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The map label for this gene is blc [H]

Identifier: 183220880

GI number: 183220880

Start: 1554801

End: 1555364

Strand: Reverse

Name: blc [H]

Synonym: LEPBI_I1493

Alternate gene names: 183220880

Gene position: 1555364-1554801 (Counterclockwise)

Preceding gene: 183220881

Following gene: 183220877

Centisome position: 43.21

GC content: 38.48

Gene sequence:

>564_bases
ATGTTTTTCTTCTATCACTGTTCTCTCTCTCAATTTCCAAATGCAAAGGAAACAAACGAATCCGAATTTCCATTTGTTTC
GCTACTGTCTGTAAGTCTGGGAACCTACGTTTCTTCCTCACGATTTGATCGTTATGTGGAAAGTAATCTTGAATGGAGTC
GTTTCCTAGGTAAGTGGCATGAAATCAAACGCATCGATAATCCGTTCCAAATGGGACTAACCAATGTAACCGCAGATTAT
GCTTTAAGAGAAGATGGAAACATCCGCGTGAAAAACGAAGGAGAAACGATAACAGGGAGAAGTTCCTTAGAAGGAGTTGC
GATCATTGTAAACCCAAGTGTAGGGAAGTTGAAGGTAAGTTTTTTATACCCGTTGTTTTTTGGAGACTATTTGATTTTAA
AAATCGATCGAAATGGTTACCAAACCGCACTCATCGGTGGCCCAGAACCAAATTTTTTATGGATTTTTTCAAGAGAACCT
ACCATTTCTTCAGTCACTGAAAACGAATACATTCAATTTGCAAAAACGATTGGTTATGACACCAATCGTTTGCTTGCGTA
TTAG

Upstream 100 bases:

>100_bases
TTTTACTCAAAGATCCCCTCTTCCAATCTAAACTTTGATGGAAGAGAGGAAAAATTCATTCTTACTTAAAAACAAAAATT
GGCATCAATGCTTCTTTTTA

Downstream 100 bases:

>100_bases
ATTTTATCCTAGAGCCTTGATGACATCTTCTGGAGCCTGTACGAGTTCTACAAGTACCCCTTCACTACAAAGTGGGAATT
CTTCATTTCCTTTTGGATGG

Product: putative lipocalin

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MFFFYHCSLSQFPNAKETNESEFPFVSLLSVSLGTYVSSSRFDRYVESNLEWSRFLGKWHEIKRIDNPFQMGLTNVTADY
ALREDGNIRVKNEGETITGRSSLEGVAIIVNPSVGKLKVSFLYPLFFGDYLILKIDRNGYQTALIGGPEPNFLWIFSREP
TISSVTENEYIQFAKTIGYDTNRLLAY

Sequences:

>Translated_187_residues
MFFFYHCSLSQFPNAKETNESEFPFVSLLSVSLGTYVSSSRFDRYVESNLEWSRFLGKWHEIKRIDNPFQMGLTNVTADY
ALREDGNIRVKNEGETITGRSSLEGVAIIVNPSVGKLKVSFLYPLFFGDYLILKIDRNGYQTALIGGPEPNFLWIFSREP
TISSVTENEYIQFAKTIGYDTNRLLAY
>Mature_187_residues
MFFFYHCSLSQFPNAKETNESEFPFVSLLSVSLGTYVSSSRFDRYVESNLEWSRFLGKWHEIKRIDNPFQMGLTNVTADY
ALREDGNIRVKNEGETITGRSSLEGVAIIVNPSVGKLKVSFLYPLFFGDYLILKIDRNGYQTALIGGPEPNFLWIFSREP
TISSVTENEYIQFAKTIGYDTNRLLAY

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Escherichia coli, GI1790592, Length=148, Percent_Identity=37.8378378378378, Blast_Score=101, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 21432; Mature: 21432

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFFYHCSLSQFPNAKETNESEFPFVSLLSVSLGTYVSSSRFDRYVESNLEWSRFLGKWH
CEEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EIKRIDNPFQMGLTNVTADYALREDGNIRVKNEGETITGRSSLEGVAIIVNPSVGKLKVS
HHHHCCCHHHHCCCCCEECEEEECCCCEEEECCCCEEECCCCCCEEEEEEECCCCEEEEE
FLYPLFFGDYLILKIDRNGYQTALIGGPEPNFLWIFSREPTISSVTENEYIQFAKTIGYD
EEEHHHHCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCC
TNRLLAY
CCEEEEC
>Mature Secondary Structure
MFFFYHCSLSQFPNAKETNESEFPFVSLLSVSLGTYVSSSRFDRYVESNLEWSRFLGKWH
CEEEEEECHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
EIKRIDNPFQMGLTNVTADYALREDGNIRVKNEGETITGRSSLEGVAIIVNPSVGKLKVS
HHHHCCCHHHHCCCCCEECEEEECCCCEEEECCCCEEECCCCCCEEEEEEECCCCEEEEE
FLYPLFFGDYLILKIDRNGYQTALIGGPEPNFLWIFSREPTISSVTENEYIQFAKTIGYD
EEEHHHHCCEEEEEECCCCCEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCC
TNRLLAY
CCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]