| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220881
Identifier: 183220881
GI number: 183220881
Start: 1555469
End: 1556428
Strand: Reverse
Name: 183220881
Synonym: LEPBI_I1494
Alternate gene names: NA
Gene position: 1556428-1555469 (Counterclockwise)
Preceding gene: 183220882
Following gene: 183220880
Centisome position: 43.24
GC content: 38.85
Gene sequence:
>960_bases ATGAGAAAATTAATTTTTGGAATTATCGTTTCAGGCATTGCCATTTATTTTTTACAAAAGAACTTTGATATCAGTGAATT CGAACGACTAGAAGGAAAAGTCAATTGGTGGATTTTTCCTCTTCTAATCCTATCCAATTTATGGGCATTTATTCCTTTTT CGATTCGATGGTATCATCTACTCGAGAAAAAAATCACATTTCACCAATCCTTTTCCACAGCCATCATTGGTGTGGGTTTG AACATGGTGTTACCTGCTCGAGGTGGGGATTTGGTAAGATTACTGATGAACAAACGAGATTCGGATCTCCCCCTCACTCA CCTTCTCAGCCGAATCTTCTTAGAAAAAGTAATGGATTTGGGTTCCGTAGTTGTCATCGGTGCCACAGCTCTTTTTTATA TGGGGCTTGGACAATCCAAAAATTTAAGCCTTCTTTTGATTTCCAGTTTGGTCATTATTGGGATGTTGGTTGGTCTAATT TTGGTAAAATATTTTTTATTTTTCTTAAGATCAGTCGCTCTCAAATGTTTTTCACTTATCGGCAAACAATCATTATATGA AACGAAACTCGACCACCATTTGGTAGAATTTTCGGAATTTTTGCAAGGGGATAAACTCATCAAACCACTTGCCTATTCAT TACCAACATGGGTTTTTGGTTATGCGATTTCTTATTATCTTGCAGGGATGCTCATTGGTATGCCTATTTCCTTTCCGGAG GCATTGTTATTTATGTTTTTAGGTGGGATGGGAGTTGCCATTCCTTCCGCTCCTTCGGGCATAGGTGTGTTCCACGCTGC CATCATTTCTGGATTTATCATTTTAGGTAGAGATCCTGGGGAAGGTCTTGTCTATGCAACAGTAGTCCATTTGACCCAGT TTCTCATCACCACAGTCCTTGCCTGTTTTGCCTATCTTGTTTGGCGCCTCTCACATCAAAAAAACATGAGAATCAACTAA
Upstream 100 bases:
>100_bases AATTGTGGAACCTACGGTGGACAAACTGTTGGTCATCTACACTTCCACTTGTTAGGTGGCAGACATCTACAATGGCCACC AGGATAAAATTGAACCTACA
Downstream 100 bases:
>100_bases TTTTTTTTACTCAAAGATCCCCTCTTCCAATCTAAACTTTGATGGAAGAGAGGAAAAATTCATTCTTACTTAAAAACAAA AATTGGCATCAATGCTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MRKLIFGIIVSGIAIYFLQKNFDISEFERLEGKVNWWIFPLLILSNLWAFIPFSIRWYHLLEKKITFHQSFSTAIIGVGL NMVLPARGGDLVRLLMNKRDSDLPLTHLLSRIFLEKVMDLGSVVVIGATALFYMGLGQSKNLSLLLISSLVIIGMLVGLI LVKYFLFFLRSVALKCFSLIGKQSLYETKLDHHLVEFSEFLQGDKLIKPLAYSLPTWVFGYAISYYLAGMLIGMPISFPE ALLFMFLGGMGVAIPSAPSGIGVFHAAIISGFIILGRDPGEGLVYATVVHLTQFLITTVLACFAYLVWRLSHQKNMRIN
Sequences:
>Translated_319_residues MRKLIFGIIVSGIAIYFLQKNFDISEFERLEGKVNWWIFPLLILSNLWAFIPFSIRWYHLLEKKITFHQSFSTAIIGVGL NMVLPARGGDLVRLLMNKRDSDLPLTHLLSRIFLEKVMDLGSVVVIGATALFYMGLGQSKNLSLLLISSLVIIGMLVGLI LVKYFLFFLRSVALKCFSLIGKQSLYETKLDHHLVEFSEFLQGDKLIKPLAYSLPTWVFGYAISYYLAGMLIGMPISFPE ALLFMFLGGMGVAIPSAPSGIGVFHAAIISGFIILGRDPGEGLVYATVVHLTQFLITTVLACFAYLVWRLSHQKNMRIN >Mature_319_residues MRKLIFGIIVSGIAIYFLQKNFDISEFERLEGKVNWWIFPLLILSNLWAFIPFSIRWYHLLEKKITFHQSFSTAIIGVGL NMVLPARGGDLVRLLMNKRDSDLPLTHLLSRIFLEKVMDLGSVVVIGATALFYMGLGQSKNLSLLLISSLVIIGMLVGLI LVKYFLFFLRSVALKCFSLIGKQSLYETKLDHHLVEFSEFLQGDKLIKPLAYSLPTWVFGYAISYYLAGMLIGMPISFPE ALLFMFLGGMGVAIPSAPSGIGVFHAAIISGFIILGRDPGEGLVYATVVHLTQFLITTVLACFAYLVWRLSHQKNMRIN
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35808; Mature: 35808
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKLIFGIIVSGIAIYFLQKNFDISEFERLEGKVNWWIFPLLILSNLWAFIPFSIRWYHL CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEKKITFHQSFSTAIIGVGLNMVLPARGGDLVRLLMNKRDSDLPLTHLLSRIFLEKVMDL HHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC GSVVVIGATALFYMGLGQSKNLSLLLISSLVIIGMLVGLILVKYFLFFLRSVALKCFSLI CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKQSLYETKLDHHLVEFSEFLQGDKLIKPLAYSLPTWVFGYAISYYLAGMLIGMPISFPE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ALLFMFLGGMGVAIPSAPSGIGVFHAAIISGFIILGRDPGEGLVYATVVHLTQFLITTVL HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHH ACFAYLVWRLSHQKNMRIN HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRKLIFGIIVSGIAIYFLQKNFDISEFERLEGKVNWWIFPLLILSNLWAFIPFSIRWYHL CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LEKKITFHQSFSTAIIGVGLNMVLPARGGDLVRLLMNKRDSDLPLTHLLSRIFLEKVMDL HHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCC GSVVVIGATALFYMGLGQSKNLSLLLISSLVIIGMLVGLILVKYFLFFLRSVALKCFSLI CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GKQSLYETKLDHHLVEFSEFLQGDKLIKPLAYSLPTWVFGYAISYYLAGMLIGMPISFPE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ALLFMFLGGMGVAIPSAPSGIGVFHAAIISGFIILGRDPGEGLVYATVVHLTQFLITTVL HHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHH ACFAYLVWRLSHQKNMRIN HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA