Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

Click here to switch to the map view.

The map label for this gene is 183219657

Identifier: 183219657

GI number: 183219657

Start: 223433

End: 223900

Strand: Reverse

Name: 183219657

Synonym: LEPBI_I0232

Alternate gene names: NA

Gene position: 223900-223433 (Counterclockwise)

Preceding gene: 183219658

Following gene: 183219652

Centisome position: 6.22

GC content: 41.03

Gene sequence:

>468_bases
ATGAAGTATTGGCTCTTTAAAACAGAACCAGATGTTTTTTCGATCGATGACCTAATCCGAGAAAAACTCTCGTATTGGGA
AGGGGTCAGAAATTACCAAGCACGTAATTACCTTCGCGATGAAGTGAAGATAGGTGATCTGGTTCTTTTTTATCATAGCC
GATTGGAACCACCAGGTGTCGTGGGCATTGCCGAAGTCGCCAAAGAAGCGAGCCCCGATCCTTATCAATTTGATCCCAAT
CATAAATACTTTGATCCAAAATTAAAAGGGCCAGAACCTCGTTGGTTTGGTGTCCATCTCAAACCTCATACAAAGTTCAA
AGAGCTGATTCCACTGGAATCCTTGAAGCAAACAAAAGGTTTGGAAAAAATGGTGGTAACACAAAAAGGATCGAGACTCT
CGATCCAACCTGTCACCAAAAAGGAATTTGAAATTGTTACAAAACTAGCAGGCGTTACAGTTAAGTAA

Upstream 100 bases:

>100_bases
TTGTCCAACCTTCTTTTGATAAATTCTCTGCTTCAAAATCAGGGATTGGATCCAAAAAAGGAAAAGGTACTTCAGCAACC
AAACCAGCTTACTCGGCTTA

Downstream 100 bases:

>100_bases
ATCGCTTATGGTTTTGCTGTAAACACCTGGACAGCTTTCACTTTGTCCACATCAAAGAATTTTTTATCCTTATAAAAGAA
TGCTCCCGCACCCATATAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKYWLFKTEPDVFSIDDLIREKLSYWEGVRNYQARNYLRDEVKIGDLVLFYHSRLEPPGVVGIAEVAKEASPDPYQFDPN
HKYFDPKLKGPEPRWFGVHLKPHTKFKELIPLESLKQTKGLEKMVVTQKGSRLSIQPVTKKEFEIVTKLAGVTVK

Sequences:

>Translated_155_residues
MKYWLFKTEPDVFSIDDLIREKLSYWEGVRNYQARNYLRDEVKIGDLVLFYHSRLEPPGVVGIAEVAKEASPDPYQFDPN
HKYFDPKLKGPEPRWFGVHLKPHTKFKELIPLESLKQTKGLEKMVVTQKGSRLSIQPVTKKEFEIVTKLAGVTVK
>Mature_155_residues
MKYWLFKTEPDVFSIDDLIREKLSYWEGVRNYQARNYLRDEVKIGDLVLFYHSRLEPPGVVGIAEVAKEASPDPYQFDPN
HKYFDPKLKGPEPRWFGVHLKPHTKFKELIPLESLKQTKGLEKMVVTQKGSRLSIQPVTKKEFEIVTKLAGVTVK

Specific function: Unknown

COG id: COG2947

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI83267861, Length=165, Percent_Identity=40, Blast_Score=115, Evalue=2e-26,
Organism=Homo sapiens, GI40806221, Length=165, Percent_Identity=40, Blast_Score=115, Evalue=2e-26,
Organism=Homo sapiens, GI7661804, Length=165, Percent_Identity=40, Blast_Score=115, Evalue=2e-26,
Organism=Homo sapiens, GI83267859, Length=104, Percent_Identity=42.3076923076923, Blast_Score=94, Evalue=5e-20,
Organism=Homo sapiens, GI40806219, Length=104, Percent_Identity=42.3076923076923, Blast_Score=94, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18047; Mature: 18047

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYWLFKTEPDVFSIDDLIREKLSYWEGVRNYQARNYLRDEVKIGDLVLFYHSRLEPPGV
CCEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCC
VGIAEVAKEASPDPYQFDPNHKYFDPKLKGPEPRWFGVHLKPHTKFKELIPLESLKQTKG
EEHHHHHHHCCCCCCEECCCCCEECCCCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHCC
LEKMVVTQKGSRLSIQPVTKKEFEIVTKLAGVTVK
HHHEEEECCCCEEEECCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKYWLFKTEPDVFSIDDLIREKLSYWEGVRNYQARNYLRDEVKIGDLVLFYHSRLEPPGV
CCEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCC
VGIAEVAKEASPDPYQFDPNHKYFDPKLKGPEPRWFGVHLKPHTKFKELIPLESLKQTKG
EEHHHHHHHCCCCCCEECCCCCEECCCCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHCC
LEKMVVTQKGSRLSIQPVTKKEFEIVTKLAGVTVK
HHHEEEECCCCEEEECCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA