLRIAWNQATI CCCEEEEEECCCCCCEEEEEEEEEEECCCCEECCCCEEEHHHHHEECCCEEEEEECCEEE IMIDYAKSREDEQVFVNFSHVF EEEEECCCCCCCEEEEEEEECC >Mature Secondary Structure MVKRLMAVFVISTVVLLGNLYGQEAIPEPGCIKDPPPKNLPFPMDVSKQLCKKDIEDKND CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC GWYPTGLPLINSDPNEGIGYGARAYIYNNGPKTDPLFYYTPYRMRLFAQYFNTNKNAQYH CCCCCCCCEECCCCCCCCCCCEEEEEECCCCCCCCEEEECCHHHHHHHHHHCCCCCCEEE QISLDMPFIKDTEWRIRADAFLTITPTTLYFGIGESSMNPLSYLDRNQPFNRQVRNASFI EEEECCCCCCCCCEEEEEEEEEEEECCEEEEECCCCCCCHHHHHCCCCCCCHHHCCCCCC DQETNLTFYRPGTSSDPFQIGGKTLSGIPQTPGYVVTDKMYNRYTIETPMATVSAERSFV CCCCCEEEECCCCCCCCCEECCEEECCCCCCCCEEEECCCCCEEEEECCCEEHCCCCHHC GGTVRLVSGLKFSNNIIRTYDGKMVRGVDPTFDQLTADVPNGKTRLTEDHEAKKIIGYQG CCEEEEEECCCCCCCEEEECCCEEEECCCCCHHHHCCCCCCCCCCCCCCCCCCEEEECCC GYVNAVRLGIVYDTRDFEPDPNSGIFAEVTYEKHDKAMGSNYQFQKYFAQTKLFWSPFPK CEEEEEEEEEEEECCCCCCCCCCCEEEEEEECHHHHHCCCCCHHHHHHHHHHHHHCHHHH LVDKLVIANRFGLGVTEGESPFFEYRNMWGTEGLVGGLGGLRTLRGYKQDRFVGRAMGWG HHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCC NSEIRWKFAEAKIGSEFFAFNIVPFFDYGRVWDDEHKINLKNYFYSRGIGLRIAWNQATI CCCEEEEEECCCCCCEEEEEEEEEEECCCCEECCCCEEEHHHHHEECCCEEEEEECCEEE IMIDYAKSREDEQVFVNFSHVF EEEEECCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA