| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183220646
Identifier: 183220646
GI number: 183220646
Start: 1298904
End: 1300466
Strand: Direct
Name: 183220646
Synonym: LEPBI_I1254
Alternate gene names: NA
Gene position: 1298904-1300466 (Clockwise)
Preceding gene: 183220645
Following gene: 183220649
Centisome position: 36.08
GC content: 41.46
Gene sequence:
>1563_bases ATGCACAAATTCCATACATTATTCATTTTTCTCATACTAATTTCGTTTCACCAAAATTGTTTTGGTGGTCCAAGCGAACC AGAAACTCCGGAGGTTTTGCCTGTGGAAGAAGAGATCCCAACAGACGTTCTTTTGAAAACTTTAGATTCTGGTTCCAATT TTGATAAAGGACAAGCCGCCATCCAACTTGGCAATCGAGGGGTAACAAAGGCAATTCCTATCTTACGAAAGATGTTAAGT GATAAAGATCCAGGCCTTAGGGCAGGGGCCGCCATTGCACTTGGGGATTTAAAAGATAAACCTTCGTCAACGAACATTGC CAATTTAATGTGGACTGATACAGAAAATCCAAAGGATGTATATTTGGATGCCTTGACTCGAATGAAAGATACATCGATTG TGGGGCGCATTTATCCTTTGTTAAATGACAATAATGCAACACTTCGATTGCAAACGGTTGATTCCTTAGTTCAGATTGGT GCTAACTCCGTAGGTTCTCAAATTTTGGCGATGGCACAAAAAAACAAAGATCGAGAAAAAGACAAAACCTTTGCGATGGC TCTTGGCAAATTAAAAGTTGCTTCGGCTGAGTCGTATTTACTTGGTTTGACGAAACTCCAAGATGAATCACCAACACTTG CAGCTTCTTACCTGGCTCTAGGAAGGATCAAGGCAAAAAATGCAAATGATGTTTTGGTGAGAGCACTCACTTTGCCTTAT GACAAAGGAAAGGAAAATGCTTCGATGGCATTGATCGAAATCGCAAATCCAAAGATTGTCCCGCAGGTATTCGCTGTTTT AAAATCTGACAATTTAGAATCAAAAATGTATGCTACAGACGTATTATGTGCGATCCCATCAAAAGAAGCATCCAAATTAG CCTTCGGATTATTAAATTCAACTGATGCGAAAAACTGGGGTTATGCGGCAAAAATTGTTGGCCGGCAAAAGTACAAAGAA GCAAAAAATCGTTTGGAAGAATTACTAGTAAAACCAAACACACCAGAACGTGACAATTTTGCGGAAGCACTTGGATGGAT TGGTGACCCAAGTTCCGTTCCAGTCTTACGAAAGGTGTTACTCTCTGGTGAAACAGACGGGCCATATGGTTCGGCTTGGG CACTCGGTGTGATGGGTGCAAAGGAAGCTGTTCCAGATCTTCTCCTTGCCTTAGACAAAGGGGATGCAAAACTTTTAGGG TATGCACTTGAGGCTCTTGGTTCGATTGCTGATCCGAGTAGTTTGCCAAAACTAAAAGAACTTTTAGCTGAAAGACCGAA AATGGCTCCGCAAATTTTATCCACAGTGGCACTGATCCCAAGCGATGAAGCAAGACTTCTCATCGAAGAGGCGACTCGTT CTAAAAATGCAGAAGTGTATCGCCCAGCCATGGAAGAAATCGCCAAACGGAAAGATAAAAAATCCATTCCAGTCCTTCTA CAGTTTGCCAATGGAGATGATGCCGAAAAACGAAAGTTAAGTTATTATGCTCTCACTGCTATCACTGGTGAAAAATTTAG AACCGCAAAAGAATGGAATCTTTGGGTGAAGGCAAATCCTTAG
Upstream 100 bases:
>100_bases GTTCCGAATACATAAGTTTATATAAAATACTAAAAAAAGCCTCTTTTTGTTAAGAGGCTTTTTGTTTTACAATTCCCATT CCATTTGATTTCATACACCC
Downstream 100 bases:
>100_bases ATTGAAACGAATCTCTTCTGGTGGATTTCAGTGATCCTTCTTTCTTTTTGGAAAATCTGAAACCCCAGAAGAATACTGTC AAATTTGTCTTAAGAATGCA
Product: HEAT-like repeat-containing protein
Products: NA
Alternate protein names: HEAT-Like Repeat-Containing Protein; Peptidase; Signal Transduction Protein
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MHKFHTLFIFLILISFHQNCFGGPSEPETPEVLPVEEEIPTDVLLKTLDSGSNFDKGQAAIQLGNRGVTKAIPILRKMLS DKDPGLRAGAAIALGDLKDKPSSTNIANLMWTDTENPKDVYLDALTRMKDTSIVGRIYPLLNDNNATLRLQTVDSLVQIG ANSVGSQILAMAQKNKDREKDKTFAMALGKLKVASAESYLLGLTKLQDESPTLAASYLALGRIKAKNANDVLVRALTLPY DKGKENASMALIEIANPKIVPQVFAVLKSDNLESKMYATDVLCAIPSKEASKLAFGLLNSTDAKNWGYAAKIVGRQKYKE AKNRLEELLVKPNTPERDNFAEALGWIGDPSSVPVLRKVLLSGETDGPYGSAWALGVMGAKEAVPDLLLALDKGDAKLLG YALEALGSIADPSSLPKLKELLAERPKMAPQILSTVALIPSDEARLLIEEATRSKNAEVYRPAMEEIAKRKDKKSIPVLL QFANGDDAEKRKLSYYALTAITGEKFRTAKEWNLWVKANP
Sequences:
>Translated_520_residues MHKFHTLFIFLILISFHQNCFGGPSEPETPEVLPVEEEIPTDVLLKTLDSGSNFDKGQAAIQLGNRGVTKAIPILRKMLS DKDPGLRAGAAIALGDLKDKPSSTNIANLMWTDTENPKDVYLDALTRMKDTSIVGRIYPLLNDNNATLRLQTVDSLVQIG ANSVGSQILAMAQKNKDREKDKTFAMALGKLKVASAESYLLGLTKLQDESPTLAASYLALGRIKAKNANDVLVRALTLPY DKGKENASMALIEIANPKIVPQVFAVLKSDNLESKMYATDVLCAIPSKEASKLAFGLLNSTDAKNWGYAAKIVGRQKYKE AKNRLEELLVKPNTPERDNFAEALGWIGDPSSVPVLRKVLLSGETDGPYGSAWALGVMGAKEAVPDLLLALDKGDAKLLG YALEALGSIADPSSLPKLKELLAERPKMAPQILSTVALIPSDEARLLIEEATRSKNAEVYRPAMEEIAKRKDKKSIPVLL QFANGDDAEKRKLSYYALTAITGEKFRTAKEWNLWVKANP >Mature_520_residues MHKFHTLFIFLILISFHQNCFGGPSEPETPEVLPVEEEIPTDVLLKTLDSGSNFDKGQAAIQLGNRGVTKAIPILRKMLS DKDPGLRAGAAIALGDLKDKPSSTNIANLMWTDTENPKDVYLDALTRMKDTSIVGRIYPLLNDNNATLRLQTVDSLVQIG ANSVGSQILAMAQKNKDREKDKTFAMALGKLKVASAESYLLGLTKLQDESPTLAASYLALGRIKAKNANDVLVRALTLPY DKGKENASMALIEIANPKIVPQVFAVLKSDNLESKMYATDVLCAIPSKEASKLAFGLLNSTDAKNWGYAAKIVGRQKYKE AKNRLEELLVKPNTPERDNFAEALGWIGDPSSVPVLRKVLLSGETDGPYGSAWALGVMGAKEAVPDLLLALDKGDAKLLG YALEALGSIADPSSLPKLKELLAERPKMAPQILSTVALIPSDEARLLIEEATRSKNAEVYRPAMEEIAKRKDKKSIPVLL QFANGDDAEKRKLSYYALTAITGEKFRTAKEWNLWVKANP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56726; Mature: 56726
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: PS50077 HEAT_REPEAT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKFHTLFIFLILISFHQNCFGGPSEPETPEVLPVEEEIPTDVLLKTLDSGSNFDKGQAA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHHCCHHHHHHHHCCCCCCCCCHHH IQLGNRGVTKAIPILRKMLSDKDPGLRAGAAIALGDLKDKPSSTNIANLMWTDTENPKDV EEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHH YLDALTRMKDTSIVGRIYPLLNDNNATLRLQTVDSLVQIGANSVGSQILAMAQKNKDREK HHHHHHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH DKTFAMALGKLKVASAESYLLGLTKLQDESPTLAASYLALGRIKAKNANDVLVRALTLPY HHHHHHHHHHEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCEECCCCCCEEEEEEECCC DKGKENASMALIEIANPKIVPQVFAVLKSDNLESKMYATDVLCAIPSKEASKLAFGLLNS CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHEECCCCHHHHHHHHHHCC TDAKNWGYAAKIVGRQKYKEAKNRLEELLVKPNTPERDNFAEALGWIGDPSSVPVLRKVL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHH LSGETDGPYGSAWALGVMGAKEAVPDLLLALDKGDAKLLGYALEALGSIADPSSLPKLKE HCCCCCCCCCCHHHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCCCHHHHH LLAERPKMAPQILSTVALIPSDEARLLIEEATRSKNAEVYRPAMEEIAKRKDKKSIPVLL HHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEE QFANGDDAEKRKLSYYALTAITGEKFRTAKEWNLWVKANP EECCCCCHHHHHEEEEEEEEECCHHHCCHHHCEEEEEECC >Mature Secondary Structure MHKFHTLFIFLILISFHQNCFGGPSEPETPEVLPVEEEIPTDVLLKTLDSGSNFDKGQAA CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCHHHCCHHHHHHHHCCCCCCCCCHHH IQLGNRGVTKAIPILRKMLSDKDPGLRAGAAIALGDLKDKPSSTNIANLMWTDTENPKDV EEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCHHH YLDALTRMKDTSIVGRIYPLLNDNNATLRLQTVDSLVQIGANSVGSQILAMAQKNKDREK HHHHHHHHHHHHHHHHEEEEECCCCCEEEEHHHHHHHHHCCHHHHHHHHHHHHHCCCHHH DKTFAMALGKLKVASAESYLLGLTKLQDESPTLAASYLALGRIKAKNANDVLVRALTLPY HHHHHHHHHHEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHCEECCCCCCEEEEEEECCC DKGKENASMALIEIANPKIVPQVFAVLKSDNLESKMYATDVLCAIPSKEASKLAFGLLNS CCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCCHHHHHHHHHEECCCCHHHHHHHHHHCC TDAKNWGYAAKIVGRQKYKEAKNRLEELLVKPNTPERDNFAEALGWIGDPSSVPVLRKVL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHH LSGETDGPYGSAWALGVMGAKEAVPDLLLALDKGDAKLLGYALEALGSIADPSSLPKLKE HCCCCCCCCCCHHHHHHCCCHHHHHHHHHEECCCCHHHHHHHHHHHHCCCCCCCCHHHHH LLAERPKMAPQILSTVALIPSDEARLLIEEATRSKNAEVYRPAMEEIAKRKDKKSIPVLL HHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCEEE QFANGDDAEKRKLSYYALTAITGEKFRTAKEWNLWVKANP EECCCCCHHHHHEEEEEEEEECCHHHCCHHHCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA