| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is resE [H]
Identifier: 183220811
GI number: 183220811
Start: 1485464
End: 1486351
Strand: Reverse
Name: resE [H]
Synonym: LEPBI_I1423
Alternate gene names: 183220811
Gene position: 1486351-1485464 (Counterclockwise)
Preceding gene: 183220815
Following gene: 183220810
Centisome position: 41.29
GC content: 39.53
Gene sequence:
>888_bases TTGAGAGGATCTGCACAATTTCGTATGTTTTTTTCTTTGGCATGGCTTTCCCTCACTCTGTCACTCGGAGTCTGGTGGTG GATTTTAGGGTTTCGCCAAGCCAAAACCATTTCAGAAATTTCAATCAGCCAGGAAAGGCAATTGGAACTGAATCGTGTGA ACCGGATGTTGCAACTGGAAGGATCGTTTTTCCTTTCGATGTTAACACTTGGTGGAGTGACACTAGCCGTACTTTCGTAT AGAGACCACAAACGTTCCAAACTCATTGCTGATTTTTTTTCCACCGTCACTCACGAGATGAAAACTCCTATCGCCAGCTT ACAGCTGCAAATCGAAGTATTATTGGAAGCCACAACAAATCCTGAACTCAAACGAAAACTAGAAAAAATTTGGAAGGAAA ACCAAAGGATAGAATCCCAAATGGGGAATGCTTTTTACCTAGCAAGCCTCATGCAAGGTGAGTCTTTATATCTAGAAACT CTAAGTTTACAAGAATTAAAGGAATCCTATTCCCATCATGAGCCAGACCTGATTTGGGATGTTTCGATCCCATTACAAAA AAAAGTACACCTCGACAGAAAAGCATTTTTTGCGATGTTAAAGAATTTAACAGACAATGCGAAACGACATGGAAAAGCAA ACCAAATCAAACTTTCCATCTTCCAGGTAAAAAACCAAATTTGTTTTTTACTCGAAGACAATGGGTCCGGGTTTCAAGGT AACAAAAAACACTTAACCTTACCTTTCTTACGCCATTCAAAGACCAGTGGGAGCGGAATTGGACTTTATATTGTGAAAAA ATTGATGGAAAAGATGAAAGGGAAATTAGAATTTCCGAACAGTTCGTACGGATTTCAAGTCAAACTGAGTTTGAACGAGG TCACATGA
Upstream 100 bases:
>100_bases GTTCTCCTTAAAAATAAATTCTCGTGTTCCCCCGAGGTGACAACATCTTTTTTTGCTCGTCGTCTTCCCCCATACCCTGA TCTTGTTTTGAGAGGCAAAA
Downstream 100 bases:
>100_bases AACCAAGAATTTTACTCGTAGAAGATGATGAGGGCCTCGGGGAAACCTTAAAAGAACGTTTGGAACAAGACAAATACCGT GTAGAGTGGGCCAAAACAAT
Product: putative two-component sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MRGSAQFRMFFSLAWLSLTLSLGVWWWILGFRQAKTISEISISQERQLELNRVNRMLQLEGSFFLSMLTLGGVTLAVLSY RDHKRSKLIADFFSTVTHEMKTPIASLQLQIEVLLEATTNPELKRKLEKIWKENQRIESQMGNAFYLASLMQGESLYLET LSLQELKESYSHHEPDLIWDVSIPLQKKVHLDRKAFFAMLKNLTDNAKRHGKANQIKLSIFQVKNQICFLLEDNGSGFQG NKKHLTLPFLRHSKTSGSGIGLYIVKKLMEKMKGKLEFPNSSYGFQVKLSLNEVT
Sequences:
>Translated_295_residues MRGSAQFRMFFSLAWLSLTLSLGVWWWILGFRQAKTISEISISQERQLELNRVNRMLQLEGSFFLSMLTLGGVTLAVLSY RDHKRSKLIADFFSTVTHEMKTPIASLQLQIEVLLEATTNPELKRKLEKIWKENQRIESQMGNAFYLASLMQGESLYLET LSLQELKESYSHHEPDLIWDVSIPLQKKVHLDRKAFFAMLKNLTDNAKRHGKANQIKLSIFQVKNQICFLLEDNGSGFQG NKKHLTLPFLRHSKTSGSGIGLYIVKKLMEKMKGKLEFPNSSYGFQVKLSLNEVT >Mature_295_residues MRGSAQFRMFFSLAWLSLTLSLGVWWWILGFRQAKTISEISISQERQLELNRVNRMLQLEGSFFLSMLTLGGVTLAVLSY RDHKRSKLIADFFSTVTHEMKTPIASLQLQIEVLLEATTNPELKRKLEKIWKENQRIESQMGNAFYLASLMQGESLYLET LSLQELKESYSHHEPDLIWDVSIPLQKKVHLDRKAFFAMLKNLTDNAKRHGKANQIKLSIFQVKNQICFLLEDNGSGFQG NKKHLTLPFLRHSKTSGSGIGLYIVKKLMEKMKGKLEFPNSSYGFQVKLSLNEVT
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 33964; Mature: 33964
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGSAQFRMFFSLAWLSLTLSLGVWWWILGFRQAKTISEISISQERQLELNRVNRMLQLE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC GSFFLSMLTLGGVTLAVLSYRDHKRSKLIADFFSTVTHEMKTPIASLQLQIEVLLEATTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEEECCCC PELKRKLEKIWKENQRIESQMGNAFYLASLMQGESLYLETLSLQELKESYSHHEPDLIWD HHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEE VSIPLQKKVHLDRKAFFAMLKNLTDNAKRHGKANQIKLSIFQVKNQICFLLEDNGSGFQG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHEEECCEEEEEEECCCCCCCC NKKHLTLPFLRHSKTSGSGIGLYIVKKLMEKMKGKLEFPNSSYGFQVKLSLNEVT CCCEEEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCC >Mature Secondary Structure MRGSAQFRMFFSLAWLSLTLSLGVWWWILGFRQAKTISEISISQERQLELNRVNRMLQLE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCC GSFFLSMLTLGGVTLAVLSYRDHKRSKLIADFFSTVTHEMKTPIASLQLQIEVLLEATTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEEEEECCCC PELKRKLEKIWKENQRIESQMGNAFYLASLMQGESLYLETLSLQELKESYSHHEPDLIWD HHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEE VSIPLQKKVHLDRKAFFAMLKNLTDNAKRHGKANQIKLSIFQVKNQICFLLEDNGSGFQG ECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHEEECCEEEEEEECCCCCCCC NKKHLTLPFLRHSKTSGSGIGLYIVKKLMEKMKGKLEFPNSSYGFQVKLSLNEVT CCCEEEEHHHHCCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]