| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220644
Identifier: 183220644
GI number: 183220644
Start: 1296863
End: 1298128
Strand: Direct
Name: 183220644
Synonym: LEPBI_I1252
Alternate gene names: NA
Gene position: 1296863-1298128 (Clockwise)
Preceding gene: 183220643
Following gene: 183220645
Centisome position: 36.03
GC content: 43.13
Gene sequence:
>1266_bases ATGAACACAAAAAAAGCATTCGGATTGGTGCTCGCTTTGGTATTGGCAGGTTCTTTGTCTGCACAAACACAAAGCCAGAT GTTCCAAAAAGTAGGTGTCATCGGGGATTCCTTGAGCCAAGGTTTCTTTGGGGTCACTGTTGAGAAAAAAACACAAGATT GGGCTTACCCAGTCCTTGTATCGAAACAAGCAGGCGCTTCCGTTTCGTACAATGTTCTGAAAGGGCCATTCGTAAACTTA GAAGATGTACTCAAGTGGGATTGTGGTATTTTTTGCATCGCAGAAAGTATCATCGGTGGAAACAAATCCACAGTGTCCTT ACCAACTCACGCTGGGATCACGGGTGCTGAATACACGACTGTTCTCAGAACCTCTGGTAAATGTGAGGACGTCAATGCCA CCAAACAAGCGAAAGAATGGTATTGGGCAAAATGGTATTGGTACACTTACCGTTGGGTGACCGTTGCTGATTGTAAAGAA CCAGACAAATTCCACCGTTTTGGTTTGCGTGATGCGGGAACACAAGCCCAAGTCATGGAAAAAGTAAAACCAACTTTCCT TTTTGGATCCGCAGGTGCGAACCACGTACTTTGTACGGCACTCCATACCTCCACTGATTGTTTAGATGAAACTCGTTTCA AAAGAGACATTCGTGAATTTTTCCGCAGAATGGCTGGTATGGGAAGTTTAAAAGGTGGTGTGTTGTTTACTGTTCCAAAC GTAACAGCAATCGCATTCCTTGAGACTTACAGAGATCCCAATGGACGTGCAAACTACTCTGGACTCAAAGCTTTCTTTAG AAATTCTGTTTCCAACCCGAACCAAGTTTTGGATGCAACGGAAGTCGCAACCATTTCAACATTCTTAAACATGTTGAACA ATGAAATCAAAGCCCAAGCTGCAACGATGCGTTTTGCTGTGGCTGACCTTCGTGTGATCTTTGATGACCTCAAAGAAAAT GGACGACCAATTCGAAGTGCTTCTGGATGGTCTCCAGGTAATGCGCGTGCCAATTGGCCACTTCCTAACCAACCAGGTGT GTTTGGTTTAGATGGTGTTCACCCGAATATGTATGGTCATTCCTTGTTTGCAAATGAGTTAATTAAAGCAATTAACACTC GTTACGGATATTCTATCCCGCAAGTGAGTGAATACACTGCATGGTATTACGATACACTCAACAGAAACCCAGTGGATCTG AAAAAATTCTTAACTGAGAATATTTTTGGTCAGGCTATTTCTTGGGTAGTATCCATCTTTACGTAA
Upstream 100 bases:
>100_bases CATTGGTTCGGAAATAAATTATTTGACACTCGTTCAAAAAAGACACCAAAATGTCTCAATTGTTCAAAGTATGTTAAAAA TGTTCCGATTGGGAGGAAAT
Downstream 100 bases:
>100_bases GAGGTTAGGACGATGAGTAAACGGTTTATTGGAATTATTTCGATTTGTGGTTTTTTCTTAGTATTGTTTGGTATCACCAT TTGGAAGTTTACTTCTGAAA
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MNTKKAFGLVLALVLAGSLSAQTQSQMFQKVGVIGDSLSQGFFGVTVEKKTQDWAYPVLVSKQAGASVSYNVLKGPFVNL EDVLKWDCGIFCIAESIIGGNKSTVSLPTHAGITGAEYTTVLRTSGKCEDVNATKQAKEWYWAKWYWYTYRWVTVADCKE PDKFHRFGLRDAGTQAQVMEKVKPTFLFGSAGANHVLCTALHTSTDCLDETRFKRDIREFFRRMAGMGSLKGGVLFTVPN VTAIAFLETYRDPNGRANYSGLKAFFRNSVSNPNQVLDATEVATISTFLNMLNNEIKAQAATMRFAVADLRVIFDDLKEN GRPIRSASGWSPGNARANWPLPNQPGVFGLDGVHPNMYGHSLFANELIKAINTRYGYSIPQVSEYTAWYYDTLNRNPVDL KKFLTENIFGQAISWVVSIFT
Sequences:
>Translated_421_residues MNTKKAFGLVLALVLAGSLSAQTQSQMFQKVGVIGDSLSQGFFGVTVEKKTQDWAYPVLVSKQAGASVSYNVLKGPFVNL EDVLKWDCGIFCIAESIIGGNKSTVSLPTHAGITGAEYTTVLRTSGKCEDVNATKQAKEWYWAKWYWYTYRWVTVADCKE PDKFHRFGLRDAGTQAQVMEKVKPTFLFGSAGANHVLCTALHTSTDCLDETRFKRDIREFFRRMAGMGSLKGGVLFTVPN VTAIAFLETYRDPNGRANYSGLKAFFRNSVSNPNQVLDATEVATISTFLNMLNNEIKAQAATMRFAVADLRVIFDDLKEN GRPIRSASGWSPGNARANWPLPNQPGVFGLDGVHPNMYGHSLFANELIKAINTRYGYSIPQVSEYTAWYYDTLNRNPVDL KKFLTENIFGQAISWVVSIFT >Mature_421_residues MNTKKAFGLVLALVLAGSLSAQTQSQMFQKVGVIGDSLSQGFFGVTVEKKTQDWAYPVLVSKQAGASVSYNVLKGPFVNL EDVLKWDCGIFCIAESIIGGNKSTVSLPTHAGITGAEYTTVLRTSGKCEDVNATKQAKEWYWAKWYWYTYRWVTVADCKE PDKFHRFGLRDAGTQAQVMEKVKPTFLFGSAGANHVLCTALHTSTDCLDETRFKRDIREFFRRMAGMGSLKGGVLFTVPN VTAIAFLETYRDPNGRANYSGLKAFFRNSVSNPNQVLDATEVATISTFLNMLNNEIKAQAATMRFAVADLRVIFDDLKEN GRPIRSASGWSPGNARANWPLPNQPGVFGLDGVHPNMYGHSLFANELIKAINTRYGYSIPQVSEYTAWYYDTLNRNPVDL KKFLTENIFGQAISWVVSIFT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46778; Mature: 46778
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTKKAFGLVLALVLAGSLSAQTQSQMFQKVGVIGDSLSQGFFGVTVEKKTQDWAYPVLV CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCCEEEEEEECCCCCCCCCEEE SKQAGASVSYNVLKGPFVNLEDVLKWDCGIFCIAESIIGGNKSTVSLPTHAGITGAEYTT ECCCCCCEEEEECCCCCCCHHHHHHHCCCHHEEHHHHHCCCCCEEECCCCCCCCCCHHEE VLRTSGKCEDVNATKQAKEWYWAKWYWYTYRWVTVADCKEPDKFHRFGLRDAGTQAQVME EEECCCCCCCCCHHHHHHHCEEEEEEEEEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHH KVKPTFLFGSAGANHVLCTALHTSTDCLDETRFKRDIREFFRRMAGMGSLKGGVLFTVPN HCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC VTAIAFLETYRDPNGRANYSGLKAFFRNSVSNPNQVLDATEVATISTFLNMLNNEIKAQA HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATMRFAVADLRVIFDDLKENGRPIRSASGWSPGNARANWPLPNQPGVFGLDGVHPNMYGH HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHH SLFANELIKAINTRYGYSIPQVSEYTAWYYDTLNRNPVDLKKFLTENIFGQAISWVVSIF HHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC T C >Mature Secondary Structure MNTKKAFGLVLALVLAGSLSAQTQSQMFQKVGVIGDSLSQGFFGVTVEKKTQDWAYPVLV CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHCCCEEEEEEECCCCCCCCCEEE SKQAGASVSYNVLKGPFVNLEDVLKWDCGIFCIAESIIGGNKSTVSLPTHAGITGAEYTT ECCCCCCEEEEECCCCCCCHHHHHHHCCCHHEEHHHHHCCCCCEEECCCCCCCCCCHHEE VLRTSGKCEDVNATKQAKEWYWAKWYWYTYRWVTVADCKEPDKFHRFGLRDAGTQAQVME EEECCCCCCCCCHHHHHHHCEEEEEEEEEEEEEEEECCCCCHHHHHCCCCCCCCHHHHHH KVKPTFLFGSAGANHVLCTALHTSTDCLDETRFKRDIREFFRRMAGMGSLKGGVLFTVPN HCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC VTAIAFLETYRDPNGRANYSGLKAFFRNSVSNPNQVLDATEVATISTFLNMLNNEIKAQA HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATMRFAVADLRVIFDDLKENGRPIRSASGWSPGNARANWPLPNQPGVFGLDGVHPNMYGH HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCHHH SLFANELIKAINTRYGYSIPQVSEYTAWYYDTLNRNPVDLKKFLTENIFGQAISWVVSIF HHHHHHHHHHHHHHCCCCCCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC T C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA