| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220817
Identifier: 183220817
GI number: 183220817
Start: 1492532
End: 1493596
Strand: Reverse
Name: 183220817
Synonym: LEPBI_I1429
Alternate gene names: NA
Gene position: 1493596-1492532 (Counterclockwise)
Preceding gene: 183220818
Following gene: 183220815
Centisome position: 41.49
GC content: 40.19
Gene sequence:
>1065_bases ATGGTTCCGATTTTATTTGTTTTGTTATGTTTCGCTTCCTGTACACCAAAAATTGGAGAACAAATCAACAAACGAATTTC AGATCCCTTTGATGAAACCAAAAACTTAAATGTTCACTTTGTCACAACCAGAAGAGAAATGGGAACAAAAGACCGCTGTG AAGGCAATAGTTTTGGTTTTATCACGGATATCAACCCACACTACGGCTTATGCATTGTCAATGTGCCCGCCAAACATATC ATTGGTGACATTTCTTTAGACAATAACCAAGACAAACATACATTCTTTCAATTCAAAGGAAGGGTGAATACGGATGAAAA AGAATTTATCTCTAAACTCAAATCCTCAGGGAGTGAAGAGGTTTTGGTATTTGTCCATGGATTCAATGTGAACTTTGATG AAGCTGTCTTACGGGCAGGCCAAATCAAATATGATCTCAAATTCCCAGGTGAAGTAGTTGTGTATTCCTGGCCTGCAGGT GCGGATCCTGGAATTCTTAGCCAAGTGATGGTGAAGTCTACTTATGATTTGAATTTCACGGAAGCCAAAATCAACAGGGA ACCTTTTGCTAATTTTCTAAGTTCCATCACGTCCACTGGAAAAAAAATCCAACTCGTCGTTCATAGTATGGGTCACCAAG TGGTCTTGCCATCGATTGCTTCCCTTTCAAAATCGGGAAAATCCAAATTCATTTCGGAACTCATTTTAAATGCACCAGAC TTTGACAAAAATGAATTTGAATTATTGTTAGGTGATCTCACAAAATCAGCAGATCGAATCACTTTGTATTGTTCTCCAGG TGACAATGCCCTCATTGCCTCTCAAAAAGTAAATGGTGCCCCAAGAGCTGGGATGTGTTTTAAGTATTCCGGTGTGGACG TGATCAATGTGAACGAAGTGGATGATCCCGTTCTTGGTGTGGGTGGTCTTGGGCACGGGTATTATTCTTCCAGGCCAATT CTCACTGACATCTACCAAGTGTTACTTGGTGTTTCTGTCGACAAACGCCTCTTCATTCGTAAGTCAGGCCCCAAAAATGG TGAAAACTATGTTTTGCGAAAGTAA
Upstream 100 bases:
>100_bases TGATTCTCCTTCCACATTAGAATCCGATTGCCATCCTACTCAGGTTTCCCATCCTACCGTTTCCGATTTTGGTTTAATAT CGGTTTCAAAATGGCTCCTT
Downstream 100 bases:
>100_bases ATTATTTTCTCATAGTCGGTAGGTTCCCGAGTCTCATCAAGGAACCACGAGATCCTCACCAGCTTGGATGGCCCTTGTTC GGATTCGGTTCGGTTGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MVPILFVLLCFASCTPKIGEQINKRISDPFDETKNLNVHFVTTRREMGTKDRCEGNSFGFITDINPHYGLCIVNVPAKHI IGDISLDNNQDKHTFFQFKGRVNTDEKEFISKLKSSGSEEVLVFVHGFNVNFDEAVLRAGQIKYDLKFPGEVVVYSWPAG ADPGILSQVMVKSTYDLNFTEAKINREPFANFLSSITSTGKKIQLVVHSMGHQVVLPSIASLSKSGKSKFISELILNAPD FDKNEFELLLGDLTKSADRITLYCSPGDNALIASQKVNGAPRAGMCFKYSGVDVINVNEVDDPVLGVGGLGHGYYSSRPI LTDIYQVLLGVSVDKRLFIRKSGPKNGENYVLRK
Sequences:
>Translated_354_residues MVPILFVLLCFASCTPKIGEQINKRISDPFDETKNLNVHFVTTRREMGTKDRCEGNSFGFITDINPHYGLCIVNVPAKHI IGDISLDNNQDKHTFFQFKGRVNTDEKEFISKLKSSGSEEVLVFVHGFNVNFDEAVLRAGQIKYDLKFPGEVVVYSWPAG ADPGILSQVMVKSTYDLNFTEAKINREPFANFLSSITSTGKKIQLVVHSMGHQVVLPSIASLSKSGKSKFISELILNAPD FDKNEFELLLGDLTKSADRITLYCSPGDNALIASQKVNGAPRAGMCFKYSGVDVINVNEVDDPVLGVGGLGHGYYSSRPI LTDIYQVLLGVSVDKRLFIRKSGPKNGENYVLRK >Mature_354_residues MVPILFVLLCFASCTPKIGEQINKRISDPFDETKNLNVHFVTTRREMGTKDRCEGNSFGFITDINPHYGLCIVNVPAKHI IGDISLDNNQDKHTFFQFKGRVNTDEKEFISKLKSSGSEEVLVFVHGFNVNFDEAVLRAGQIKYDLKFPGEVVVYSWPAG ADPGILSQVMVKSTYDLNFTEAKINREPFANFLSSITSTGKKIQLVVHSMGHQVVLPSIASLSKSGKSKFISELILNAPD FDKNEFELLLGDLTKSADRITLYCSPGDNALIASQKVNGAPRAGMCFKYSGVDVINVNEVDDPVLGVGGLGHGYYSSRPI LTDIYQVLLGVSVDKRLFIRKSGPKNGENYVLRK
Specific function: Unknown
COG id: COG4782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39153; Mature: 39153
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPILFVLLCFASCTPKIGEQINKRISDPFDETKNLNVHFVTTRREMGTKDRCEGNSFGF CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCEEEEEEEHHHCCCCCCCCCCCCEE ITDINPHYGLCIVNVPAKHIIGDISLDNNQDKHTFFQFKGRVNTDEKEFISKLKSSGSEE EEECCCCCCEEEEECCHHHHEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCE VLVFVHGFNVNFDEAVLRAGQIKYDLKFPGEVVVYSWPAGADPGILSQVMVKSTYDLNFT EEEEEEECCCCHHHHHHHCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC EAKINREPFANFLSSITSTGKKIQLVVHSMGHQVVLPSIASLSKSGKSKFISELILNAPD HHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCC FDKNEFELLLGDLTKSADRITLYCSPGDNALIASQKVNGAPRAGMCFKYSGVDVINVNEV CCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCEEEEECCCC DDPVLGVGGLGHGYYSSRPILTDIYQVLLGVSVDKRLFIRKSGPKNGENYVLRK CCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEC >Mature Secondary Structure MVPILFVLLCFASCTPKIGEQINKRISDPFDETKNLNVHFVTTRREMGTKDRCEGNSFGF CHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHCCCEEEEEEEHHHCCCCCCCCCCCCEE ITDINPHYGLCIVNVPAKHIIGDISLDNNQDKHTFFQFKGRVNTDEKEFISKLKSSGSEE EEECCCCCCEEEEECCHHHHEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCE VLVFVHGFNVNFDEAVLRAGQIKYDLKFPGEVVVYSWPAGADPGILSQVMVKSTYDLNFT EEEEEEECCCCHHHHHHHCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCC EAKINREPFANFLSSITSTGKKIQLVVHSMGHQVVLPSIASLSKSGKSKFISELILNAPD HHHCCCCHHHHHHHHHHCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCC FDKNEFELLLGDLTKSADRITLYCSPGDNALIASQKVNGAPRAGMCFKYSGVDVINVNEV CCCCHHHHHHHHHCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEEEECCEEEEECCCC DDPVLGVGGLGHGYYSSRPILTDIYQVLLGVSVDKRLFIRKSGPKNGENYVLRK CCCEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA