| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is rsbP [H]
Identifier: 183220845
GI number: 183220845
Start: 1519191
End: 1521275
Strand: Reverse
Name: rsbP [H]
Synonym: LEPBI_I1458
Alternate gene names: 183220845
Gene position: 1521275-1519191 (Counterclockwise)
Preceding gene: 183220846
Following gene: 183220841
Centisome position: 42.26
GC content: 37.79
Gene sequence:
>2085_bases ATGCGAAAAGTAATTTTAGGTTTGGTGTGTGTCGCCATAGCCTTATCTTCATTCCAATGCCAGAATCCTGATTTAGAGGG AGACCTCCGTTTTCGCCAAGGGATCTTAGATTTACGCGAGATCACTTTCAAAGAAAACACATCCATCGAATTACAAGGGG AATGGGAATTGTATTTTGGAGAATTCCATTACCCACCCTTTCACGGCCAAAAGGAATTAACAGGATACCTTGCCATTCCA AACTCATGGCAAAATGAAGAGTATGGTGGCATCGAATTACCAAGAACTGGTAAGGTCACCTTACGTGCGTTCATTCACAC TAACAAACAAACTGTCGGCCAAGAACTTAGGATTTATATTCCAGACATTGCCTCTTCGTATCGTTTTTTTGCCAATGGAG TTCTCATTGGTGGCCAAGGAAAACCTGGTATCAATCAATTTGATGACACTCCTCGTATCAAATCAAAATACTACACTCTC ATCCCGGACGATGAAGTGATCGAACTTGTATTTCACATTGCCAATTATGAAAACAATTTTGGTGGATTTTGGGGGAATCC TATCATAGGAAACAAATATGCAATGGATCGGGAGAAGATGTTTGCCAATGCCAGAGAATTGTTTCTCCTAGGTGCACTAT CCCTCATTGGACTCTATCATTTTGGATTGTTCTTTTACAAACGAAAGGAAAAATCCATTTTTTACTTTGCTATCTTTTGT TTTTTACTGGGAATACGCCTTGCCTTTACAGGCGAGAGGTATGTATTGGAACTCTTTCCTAGGTTTCATTGGCCCACTGC ATTTCGCATTGAGTTTGCTTCTTATTATTTTGCAGTCCCCACGTTTTTACTTTTTATCCATTCCTTATTTCCAGAAGAAT CAAAAGCCAAACATGTTCGCCGTGCCATCATCACAAGTTCACTCTTTTCTTTGACTTTATTTTTACCCATCTCCATTTTT ACGATTTTACTTTATGGATTTCAAATTTTAGCATTCATCATCATCGGATATGTGATCCATATCAATTTAAAAGCTGTCAT CAACAGCAGACCAAATTCTAAACTTTTTTTGATGGGACTACTTGTCTTAGCATTTTCCGTTTCCTTTGATATCCTCAAAC ATAGTTTGAATAGTCGTGGTATTGGACTCACTCCCTATGCGTTATTATGTTTTATCTTCATCCAATCTCTTATTCTATCG AGTAGGATTGCCAATGCTTTTGTTCGCGCTGAAGAACTGGCAGAAAGTTTAAAAATTAGCAATGAATCATTGTTAGCTGT GACAGAAAACCTAGAACAAATAGTTTCAGACAGAACCTATCAATTGAATTCCTCTCTCAATCGAATTAAAAAGGACCTAC TCCTCGCCAAAAAGATCCAACAAAAAATTCTGCCGGAAGATGGAATCAAATTTGATCCTTTAAAAATCCATCTTTACTTC CAACCACAGGATGAAGTGGGAGGAGATTTTTATGATATCTTTGAATTGGATAATGGGACCGTTCGATTTTTTGTCGCGGA CGCAACAGGACACGGAATCCAGGCAGCGTTATATACAATGGCCATCAAATCAGAATATGAAGCCATCAAACGATTCATCA CAAAAACCGATGATTTGATGAACCATCTCAACCAAAAAATCCAAAATAAGTTTTCTGGTTTGAAGATTGTTTTTTCTGGA TTTTTATTGGACATTGATACCAAAACAAAAACCGTTTATTATTCCTCAGCGGGTCACCCAAATCAAATTTTTGTTTCGAA TGGAACACAAATCATCTTGAACCGAACAGGCAATATCATTGGACTAAAAAAGGACCAACCCTATACGCAAAAACAATTCC CTATTTTGGAAGGGGATCGCATTTTACTGTTTACCGATGGGATGTTAGAACAAAAAAATGAAGCGCGAGAAGAGTTTGGA ATGGAACGAATCCAAACCATTCTTTCTGAATTCCAAAATAAAGAATCGGAAAGAGTCCTTTCGGAACTTGTCATCCAATT GTTTTTATTCCAAGGGAAAGAAGAACAAGAAGATGACCAAACGATGGTGCTTGTAGAATGGGAAAAAAAAGATCCAGTAA CTTAG
Upstream 100 bases:
>100_bases GGAAAGCAGTTTTTTCTGTCTCTGCCTTTATGGATGTCATAGGATATTCTGGGCGAAATTAGTTCTTTCCAAACCAAAGA AGGAAAGAGACTCAAGTACA
Downstream 100 bases:
>100_bases AGTGTTTTTATCACCGTAAGATACTTTGATGGATTCTTTTTTATGTTTCTATTTTTTTAAGAATAAACGATCCACTCCAT TTTTTTCGAACTCTGCATCA
Product: putative protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 694; Mature: 694
Protein sequence:
>694_residues MRKVILGLVCVAIALSSFQCQNPDLEGDLRFRQGILDLREITFKENTSIELQGEWELYFGEFHYPPFHGQKELTGYLAIP NSWQNEEYGGIELPRTGKVTLRAFIHTNKQTVGQELRIYIPDIASSYRFFANGVLIGGQGKPGINQFDDTPRIKSKYYTL IPDDEVIELVFHIANYENNFGGFWGNPIIGNKYAMDREKMFANARELFLLGALSLIGLYHFGLFFYKRKEKSIFYFAIFC FLLGIRLAFTGERYVLELFPRFHWPTAFRIEFASYYFAVPTFLLFIHSLFPEESKAKHVRRAIITSSLFSLTLFLPISIF TILLYGFQILAFIIIGYVIHINLKAVINSRPNSKLFLMGLLVLAFSVSFDILKHSLNSRGIGLTPYALLCFIFIQSLILS SRIANAFVRAEELAESLKISNESLLAVTENLEQIVSDRTYQLNSSLNRIKKDLLLAKKIQQKILPEDGIKFDPLKIHLYF QPQDEVGGDFYDIFELDNGTVRFFVADATGHGIQAALYTMAIKSEYEAIKRFITKTDDLMNHLNQKIQNKFSGLKIVFSG FLLDIDTKTKTVYYSSAGHPNQIFVSNGTQIILNRTGNIIGLKKDQPYTQKQFPILEGDRILLFTDGMLEQKNEAREEFG MERIQTILSEFQNKESERVLSELVIQLFLFQGKEEQEDDQTMVLVEWEKKDPVT
Sequences:
>Translated_694_residues MRKVILGLVCVAIALSSFQCQNPDLEGDLRFRQGILDLREITFKENTSIELQGEWELYFGEFHYPPFHGQKELTGYLAIP NSWQNEEYGGIELPRTGKVTLRAFIHTNKQTVGQELRIYIPDIASSYRFFANGVLIGGQGKPGINQFDDTPRIKSKYYTL IPDDEVIELVFHIANYENNFGGFWGNPIIGNKYAMDREKMFANARELFLLGALSLIGLYHFGLFFYKRKEKSIFYFAIFC FLLGIRLAFTGERYVLELFPRFHWPTAFRIEFASYYFAVPTFLLFIHSLFPEESKAKHVRRAIITSSLFSLTLFLPISIF TILLYGFQILAFIIIGYVIHINLKAVINSRPNSKLFLMGLLVLAFSVSFDILKHSLNSRGIGLTPYALLCFIFIQSLILS SRIANAFVRAEELAESLKISNESLLAVTENLEQIVSDRTYQLNSSLNRIKKDLLLAKKIQQKILPEDGIKFDPLKIHLYF QPQDEVGGDFYDIFELDNGTVRFFVADATGHGIQAALYTMAIKSEYEAIKRFITKTDDLMNHLNQKIQNKFSGLKIVFSG FLLDIDTKTKTVYYSSAGHPNQIFVSNGTQIILNRTGNIIGLKKDQPYTQKQFPILEGDRILLFTDGMLEQKNEAREEFG MERIQTILSEFQNKESERVLSELVIQLFLFQGKEEQEDDQTMVLVEWEKKDPVT >Mature_694_residues MRKVILGLVCVAIALSSFQCQNPDLEGDLRFRQGILDLREITFKENTSIELQGEWELYFGEFHYPPFHGQKELTGYLAIP NSWQNEEYGGIELPRTGKVTLRAFIHTNKQTVGQELRIYIPDIASSYRFFANGVLIGGQGKPGINQFDDTPRIKSKYYTL IPDDEVIELVFHIANYENNFGGFWGNPIIGNKYAMDREKMFANARELFLLGALSLIGLYHFGLFFYKRKEKSIFYFAIFC FLLGIRLAFTGERYVLELFPRFHWPTAFRIEFASYYFAVPTFLLFIHSLFPEESKAKHVRRAIITSSLFSLTLFLPISIF TILLYGFQILAFIIIGYVIHINLKAVINSRPNSKLFLMGLLVLAFSVSFDILKHSLNSRGIGLTPYALLCFIFIQSLILS SRIANAFVRAEELAESLKISNESLLAVTENLEQIVSDRTYQLNSSLNRIKKDLLLAKKIQQKILPEDGIKFDPLKIHLYF QPQDEVGGDFYDIFELDNGTVRFFVADATGHGIQAALYTMAIKSEYEAIKRFITKTDDLMNHLNQKIQNKFSGLKIVFSG FLLDIDTKTKTVYYSSAGHPNQIFVSNGTQIILNRTGNIIGLKKDQPYTQKQFPILEGDRILLFTDGMLEQKNEAREEFG MERIQTILSEFQNKESERVLSELVIQLFLFQGKEEQEDDQTMVLVEWEKKDPVT
Specific function: Positive regulator of sigma-B activity. Dephosphorylates rsbV in response to energy stress [H]
COG id: COG2208
COG function: function code TK; Serine phosphatase RsbU, regulator of sigma subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PP2C-like domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001610 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR001932 - InterPro: IPR010822 [H]
Pfam domain/function: PF00989 PAS; PF07228 SpoIIE [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 79730; Mature: 79730
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVILGLVCVAIALSSFQCQNPDLEGDLRFRQGILDLREITFKENTSIELQGEWELYFG CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEE EFHYPPFHGQKELTGYLAIPNSWQNEEYGGIELPRTGKVTLRAFIHTNKQTVGQELRIYI EECCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCEEEEEEEECCHHHCCCEEEEEE PDIASSYRFFANGVLIGGQGKPGINQFDDTPRIKSKYYTLIPDDEVIELVFHIANYENNF CCHHHCHHHHHCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCC GGFWGNPIIGNKYAMDREKMFANARELFLLGALSLIGLYHFGLFFYKRKEKSIFYFAIFC CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH FLLGIRLAFTGERYVLELFPRFHWPTAFRIEFASYYFAVPTFLLFIHSLFPEESKAKHVR HHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RAIITSSLFSLTLFLPISIFTILLYGFQILAFIIIGYVIHINLKAVINSRPNSKLFLMGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHH LVLAFSVSFDILKHSLNSRGIGLTPYALLCFIFIQSLILSSRIANAFVRAEELAESLKIS HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NESLLAVTENLEQIVSDRTYQLNSSLNRIKKDLLLAKKIQQKILPEDGIKFDPLKIHLYF CCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEEEEEE QPQDEVGGDFYDIFELDNGTVRFFVADATGHGIQAALYTMAIKSEYEAIKRFITKTDDLM CCCHHCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHLNQKIQNKFSGLKIVFSGFLLDIDTKTKTVYYSSAGHPNQIFVSNGTQIILNRTGNII HHHHHHHHHHHCCCEEEEECEEEEECCCCEEEEEECCCCCCEEEEECCCEEEEECCCCEE GLKKDQPYTQKQFPILEGDRILLFTDGMLEQKNEAREEFGMERIQTILSEFQNKESERVL EECCCCCCCCCCCCEECCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHH SELVIQLFLFQGKEEQEDDQTMVLVEWEKKDPVT HHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MRKVILGLVCVAIALSSFQCQNPDLEGDLRFRQGILDLREITFKENTSIELQGEWELYFG CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEE EFHYPPFHGQKELTGYLAIPNSWQNEEYGGIELPRTGKVTLRAFIHTNKQTVGQELRIYI EECCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCCCEEEEEEEECCHHHCCCEEEEEE PDIASSYRFFANGVLIGGQGKPGINQFDDTPRIKSKYYTLIPDDEVIELVFHIANYENNF CCHHHCHHHHHCCEEECCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCC GGFWGNPIIGNKYAMDREKMFANARELFLLGALSLIGLYHFGLFFYKRKEKSIFYFAIFC CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHH FLLGIRLAFTGERYVLELFPRFHWPTAFRIEFASYYFAVPTFLLFIHSLFPEESKAKHVR HHHHHHHHCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHH RAIITSSLFSLTLFLPISIFTILLYGFQILAFIIIGYVIHINLKAVINSRPNSKLFLMGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHH LVLAFSVSFDILKHSLNSRGIGLTPYALLCFIFIQSLILSSRIANAFVRAEELAESLKIS HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NESLLAVTENLEQIVSDRTYQLNSSLNRIKKDLLLAKKIQQKILPEDGIKFDPLKIHLYF CCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEEEEEE QPQDEVGGDFYDIFELDNGTVRFFVADATGHGIQAALYTMAIKSEYEAIKRFITKTDDLM CCCHHCCCCEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH NHLNQKIQNKFSGLKIVFSGFLLDIDTKTKTVYYSSAGHPNQIFVSNGTQIILNRTGNII HHHHHHHHHHHCCCEEEEECEEEEECCCCEEEEEECCCCCCEEEEECCCEEEEECCCCEE GLKKDQPYTQKQFPILEGDRILLFTDGMLEQKNEAREEFGMERIQTILSEFQNKESERVL EECCCCCCCCCCCCEECCCEEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHH SELVIQLFLFQGKEEQEDDQTMVLVEWEKKDPVT HHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 10632888 [H]