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The map label for this gene is pilD [H]

Identifier: 183220797

GI number: 183220797

Start: 1466879

End: 1467736

Strand: Reverse

Name: pilD [H]

Synonym: LEPBI_I1408

Alternate gene names: 183220797

Gene position: 1467736-1466879 (Counterclockwise)

Preceding gene: 183220798

Following gene: 183220796

Centisome position: 40.77

GC content: 36.01

Gene sequence:

>858_bases
ATGGAATCACTGGTAGAATCAAACTGGTATTTTCTTTCCACCGGACTAGCTTATGTGATTCTATTTTTTTTTGCAACTTC
CCTTGCCAGTTTTTACACCACACTCGGCGACAGAATCTTGTATTATTGTTATGAGAAAGGTCGTAAAACATTCCAAGGGA
TAGAACGATGGAAGGTAATCTTTTCCAAACCAAGCCACTGCCCTAGTTGCCAAACAAATGTAACAAAGTTGTATTTGGTT
CCGATTTTCGGATGGTTTTTCACAAAAGGAAAATGTAACAATTGCAAAGTGGAGATACCAAAACTTTATCCACTCACTGA
GTTTTTATTCGGACTCACAGCTATCTTTGTATTTTATGTTTCGGAATCATTACTTGGGACATTTTGCCTTTTGTTTTTTT
TTGGTCACCTACTGATTGCAATGTTGACTGATTCGAAAAAACTTTCCCTTGATTATGAAAACCTACCCTTCCTTATTGGA
TTTGGTTTTGGTTCCAATTATTTTTTATTCGAAGAAACCATTGGGCTCTCGCATCTATATGTGTATTTGGGATTTTTAAT
TTTTTACCTTCTCATTTATCTTTTGTTACGTGGTGGAACGGGACTAGGAGATGTTCTCTTTTCTCCAATCTTTGCCTCCA
TCGCAGGTAATCCTTTTTGGATCGTGTATTTCAATTCTGCATACTTACTTGCGGTTGGCTTCAGTTTGATCCTCCGAAAA
AAAGGAGAAACACTCAAAGGGAAAAAAGTTCCGATGGGACTCTATTTTTCATTAGGAATCTTTTTTACTTTTTTTTTCAA
ACTAATCGTCCATTATTATGAATGGGAGGGGTTCTTAAATTATGGAAACATTGAATGA

Upstream 100 bases:

>100_bases
ATCTTTTGCAACCGAGTGGGAAACTTTGAAACGAGGGATGAAGGCCTTACAAGAACTTTCGAAAGAAAGTGAATCATTTT
AGGAGAATAATGAAAAGAAC

Downstream 100 bases:

>100_bases
TTTAGCGCATATGCGCACAAATTACGTACGTTCTGTCCTTTCGGAAGAGACAGCTGGTTTTGATCCATTGGCACTTTTTT
CGTTATGGTTTTCTGAGGCC

Product: type 4 prepilin-like proteins leader peptide processing enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MESLVESNWYFLSTGLAYVILFFFATSLASFYTTLGDRILYYCYEKGRKTFQGIERWKVIFSKPSHCPSCQTNVTKLYLV
PIFGWFFTKGKCNNCKVEIPKLYPLTEFLFGLTAIFVFYVSESLLGTFCLLFFFGHLLIAMLTDSKKLSLDYENLPFLIG
FGFGSNYFLFEETIGLSHLYVYLGFLIFYLLIYLLLRGGTGLGDVLFSPIFASIAGNPFWIVYFNSAYLLAVGFSLILRK
KGETLKGKKVPMGLYFSLGIFFTFFFKLIVHYYEWEGFLNYGNIE

Sequences:

>Translated_285_residues
MESLVESNWYFLSTGLAYVILFFFATSLASFYTTLGDRILYYCYEKGRKTFQGIERWKVIFSKPSHCPSCQTNVTKLYLV
PIFGWFFTKGKCNNCKVEIPKLYPLTEFLFGLTAIFVFYVSESLLGTFCLLFFFGHLLIAMLTDSKKLSLDYENLPFLIG
FGFGSNYFLFEETIGLSHLYVYLGFLIFYLLIYLLLRGGTGLGDVLFSPIFASIAGNPFWIVYFNSAYLLAVGFSLILRK
KGETLKGKKVPMGLYFSLGIFFTFFFKLIVHYYEWEGFLNYGNIE
>Mature_285_residues
MESLVESNWYFLSTGLAYVILFFFATSLASFYTTLGDRILYYCYEKGRKTFQGIERWKVIFSKPSHCPSCQTNVTKLYLV
PIFGWFFTKGKCNNCKVEIPKLYPLTEFLFGLTAIFVFYVSESLLGTFCLLFFFGHLLIAMLTDSKKLSLDYENLPFLIG
FGFGSNYFLFEETIGLSHLYVYLGFLIFYLLIYLLLRGGTGLGDVLFSPIFASIAGNPFWIVYFNSAYLLAVGFSLILRK
KGETLKGKKVPMGLYFSLGIFFTFFFKLIVHYYEWEGFLNYGNIE

Specific function: Unknown

COG id: COG1989

COG function: function code NOU; Type II secretory pathway, prepilin signal peptidase PulO and related peptidases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A24 family [H]

Homologues:

Organism=Escherichia coli, GI87082194, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010627
- InterPro:   IPR014032
- InterPro:   IPR000045 [H]

Pfam domain/function: PF06750 DiS_P_DiS; PF01478 Peptidase_A24 [H]

EC number: NA

Molecular weight: Translated: 32907; Mature: 32907

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESLVESNWYFLSTGLAYVILFFFATSLASFYTTLGDRILYYCYEKGRKTFQGIERWKVI
CCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSKPSHCPSCQTNVTKLYLVPIFGWFFTKGKCNNCKVEIPKLYPLTEFLFGLTAIFVFYV
HCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHH
SESLLGTFCLLFFFGHLLIAMLTDSKKLSLDYENLPFLIGFGFGSNYFLFEETIGLSHLY
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCEEEEEHHCCHHHHH
VYLGFLIFYLLIYLLLRGGTGLGDVLFSPIFASIAGNPFWIVYFNSAYLLAVGFSLILRK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHC
KGETLKGKKVPMGLYFSLGIFFTFFFKLIVHYYEWEGFLNYGNIE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCC
>Mature Secondary Structure
MESLVESNWYFLSTGLAYVILFFFATSLASFYTTLGDRILYYCYEKGRKTFQGIERWKVI
CCCCHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSKPSHCPSCQTNVTKLYLVPIFGWFFTKGKCNNCKVEIPKLYPLTEFLFGLTAIFVFYV
HCCCCCCCCCCCCCCEEEEEEHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHH
SESLLGTFCLLFFFGHLLIAMLTDSKKLSLDYENLPFLIGFGFGSNYFLFEETIGLSHLY
HHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCCCEEEEEHHCCHHHHH
VYLGFLIFYLLIYLLLRGGTGLGDVLFSPIFASIAGNPFWIVYFNSAYLLAVGFSLILRK
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHC
KGETLKGKKVPMGLYFSLGIFFTFFFKLIVHYYEWEGFLNYGNIE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]