| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183219657
Identifier: 183219657
GI number: 183219657
Start: 223433
End: 223900
Strand: Reverse
Name: 183219657
Synonym: LEPBI_I0232
Alternate gene names: NA
Gene position: 223900-223433 (Counterclockwise)
Preceding gene: 183219658
Following gene: 183219652
Centisome position: 6.22
GC content: 41.03
Gene sequence:
>468_bases ATGAAGTATTGGCTCTTTAAAACAGAACCAGATGTTTTTTCGATCGATGACCTAATCCGAGAAAAACTCTCGTATTGGGA AGGGGTCAGAAATTACCAAGCACGTAATTACCTTCGCGATGAAGTGAAGATAGGTGATCTGGTTCTTTTTTATCATAGCC GATTGGAACCACCAGGTGTCGTGGGCATTGCCGAAGTCGCCAAAGAAGCGAGCCCCGATCCTTATCAATTTGATCCCAAT CATAAATACTTTGATCCAAAATTAAAAGGGCCAGAACCTCGTTGGTTTGGTGTCCATCTCAAACCTCATACAAAGTTCAA AGAGCTGATTCCACTGGAATCCTTGAAGCAAACAAAAGGTTTGGAAAAAATGGTGGTAACACAAAAAGGATCGAGACTCT CGATCCAACCTGTCACCAAAAAGGAATTTGAAATTGTTACAAAACTAGCAGGCGTTACAGTTAAGTAA
Upstream 100 bases:
>100_bases TTGTCCAACCTTCTTTTGATAAATTCTCTGCTTCAAAATCAGGGATTGGATCCAAAAAAGGAAAAGGTACTTCAGCAACC AAACCAGCTTACTCGGCTTA
Downstream 100 bases:
>100_bases ATCGCTTATGGTTTTGCTGTAAACACCTGGACAGCTTTCACTTTGTCCACATCAAAGAATTTTTTATCCTTATAAAAGAA TGCTCCCGCACCCATATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MKYWLFKTEPDVFSIDDLIREKLSYWEGVRNYQARNYLRDEVKIGDLVLFYHSRLEPPGVVGIAEVAKEASPDPYQFDPN HKYFDPKLKGPEPRWFGVHLKPHTKFKELIPLESLKQTKGLEKMVVTQKGSRLSIQPVTKKEFEIVTKLAGVTVK
Sequences:
>Translated_155_residues MKYWLFKTEPDVFSIDDLIREKLSYWEGVRNYQARNYLRDEVKIGDLVLFYHSRLEPPGVVGIAEVAKEASPDPYQFDPN HKYFDPKLKGPEPRWFGVHLKPHTKFKELIPLESLKQTKGLEKMVVTQKGSRLSIQPVTKKEFEIVTKLAGVTVK >Mature_155_residues MKYWLFKTEPDVFSIDDLIREKLSYWEGVRNYQARNYLRDEVKIGDLVLFYHSRLEPPGVVGIAEVAKEASPDPYQFDPN HKYFDPKLKGPEPRWFGVHLKPHTKFKELIPLESLKQTKGLEKMVVTQKGSRLSIQPVTKKEFEIVTKLAGVTVK
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=165, Percent_Identity=40, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI40806221, Length=165, Percent_Identity=40, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI7661804, Length=165, Percent_Identity=40, Blast_Score=115, Evalue=2e-26, Organism=Homo sapiens, GI83267859, Length=104, Percent_Identity=42.3076923076923, Blast_Score=94, Evalue=5e-20, Organism=Homo sapiens, GI40806219, Length=104, Percent_Identity=42.3076923076923, Blast_Score=94, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18047; Mature: 18047
Theoretical pI: Translated: 9.80; Mature: 9.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYWLFKTEPDVFSIDDLIREKLSYWEGVRNYQARNYLRDEVKIGDLVLFYHSRLEPPGV CCEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCC VGIAEVAKEASPDPYQFDPNHKYFDPKLKGPEPRWFGVHLKPHTKFKELIPLESLKQTKG EEHHHHHHHCCCCCCEECCCCCEECCCCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHCC LEKMVVTQKGSRLSIQPVTKKEFEIVTKLAGVTVK HHHEEEECCCCEEEECCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure MKYWLFKTEPDVFSIDDLIREKLSYWEGVRNYQARNYLRDEVKIGDLVLFYHSRLEPPGV CCEEEEECCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCCCCC VGIAEVAKEASPDPYQFDPNHKYFDPKLKGPEPRWFGVHLKPHTKFKELIPLESLKQTKG EEHHHHHHHCCCCCCEECCCCCEECCCCCCCCCCEEEEEECCCCCHHHHCCHHHHHHHCC LEKMVVTQKGSRLSIQPVTKKEFEIVTKLAGVTVK HHHEEEECCCCEEEECCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA