Click here to switch to the map view.

The map label for this gene is 183220846

Identifier: 183220846

GI number: 183220846

Start: 1521314

End: 1522636

Strand: Reverse

Name: 183220846

Synonym: LEPBI_I1459

Alternate gene names: NA

Gene position: 1522636-1521314 (Counterclockwise)

Preceding gene: 183220848

Following gene: 183220845

Centisome position: 42.3

GC content: 44.52

Gene sequence:

>1323_bases
ATGGCTGAAACCTCTACATTGAACCAAAGACCTGCCTCCTCACTTCCATTATTGGAAGAAATGGAAAGAACTTACAAAGA
CCTACCCATGGAAGCCATTGTCAAACAAGACATCCTCCGGCAGGGGATTCATTTTTTTCCTGAGGCTTTCCAAGTGAAAG
ACCCGTATAAATCCAAAGACTACTTCATCTTTTCCTTTGATCATATCCCACTGGCCGACCTAAAAGATGGCGCAGATACC
AAAGCACCGGAAGAAATCAAAATCAGCGGAGGTCACTTCGGACTTCTGAAAACAGTGATCTCCACTCGTAACAACCCAAA
TTCACCGTACAAAATGAAACTGAAGGAGGGAAAGCCAACTCTCTACTTAGATGAAACAGAGATTGGAACCGCCGAATACC
CTCCGATTCCGTCTTGGTACAAACACAAAACCAAATCGGGAAAATTTCCGGGTGAAATTGCTCCCGTCATTGAATGGGGA
TACCTCTTGTACCTAACGGTCTTTCGCAATTGCCAGTACTTTGGAAAAGATGAGGAATGTGCCTACTGCGATATCAACCA
TAACTACCGCCAACAAAAAGGGGCCGGACGGCCTTATACAGGTGTTAAGGATGTCGAAGATATTTTAGAAGTCCTTTCTT
GGGTGGATGCAGAAGACCAAATTGCAAAGGTATACACCATCACTGGTGGCTCTGTCCTCACCAATTTAAAGAAAAAATCA
GAAGTAGATTTTTACCTCCAATACCCACAAGCCATCGAAGCCAGGTTTCCCAAACGATGGATGGGAAAACTGGTGGCACA
GGCCTTTGAAAAGGAAGATTGCCAGAAATTCAAAGATGCGGGGATCCAAATCTACCATCCCAATTATGAAGTGTGGGACA
AAACACTCTTTGAAAAAATTTGTCCAGGGAAAGCCAGTTGGATCGGGTATGAAAACTGGATCCGACGTGTGGTGGATTCG
GCTGAAGTGTTTGGTCCCGAAAATGTCATTCCAAACTTTGTTGGTGGAGTGGAACTTTCCGAACCATGGGGATTCAAAAC
AGTGAAAGAGGCCATCACATCCACCAAACAAGGATTAGACTTTTTTATGTCCAAAGGAATTGTGCCTAGATTTACAGCAT
GGTGCCCCGAACCATACACAACCCTTGGCCAACAAGCAGGTCCTCCGCTTGTTTATTTTTGTGAATTGTTACGCGCATGG
AAAGAAACCTTTGAATCCTATGGATTGCCAACACCTCCTGGATATGGGGAACCTGGACCCGGGAAAGCAGTTTTTTCTGT
CTCTGCCTTTATGGATGTCATAGGATATTCTGGGCGAAATTAG

Upstream 100 bases:

>100_bases
TTCGGTATTTTTGCGAAGAACCGCGGAATTTAGGGGGTTTTTGGCTATTTTTCTGGGAAAATCGCTTTGTCTAAGAGAAA
GGAAGAAAAATACTCCCATT

Downstream 100 bases:

>100_bases
TTCTTTCCAAACCAAAGAAGGAAAGAGACTCAAGTACAATGCGAAAAGTAATTTTAGGTTTGGTGTGTGTCGCCATAGCC
TTATCTTCATTCCAATGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: Elongator /MiaB/NifB; Fe-S Protein; Radical SAM Domain Protein; Radical SAM Family Protein; Radical SAM Family Fe-S Protein

Number of amino acids: Translated: 440; Mature: 439

Protein sequence:

>440_residues
MAETSTLNQRPASSLPLLEEMERTYKDLPMEAIVKQDILRQGIHFFPEAFQVKDPYKSKDYFIFSFDHIPLADLKDGADT
KAPEEIKISGGHFGLLKTVISTRNNPNSPYKMKLKEGKPTLYLDETEIGTAEYPPIPSWYKHKTKSGKFPGEIAPVIEWG
YLLYLTVFRNCQYFGKDEECAYCDINHNYRQQKGAGRPYTGVKDVEDILEVLSWVDAEDQIAKVYTITGGSVLTNLKKKS
EVDFYLQYPQAIEARFPKRWMGKLVAQAFEKEDCQKFKDAGIQIYHPNYEVWDKTLFEKICPGKASWIGYENWIRRVVDS
AEVFGPENVIPNFVGGVELSEPWGFKTVKEAITSTKQGLDFFMSKGIVPRFTAWCPEPYTTLGQQAGPPLVYFCELLRAW
KETFESYGLPTPPGYGEPGPGKAVFSVSAFMDVIGYSGRN

Sequences:

>Translated_440_residues
MAETSTLNQRPASSLPLLEEMERTYKDLPMEAIVKQDILRQGIHFFPEAFQVKDPYKSKDYFIFSFDHIPLADLKDGADT
KAPEEIKISGGHFGLLKTVISTRNNPNSPYKMKLKEGKPTLYLDETEIGTAEYPPIPSWYKHKTKSGKFPGEIAPVIEWG
YLLYLTVFRNCQYFGKDEECAYCDINHNYRQQKGAGRPYTGVKDVEDILEVLSWVDAEDQIAKVYTITGGSVLTNLKKKS
EVDFYLQYPQAIEARFPKRWMGKLVAQAFEKEDCQKFKDAGIQIYHPNYEVWDKTLFEKICPGKASWIGYENWIRRVVDS
AEVFGPENVIPNFVGGVELSEPWGFKTVKEAITSTKQGLDFFMSKGIVPRFTAWCPEPYTTLGQQAGPPLVYFCELLRAW
KETFESYGLPTPPGYGEPGPGKAVFSVSAFMDVIGYSGRN
>Mature_439_residues
AETSTLNQRPASSLPLLEEMERTYKDLPMEAIVKQDILRQGIHFFPEAFQVKDPYKSKDYFIFSFDHIPLADLKDGADTK
APEEIKISGGHFGLLKTVISTRNNPNSPYKMKLKEGKPTLYLDETEIGTAEYPPIPSWYKHKTKSGKFPGEIAPVIEWGY
LLYLTVFRNCQYFGKDEECAYCDINHNYRQQKGAGRPYTGVKDVEDILEVLSWVDAEDQIAKVYTITGGSVLTNLKKKSE
VDFYLQYPQAIEARFPKRWMGKLVAQAFEKEDCQKFKDAGIQIYHPNYEVWDKTLFEKICPGKASWIGYENWIRRVVDSA
EVFGPENVIPNFVGGVELSEPWGFKTVKEAITSTKQGLDFFMSKGIVPRFTAWCPEPYTTLGQQAGPPLVYFCELLRAWK
ETFESYGLPTPPGYGEPGPGKAVFSVSAFMDVIGYSGRN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50016; Mature: 49885

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETSTLNQRPASSLPLLEEMERTYKDLPMEAIVKQDILRQGIHFFPEAFQVKDPYKSKD
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC
YFIFSFDHIPLADLKDGADTKAPEEIKISGGHFGLLKTVISTRNNPNSPYKMKLKEGKPT
EEEEEECCCCHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCE
LYLDETEIGTAEYPPIPSWYKHKTKSGKFPGEIAPVIEWGYLLYLTVFRNCQYFGKDEEC
EEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCE
AYCDINHNYRQQKGAGRPYTGVKDVEDILEVLSWVDAEDQIAKVYTITGGSVLTNLKKKS
EEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEEEECCHHHHHHHHHC
EVDFYLQYPQAIEARFPKRWMGKLVAQAFEKEDCQKFKDAGIQIYHPNYEVWDKTLFEKI
CCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHH
CPGKASWIGYENWIRRVVDSAEVFGPENVIPNFVGGVELSEPWGFKTVKEAITSTKQGLD
CCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
FFMSKGIVPRFTAWCPEPYTTLGQQAGPPLVYFCELLRAWKETFESYGLPTPPGYGEPGP
HHHHCCCCCHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GKAVFSVSAFMDVIGYSGRN
CCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
AETSTLNQRPASSLPLLEEMERTYKDLPMEAIVKQDILRQGIHFFPEAFQVKDPYKSKD
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCC
YFIFSFDHIPLADLKDGADTKAPEEIKISGGHFGLLKTVISTRNNPNSPYKMKLKEGKPT
EEEEEECCCCHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCCEEEEEECCCCE
LYLDETEIGTAEYPPIPSWYKHKTKSGKFPGEIAPVIEWGYLLYLTVFRNCQYFGKDEEC
EEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCCE
AYCDINHNYRQQKGAGRPYTGVKDVEDILEVLSWVDAEDQIAKVYTITGGSVLTNLKKKS
EEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHEEEEEEEECCHHHHHHHHHC
EVDFYLQYPQAIEARFPKRWMGKLVAQAFEKEDCQKFKDAGIQIYHPNYEVWDKTLFEKI
CCCEEEECCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHH
CPGKASWIGYENWIRRVVDSAEVFGPENVIPNFVGGVELSEPWGFKTVKEAITSTKQGLD
CCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
FFMSKGIVPRFTAWCPEPYTTLGQQAGPPLVYFCELLRAWKETFESYGLPTPPGYGEPGP
HHHHCCCCCHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GKAVFSVSAFMDVIGYSGRN
CCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA