| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is expZ [H]
Identifier: 183220747
GI number: 183220747
Start: 1413107
End: 1414615
Strand: Direct
Name: expZ [H]
Synonym: LEPBI_I1357
Alternate gene names: 183220747
Gene position: 1413107-1414615 (Clockwise)
Preceding gene: 183220746
Following gene: 183220748
Centisome position: 39.26
GC content: 41.62
Gene sequence:
>1509_bases ATGTCCAAAACCCTTCGCATTCATAACGGAACCTTTCGTTACGAAACCCACTCTTCACCCATCTTTGAAAACTTGAATGT CCACTTTTCATCGGGTTGGACCGGACTTATTGGCAAAAATGGAAGTGGTAAGTCAACTCTTGCCAAAATCATTTCACGTG AACTTACGTTAGACGAAGGATCGATCATCGGTTCGCACCATGTATTGTATCTTTCTCAAGGAACTGAAATGGAGTTAGAA GAGTTGAGAGAGTTTTTCTACGATGATTCCAAAGAGACTGGATTTTGGAAAAGCCTATTGCAAATCAAAATCCAACAAGC CGAGGATTATGAAACTCTAAGTTTTGGTGAAAAACGAAAACTTCTCCTTTCTCAAATTCTATCAAAAAAACCAGAGGTTC TCATCCTTGATGAACCAACGAACCATTTGGATTTGAAAAGCCAAATGATCCTGCGTGAAGCCATGCGGGCATATAATGGG ATTGGGATTTTGATTAGCCACGACAGGTCATTGTTAGATGAGGTGACTTCGTCGTGTATCTTTCTTGAAAAAAACTTTTT GGAGCAAAGGCCCGGAAATTATTCGGAAGGCAAACGCGAAAGAGACAAAGAGGCAAAGGCCAGGATCCACCAATGGCAAA CCGCCAAAGTAGAACGGAAAAAATTGGAGAAGGAATGGAAACGGAGAAGGGAAGAAGCAAACCTTTCCCACAACAAAAGG TCCAAAAAAGGATTGGATCTCCATGACCATGATGGGAGGGCTAAAAAAGATTTAGTTCGAGTTTCTGGTAAAGATGGACA GGCAGGCCGATTAAAAAACCAAATCGAACGTAGGACAGAGATAAGCGCCGAAAGGGAAAAACAAATTTGGGAAACTTTGC CAGAAAAAGAAACGATTGGCATCGAGTGGCAGAATCTTCAAACAAAACGGAACCATTTGTTTTTGTATGAAGGTGAAAGG TTAGTCCTTCCTTTTCTCTCTTTGGAATTAGAGTTCCATTTATCGATTCGATCCCAATCGAGGATTGCAGTCACAGGTGC GAATGGTTCGGGTAAATCGAGTTTGTTAAGGCATCTTATCGAAGATTTTAAGGAAAGAAAAATTGCAACCGTTTACCTCC CTCAAGAATTTTCAAAACAGGAACTTACGGTTTTACTCCAAACCTTTCAATCCTCAAATGATTCGAAACAGGCAGACATA CTTTCCATTGTCCATCGATTGGGAGGTGATCCCAAACGATTTTTGGAATCGGAGGCTTTGAGCCCAGGTGAAGGAAAAAA ACTTTTCCTGGCACTCCATCTCGATACGTATCCAGAGGTGCTTGTCTTAGACGAACCAACCAACCATTTGGATTTAAAAT CGATTGAAGCATTGGAAACATCCTTACAAGAATGGAAGGGGACACTCATCCTTGTGAGCCATGACCAGAGGTTTCTCCAA ACCTTGGCAAGTGAGGAGTGGGATTTGGAAAACTTCCGGCTCAGACAAAAACATCTAGACAGAATCTAA
Upstream 100 bases:
>100_bases TAAGCAAAAAAAAACAAACCAACATTTCCACTTCTCCTGAATCAAATTAGGACAAGACTTGCTTACCGTTTTCAATTGGA AACTTTTAGGAGCATGTTTT
Downstream 100 bases:
>100_bases GCATTGTACTTAGAATAATTCTAAGGAGTGACATTATGCCACAAGTGACATCACATGCCCCTGATTTTAAAGCAACCGCA GTGATCGGGGACAGTTTCAA
Product: ABC transporter ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 502; Mature: 501
Protein sequence:
>502_residues MSKTLRIHNGTFRYETHSSPIFENLNVHFSSGWTGLIGKNGSGKSTLAKIISRELTLDEGSIIGSHHVLYLSQGTEMELE ELREFFYDDSKETGFWKSLLQIKIQQAEDYETLSFGEKRKLLLSQILSKKPEVLILDEPTNHLDLKSQMILREAMRAYNG IGILISHDRSLLDEVTSSCIFLEKNFLEQRPGNYSEGKRERDKEAKARIHQWQTAKVERKKLEKEWKRRREEANLSHNKR SKKGLDLHDHDGRAKKDLVRVSGKDGQAGRLKNQIERRTEISAEREKQIWETLPEKETIGIEWQNLQTKRNHLFLYEGER LVLPFLSLELEFHLSIRSQSRIAVTGANGSGKSSLLRHLIEDFKERKIATVYLPQEFSKQELTVLLQTFQSSNDSKQADI LSIVHRLGGDPKRFLESEALSPGEGKKLFLALHLDTYPEVLVLDEPTNHLDLKSIEALETSLQEWKGTLILVSHDQRFLQ TLASEEWDLENFRLRQKHLDRI
Sequences:
>Translated_502_residues MSKTLRIHNGTFRYETHSSPIFENLNVHFSSGWTGLIGKNGSGKSTLAKIISRELTLDEGSIIGSHHVLYLSQGTEMELE ELREFFYDDSKETGFWKSLLQIKIQQAEDYETLSFGEKRKLLLSQILSKKPEVLILDEPTNHLDLKSQMILREAMRAYNG IGILISHDRSLLDEVTSSCIFLEKNFLEQRPGNYSEGKRERDKEAKARIHQWQTAKVERKKLEKEWKRRREEANLSHNKR SKKGLDLHDHDGRAKKDLVRVSGKDGQAGRLKNQIERRTEISAEREKQIWETLPEKETIGIEWQNLQTKRNHLFLYEGER LVLPFLSLELEFHLSIRSQSRIAVTGANGSGKSSLLRHLIEDFKERKIATVYLPQEFSKQELTVLLQTFQSSNDSKQADI LSIVHRLGGDPKRFLESEALSPGEGKKLFLALHLDTYPEVLVLDEPTNHLDLKSIEALETSLQEWKGTLILVSHDQRFLQ TLASEEWDLENFRLRQKHLDRI >Mature_501_residues SKTLRIHNGTFRYETHSSPIFENLNVHFSSGWTGLIGKNGSGKSTLAKIISRELTLDEGSIIGSHHVLYLSQGTEMELEE LREFFYDDSKETGFWKSLLQIKIQQAEDYETLSFGEKRKLLLSQILSKKPEVLILDEPTNHLDLKSQMILREAMRAYNGI GILISHDRSLLDEVTSSCIFLEKNFLEQRPGNYSEGKRERDKEAKARIHQWQTAKVERKKLEKEWKRRREEANLSHNKRS KKGLDLHDHDGRAKKDLVRVSGKDGQAGRLKNQIERRTEISAEREKQIWETLPEKETIGIEWQNLQTKRNHLFLYEGERL VLPFLSLELEFHLSIRSQSRIAVTGANGSGKSSLLRHLIEDFKERKIATVYLPQEFSKQELTVLLQTFQSSNDSKQADIL SIVHRLGGDPKRFLESEALSPGEGKKLFLALHLDTYPEVLVLDEPTNHLDLKSIEALETSLQEWKGTLILVSHDQRFLQT LASEEWDLENFRLRQKHLDRI
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=407, Percent_Identity=25.5528255528256, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI10947135, Length=548, Percent_Identity=24.8175182481752, Blast_Score=109, Evalue=8e-24, Organism=Homo sapiens, GI69354671, Length=548, Percent_Identity=24.8175182481752, Blast_Score=108, Evalue=9e-24, Organism=Homo sapiens, GI27881506, Length=204, Percent_Identity=29.4117647058824, Blast_Score=77, Evalue=6e-14, Organism=Homo sapiens, GI10947137, Length=204, Percent_Identity=29.4117647058824, Blast_Score=76, Evalue=6e-14, Organism=Escherichia coli, GI1787041, Length=534, Percent_Identity=28.8389513108614, Blast_Score=145, Evalue=4e-36, Organism=Escherichia coli, GI1787182, Length=535, Percent_Identity=26.5420560747664, Blast_Score=143, Evalue=3e-35, Organism=Escherichia coli, GI1789751, Length=517, Percent_Identity=26.1121856866538, Blast_Score=122, Evalue=6e-29, Organism=Escherichia coli, GI2367384, Length=553, Percent_Identity=26.4014466546112, Blast_Score=115, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17555318, Length=523, Percent_Identity=25.4302103250478, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17553372, Length=392, Percent_Identity=26.0204081632653, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17559834, Length=567, Percent_Identity=23.2804232804233, Blast_Score=103, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6321121, Length=405, Percent_Identity=26.4197530864197, Blast_Score=111, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6320874, Length=515, Percent_Identity=24.2718446601942, Blast_Score=106, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6325030, Length=79, Percent_Identity=39.2405063291139, Blast_Score=71, Evalue=5e-13, Organism=Saccharomyces cerevisiae, GI6324314, Length=178, Percent_Identity=31.4606741573034, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6323278, Length=171, Percent_Identity=29.8245614035088, Blast_Score=67, Evalue=6e-12, Organism=Drosophila melanogaster, GI24666836, Length=404, Percent_Identity=28.4653465346535, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI24642252, Length=412, Percent_Identity=26.9417475728155, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI18859989, Length=412, Percent_Identity=26.9417475728155, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24641342, Length=551, Percent_Identity=24.1379310344828, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 58125; Mature: 57994
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTLRIHNGTFRYETHSSPIFENLNVHFSSGWTGLIGKNGSGKSTLAKIISRELTLDEG CCCEEEEECCEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCC SIIGSHHVLYLSQGTEMELEELREFFYDDSKETGFWKSLLQIKIQQAEDYETLSFGEKRK CEECCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCHHHH LLLSQILSKKPEVLILDEPTNHLDLKSQMILREAMRAYNGIGILISHDRSLLDEVTSSCI HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHEE FLEKNFLEQRPGNYSEGKRERDKEAKARIHQWQTAKVERKKLEKEWKRRREEANLSHNKR EHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SKKGLDLHDHDGRAKKDLVRVSGKDGQAGRLKNQIERRTEISAEREKQIWETLPEKETIG CCCCCCCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC IEWQNLQTKRNHLFLYEGERLVLPFLSLELEFHLSIRSQSRIAVTGANGSGKSSLLRHLI EEECCCCCCCCEEEEEECCEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHH EDFKERKIATVYLPQEFSKQELTVLLQTFQSSNDSKQADILSIVHRLGGDPKRFLESEAL HHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC SPGEGKKLFLALHLDTYPEVLVLDEPTNHLDLKSIEALETSLQEWKGTLILVSHDQRFLQ CCCCCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHH TLASEEWDLENFRLRQKHLDRI HHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure SKTLRIHNGTFRYETHSSPIFENLNVHFSSGWTGLIGKNGSGKSTLAKIISRELTLDEG CCEEEEECCEEEEECCCCCCCCCCEEEECCCEEEEECCCCCCHHHHHHHHHHHCCCCCC SIIGSHHVLYLSQGTEMELEELREFFYDDSKETGFWKSLLQIKIQQAEDYETLSFGEKRK CEECCEEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHCCCHHHH LLLSQILSKKPEVLILDEPTNHLDLKSQMILREAMRAYNGIGILISHDRSLLDEVTSSCI HHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHEE FLEKNFLEQRPGNYSEGKRERDKEAKARIHQWQTAKVERKKLEKEWKRRREEANLSHNKR EHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC SKKGLDLHDHDGRAKKDLVRVSGKDGQAGRLKNQIERRTEISAEREKQIWETLPEKETIG CCCCCCCCCCCCCHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC IEWQNLQTKRNHLFLYEGERLVLPFLSLELEFHLSIRSQSRIAVTGANGSGKSSLLRHLI EEECCCCCCCCEEEEEECCEEEEEEEEEEEEEEEEECCCCEEEEEECCCCCHHHHHHHHH EDFKERKIATVYLPQEFSKQELTVLLQTFQSSNDSKQADILSIVHRLGGDPKRFLESEAL HHHHHCCEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCC SPGEGKKLFLALHLDTYPEVLVLDEPTNHLDLKSIEALETSLQEWKGTLILVSHDQRFLQ CCCCCCEEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCHHHHH TLASEEWDLENFRLRQKHLDRI HHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]