| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220645
Identifier: 183220645
GI number: 183220645
Start: 1298141
End: 1298818
Strand: Direct
Name: 183220645
Synonym: LEPBI_I1253
Alternate gene names: NA
Gene position: 1298141-1298818 (Clockwise)
Preceding gene: 183220644
Following gene: 183220646
Centisome position: 36.06
GC content: 38.64
Gene sequence:
>678_bases ATGAGTAAACGGTTTATTGGAATTATTTCGATTTGTGGTTTTTTCTTAGTATTGTTTGGTATCACCATTTGGAAGTTTAC TTCTGAAAAAAACAAACAAACGACTGTTGTGTCAAATTCCGATTTTGGCAGTTCAGAAAAACATGCAAATTCGTTATTTG ATGATCCAGAATTTGCAGATGCTCCCAATCCAGAAGAATTGGAATTGGCACAAGCCGAAGTACTTTGGCCGTTTGCTCTC GAAAAAAAACCAAATCGTAAGGAAGAAGTCAAAGAGGAATGGAGGGATTTTGCGGCGAAATATCCCAACAATTTCTACAT CCCTCGTGAAATTCGTGCACCTATGACAGAAAAACAAGAAAAGGAACAACTGGAAATGTTGGATTCTTTCACTGCCATGG ATGCAACGTTTTCTGCAAATCAATCAAAGGAAAAATGGTCTGACAAACCATCCGCAGAAGAACCAAGTACTGCTGAACGT CCTTCGCCCAATACGCAGAAAGCCTATTTCGATTTCAAAATCAACGAATTGGAATCTAGGATCCAAATGGTTGAGTATTG GTTGGAAAATAAAAAACCGGACAGTGATGTCAAAGGTTCTGCAGAGAAAGACTTACAAATTTGGAAAAAAGAACTCGCAA CACTCCGAGAAGTGAGAAGCCAAGTTCCGAATACATAA
Upstream 100 bases:
>100_bases CAACAGAAACCCAGTGGATCTGAAAAAATTCTTAACTGAGAATATTTTTGGTCAGGCTATTTCTTGGGTAGTATCCATCT TTACGTAAGAGGTTAGGACG
Downstream 100 bases:
>100_bases GTTTATATAAAATACTAAAAAAAGCCTCTTTTTGTTAAGAGGCTTTTTGTTTTACAATTCCCATTCCATTTGATTTCATA CACCCATGCACAAATTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 225; Mature: 224
Protein sequence:
>225_residues MSKRFIGIISICGFFLVLFGITIWKFTSEKNKQTTVVSNSDFGSSEKHANSLFDDPEFADAPNPEELELAQAEVLWPFAL EKKPNRKEEVKEEWRDFAAKYPNNFYIPREIRAPMTEKQEKEQLEMLDSFTAMDATFSANQSKEKWSDKPSAEEPSTAER PSPNTQKAYFDFKINELESRIQMVEYWLENKKPDSDVKGSAEKDLQIWKKELATLREVRSQVPNT
Sequences:
>Translated_225_residues MSKRFIGIISICGFFLVLFGITIWKFTSEKNKQTTVVSNSDFGSSEKHANSLFDDPEFADAPNPEELELAQAEVLWPFAL EKKPNRKEEVKEEWRDFAAKYPNNFYIPREIRAPMTEKQEKEQLEMLDSFTAMDATFSANQSKEKWSDKPSAEEPSTAER PSPNTQKAYFDFKINELESRIQMVEYWLENKKPDSDVKGSAEKDLQIWKKELATLREVRSQVPNT >Mature_224_residues SKRFIGIISICGFFLVLFGITIWKFTSEKNKQTTVVSNSDFGSSEKHANSLFDDPEFADAPNPEELELAQAEVLWPFALE KKPNRKEEVKEEWRDFAAKYPNNFYIPREIRAPMTEKQEKEQLEMLDSFTAMDATFSANQSKEKWSDKPSAEEPSTAERP SPNTQKAYFDFKINELESRIQMVEYWLENKKPDSDVKGSAEKDLQIWKKELATLREVRSQVPNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26105; Mature: 25974
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRFIGIISICGFFLVLFGITIWKFTSEKNKQTTVVSNSDFGSSEKHANSLFDDPEFAD CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCC APNPEELELAQAEVLWPFALEKKPNRKEEVKEEWRDFAAKYPNNFYIPREIRAPMTEKQE CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHH KEQLEMLDSFTAMDATFSANQSKEKWSDKPSAEEPSTAERPSPNTQKAYFDFKINELESR HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHH IQMVEYWLENKKPDSDVKGSAEKDLQIWKKELATLREVRSQVPNT HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SKRFIGIISICGFFLVLFGITIWKFTSEKNKQTTVVSNSDFGSSEKHANSLFDDPEFAD CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCCCCCCC APNPEELELAQAEVLWPFALEKKPNRKEEVKEEWRDFAAKYPNNFYIPREIRAPMTEKQE CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCHHHH KEQLEMLDSFTAMDATFSANQSKEKWSDKPSAEEPSTAERPSPNTQKAYFDFKINELESR HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHH IQMVEYWLENKKPDSDVKGSAEKDLQIWKKELATLREVRSQVPNT HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA