| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220892
Identifier: 183220892
GI number: 183220892
Start: 1565956
End: 1567518
Strand: Reverse
Name: 183220892
Synonym: LEPBI_I1505
Alternate gene names: NA
Gene position: 1567518-1565956 (Counterclockwise)
Preceding gene: 183220893
Following gene: 183220888
Centisome position: 43.55
GC content: 42.55
Gene sequence:
>1563_bases ATGAAACTAACAGATTCTATTGACGATCAAAACAAAAAACCTTTGCGAAATCTTATGTTTAAAAACAATTCACTCGTGTC CAAAATATCGCTGAAACCACACATATGGTTTCATTCTTTTTTTTCGCTTACATTTGTTTCCCTCCAATATTTGATTCCGA ATCCTGTATTCCCTTCCGAACCCTTTCACAACTTACAAGGGTTTTATGGGGAACGGGCCGCAGGTCTTGCGGGTGCCTTT ACGGCCATTGCCGATGACCCTTCAGGTGCTTATTACAACCCGGCTGGACTTGGGTTTACGCATAATGATGGGATTTCCAT TTCTGCGAGTAATTTCAAAGATGTGAAACGCAGTTACATCAATATTGACACACCAGGCCAACGATACAACCAAACCCACC AAGGATTTGATCCCAATTTTATTGGACTTCTGAAAAACTTTGATCGTTGGAAGTTTGCGTTTTCCATCGTCAACACTTAC AATTATTCCTACAACCGAGTCGACCAAGTGAATTACCCGCTTGTCTCCCCTTCGATCAATTCCACAAGAAATTATACCAA AGAACGGTACAACCAACTCCTTGTTGGCCCAAGTTTGGCTTACTTACTCAACGATAAACTCTCAGTTGGCGCAACACTCT ATTATATGAGTGATACCAAAGAAGTTTCGAGAACCCAGTTCCAACAATTTTCTGATTTGAGTTATGTGATGCGATCCTAT GTTGACAATCGTCGCACAACAGGCATTATGCCGGTCCTTGGTGTTCAGTACCAGCCAAATCCCAAAGTTTCCCTAGGGAT GAGTTATCGGCGTATTTTTGTGACCGGTGGGGACAGACTGTACAACGAAGTGTATGCGGATTCAACAAGAAGACCAGGAT CATCCGCAATTGACTTCATTGAAGGGACAGGAGACGGTGCCTCTTCCATTGAACAAGGAGTTCTCACCCAAAAACCGAAA CTCGTAACATCCATTCCGCAAACATCGGAAATGCGATTTGGTGTGGCATTTTTTCCAACATCCAGATTCCTTGCATCCTT TGATATGATTTATACCTCAGGTTATAAAGTCAGACGTAACCAAGATGAAATCAGCAATTTTGGCAGGAGAGTCACCTACA CAATCAATGATACAGAGGTACGTGAGCTCACTCGTTTTGCGACTACCAATTTTGCAGCAGGGATGGAATATTACTTAGCC GACACCTTTTCAATATTAGGTGGTATTTACACAAACGAACCCAATACAAAACCAGTTTCTTGGACCGAATCAGCAGTGGA TTTGTATTTGCAAAATACTTTTGGGAACCAAGTCACTGCAAACTCTGGGGATGCCAGTGTCATCTACAAAGTAGCTAGGT CTGGAACGAACCCAAGGAATGAATATTCAAGGAACCGGGGTTTGAGTTTAGGATTTTCTTGGGTGACATCCAAATCATCT GTATCCGTGACCTACATCCGTGAACTTGGGTATGGGAATTCAAGGATCGACCCCAATTCCCTTGCCCAATCATTTGAATA CAGTGCCCATTCCATTTACATCATGGTGAGCTCAAGGAACTAA
Upstream 100 bases:
>100_bases AGTCAGCAATGCCGATGTATGGCGCTATGAAATTGATACGAACGGCAATGAAGTGTATACACAACTTTTGATCGCACCAA ATGTATTATACCAATTATAA
Downstream 100 bases:
>100_bases AGGTTACTTCTTTTGGGATTTTTTTTGGAAAAAATCCCTGGCATCTTCATAACCCTGGGCCAAAAGTTTTTCTGCTTGTT CCTTTTTAAAATTTAAGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MKLTDSIDDQNKKPLRNLMFKNNSLVSKISLKPHIWFHSFFSLTFVSLQYLIPNPVFPSEPFHNLQGFYGERAAGLAGAF TAIADDPSGAYYNPAGLGFTHNDGISISASNFKDVKRSYINIDTPGQRYNQTHQGFDPNFIGLLKNFDRWKFAFSIVNTY NYSYNRVDQVNYPLVSPSINSTRNYTKERYNQLLVGPSLAYLLNDKLSVGATLYYMSDTKEVSRTQFQQFSDLSYVMRSY VDNRRTTGIMPVLGVQYQPNPKVSLGMSYRRIFVTGGDRLYNEVYADSTRRPGSSAIDFIEGTGDGASSIEQGVLTQKPK LVTSIPQTSEMRFGVAFFPTSRFLASFDMIYTSGYKVRRNQDEISNFGRRVTYTINDTEVRELTRFATTNFAAGMEYYLA DTFSILGGIYTNEPNTKPVSWTESAVDLYLQNTFGNQVTANSGDASVIYKVARSGTNPRNEYSRNRGLSLGFSWVTSKSS VSVTYIRELGYGNSRIDPNSLAQSFEYSAHSIYIMVSSRN
Sequences:
>Translated_520_residues MKLTDSIDDQNKKPLRNLMFKNNSLVSKISLKPHIWFHSFFSLTFVSLQYLIPNPVFPSEPFHNLQGFYGERAAGLAGAF TAIADDPSGAYYNPAGLGFTHNDGISISASNFKDVKRSYINIDTPGQRYNQTHQGFDPNFIGLLKNFDRWKFAFSIVNTY NYSYNRVDQVNYPLVSPSINSTRNYTKERYNQLLVGPSLAYLLNDKLSVGATLYYMSDTKEVSRTQFQQFSDLSYVMRSY VDNRRTTGIMPVLGVQYQPNPKVSLGMSYRRIFVTGGDRLYNEVYADSTRRPGSSAIDFIEGTGDGASSIEQGVLTQKPK LVTSIPQTSEMRFGVAFFPTSRFLASFDMIYTSGYKVRRNQDEISNFGRRVTYTINDTEVRELTRFATTNFAAGMEYYLA DTFSILGGIYTNEPNTKPVSWTESAVDLYLQNTFGNQVTANSGDASVIYKVARSGTNPRNEYSRNRGLSLGFSWVTSKSS VSVTYIRELGYGNSRIDPNSLAQSFEYSAHSIYIMVSSRN >Mature_520_residues MKLTDSIDDQNKKPLRNLMFKNNSLVSKISLKPHIWFHSFFSLTFVSLQYLIPNPVFPSEPFHNLQGFYGERAAGLAGAF TAIADDPSGAYYNPAGLGFTHNDGISISASNFKDVKRSYINIDTPGQRYNQTHQGFDPNFIGLLKNFDRWKFAFSIVNTY NYSYNRVDQVNYPLVSPSINSTRNYTKERYNQLLVGPSLAYLLNDKLSVGATLYYMSDTKEVSRTQFQQFSDLSYVMRSY VDNRRTTGIMPVLGVQYQPNPKVSLGMSYRRIFVTGGDRLYNEVYADSTRRPGSSAIDFIEGTGDGASSIEQGVLTQKPK LVTSIPQTSEMRFGVAFFPTSRFLASFDMIYTSGYKVRRNQDEISNFGRRVTYTINDTEVRELTRFATTNFAAGMEYYLA DTFSILGGIYTNEPNTKPVSWTESAVDLYLQNTFGNQVTANSGDASVIYKVARSGTNPRNEYSRNRGLSLGFSWVTSKSS VSVTYIRELGYGNSRIDPNSLAQSFEYSAHSIYIMVSSRN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58639; Mature: 58639
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTDSIDDQNKKPLRNLMFKNNSLVSKISLKPHIWFHSFFSLTFVSLQYLIPNPVFPSE CCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC PFHNLQGFYGERAAGLAGAFTAIADDPSGAYYNPAGLGFTHNDGISISASNFKDVKRSYI CHHHHHHHCCCHHHCHHHHHHEECCCCCCCEECCCCCCEECCCCEEEECCCHHHHHHHEE NIDTPGQRYNQTHQGFDPNFIGLLKNFDRWKFAFSIVNTYNYSYNRVDQVNYPLVSPSIN CCCCCCHHHCCCCCCCCCCHHHHHHCCCHHHEEEEEHHHCCCCCCCCCCCCCCEECCCCC STRNYTKERYNQLLVGPSLAYLLNDKLSVGATLYYMSDTKEVSRTQFQQFSDLSYVMRSY CHHHHHHHHHHEEECCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH VDNRRTTGIMPVLGVQYQPNPKVSLGMSYRRIFVTGGDRLYNEVYADSTRRPGSSAIDFI HCCCCCCCCCEEECCEECCCCCEEECCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCEE EGTGDGASSIEQGVLTQKPKLVTSIPQTSEMRFGVAFFPTSRFLASFDMIYTSGYKVRRN ECCCCCHHHHHHCHHCCCCCCEECCCCCCCCEEEEEECCHHHHHHHHHHHEECCEEEECC QDEISNFGRRVTYTINDTEVRELTRFATTNFAAGMEYYLADTFSILGGIYTNEPNTKPVS HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEECCCCCCCCCC WTESAVDLYLQNTFGNQVTANSGDASVIYKVARSGTNPRNEYSRNRGLSLGFSWVTSKSS CCHHHHEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEEECCCC VSVTYIRELGYGNSRIDPNSLAQSFEYSAHSIYIMVSSRN EEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCC >Mature Secondary Structure MKLTDSIDDQNKKPLRNLMFKNNSLVSKISLKPHIWFHSFFSLTFVSLQYLIPNPVFPSE CCCCCCCCCCCCCHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCC PFHNLQGFYGERAAGLAGAFTAIADDPSGAYYNPAGLGFTHNDGISISASNFKDVKRSYI CHHHHHHHCCCHHHCHHHHHHEECCCCCCCEECCCCCCEECCCCEEEECCCHHHHHHHEE NIDTPGQRYNQTHQGFDPNFIGLLKNFDRWKFAFSIVNTYNYSYNRVDQVNYPLVSPSIN CCCCCCHHHCCCCCCCCCCHHHHHHCCCHHHEEEEEHHHCCCCCCCCCCCCCCEECCCCC STRNYTKERYNQLLVGPSLAYLLNDKLSVGATLYYMSDTKEVSRTQFQQFSDLSYVMRSY CHHHHHHHHHHEEECCCCCHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH VDNRRTTGIMPVLGVQYQPNPKVSLGMSYRRIFVTGGDRLYNEVYADSTRRPGSSAIDFI HCCCCCCCCCEEECCEECCCCCEEECCEEEEEEEECCHHHHHHHHHCCCCCCCCCCCCEE EGTGDGASSIEQGVLTQKPKLVTSIPQTSEMRFGVAFFPTSRFLASFDMIYTSGYKVRRN ECCCCCHHHHHHCHHCCCCCCEECCCCCCCCEEEEEECCHHHHHHHHHHHEECCEEEECC QDEISNFGRRVTYTINDTEVRELTRFATTNFAAGMEYYLADTFSILGGIYTNEPNTKPVS HHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCEECCCCCCCCCC WTESAVDLYLQNTFGNQVTANSGDASVIYKVARSGTNPRNEYSRNRGLSLGFSWVTSKSS CCHHHHEEEEECCCCCEEECCCCCHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEEECCCC VSVTYIRELGYGNSRIDPNSLAQSFEYSAHSIYIMVSSRN EEEEEEECCCCCCCCCCHHHHHHHHCCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA