| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is gpsA [H]
Identifier: 183219652
GI number: 183219652
Start: 217954
End: 220374
Strand: Reverse
Name: gpsA [H]
Synonym: LEPBI_I0227
Alternate gene names: 183219652
Gene position: 220374-217954 (Counterclockwise)
Preceding gene: 183219657
Following gene: 183219647
Centisome position: 6.12
GC content: 38.95
Gene sequence:
>2421_bases ATGCAAATATCTTATAACGACTTAAAACAAGCAGTTTTGGGTAGTGGCCCAATGGGGATCATTATCGCTTCCATACTGGC AGAAAAGTATGATTCCATTACTTTGTGGATTCCTGACAAAGAATTTGTCGAAGTACTCAAGAAGCGCCGCCAAACAGAAA TTATGGGAAAGACAATTGAACTTCCCGATCATATCGACATTGTTTCTAGTTTGGATTCATTTGGAAGAGATGATTGGGCT TTTCACGTGGCAGTTCCCTCTCGTTCCTTTTTGGATAGTGTCCATGGTTTAATAGAAGTCCTCGAACCATTTAACAATTA TGTTTTTTCCTTTTTAACGAAAGGGATTTTGGATTCCAAAAATCGAAAAAAATCAGGTTTTGTCACCTACTCACAATACT TACAAAATTATCTTGGTGAACGAAATTTTAATCATGCATCTGTTGCCGTTGTGAACGGTCCTTCTCTACTCGGTGAAATT TTAGAGGAAAAATTTAGTTTCTTCAATATTGGCTCAACAGAAAAAACAACGGCAGAATATCTCTCAGAGGTTTATACATC TGATTATATCAATACAACCATCACCGATGATGTGATTGGTATGGAGATTGTGGGTGTTGCCAAAAATCCCATGGCCATCG CGAGTGGAATTGTTTCCTTACTCCCTCGTTATGGTGCAAATCTATTAGGGGAAATTTTATCTGTTGGTTTTCAAGAAGTG CGAGACCTCGCAATGCGTTACGGTGCAAGACCTGACACCGTCATGGGTCGATCTGGACTTGCCGATTTCATCACAACAGC AACGAGTAACAAAAGTAGGAACCGTGGGTTTGGACAAAAGATTGTCGGCGAACTTTTGACTGGTGGGGAAAAATTAAGTT TCAAAGATCGAATCGAAATCTTTTTTGCACCAAGATCATTCATTGAAAGAGAATCGACTAAATGGCATGATAATGTGGAA GGAACGTATGCATTGAGTATCCTCATCGAACTTGCCAATGAGATTCGACTACCCTTTACCCTACATAGAACTCTGTTTGA TGTACTAACTCGGAAACAACCGCCGGGTGCACTTGTTGATCTTATCTGCGGTAAAAAAACAGAAGCTAAAAATATACCAC TTGTTGTGCAGAAAAAAGTGGGTCTCAACTTAACATCGGGAATTGATTTCCATACCCTACTTGTTGATCGTATCTTAAAA CAAATCAGTAATGTACCGGGAACAATTTCACGTGTCAAAAAACAATCTTCTGCAGTCATCGAATCCACACAAAAAAGACT GACCAAAGCCAAACGAAAAAAACAAAAGTTAGATGAAGTAAAGTTTGAATCGGAAGTCGAAATTTGGCAAAGATTTCACA ACTGCCAGAAAGACGAAGAACTTACTTTAATCAAAGAATTAGTTCGATTCTATGTAAATGAAATCGCCGACAATTATAGC CCTACTGTTCGTGAATCGGTCTTACGATTTGTAGCTCCTATCCGTTTGTTTTCTGGTGGATTTTTAAAGGGTTCCATGAT CCCGCACATTGGTGGAAAAACAGAAGTGGTCAAAGCTCTGTCTTCCAAATACAATTTATTATATGCGCCAACTCACAGAT CTCATCTTGATTCCGTTGAAGTGGCTTATTCTTTGTTCCATTTAGGTCTACCAGTCCCTCGTTATGCGGCAGGAATCAAT TTGATGTCCAATCCATTTTGGGAATGGATGTTAAAATCACTTGGTGCTTATGCTGTCGATCGAGAGAGGACAAGGAACAG TTTGTATCTTGAATGCCTCACCTTATATTCCCAAGTGATGCTCGAACAAGGAATTCCATCACTAGTGTATCCAGAAGGCA CTAGATCAAGAACTGGCGCGATTGTTCCAGTCAAAACTGGTTTACTCACAACCGCAGTGAACGCCTTCCGTAGTTCTGGT ACAGAGATTGTCATTGTTCCTATTTCTGTTTCGTACGAAACAGTTCCAGAAGACAATCAGTTTTGTAATATGCCTGAAGA ACTGGGTATGGCAGGTTTTCTTGCAAAACGATCCAATGTTTATGTTGAGTTTTGTGATCCAATTCCTATATCAGAATATG CACATACAGAAGATCCGACGATTGAACTCAGTTACCGTATCACGAAAGGTTGGAAACAATATCATAAATTGTTACCAAAC CAGATAGTAGCAAAAATTTTGGTCGAAAATGATTATTCAATCGAATTGTCACAGAGTACAATGTTAGTTGAAGATTTTAT TTCCCGCCATGAAGGGAATTACCTGACTCGTGACCCAGAAGAGATTTGGGAAAAAGGTAAAAAAATCCTAGAAAAACGCA AAATGATCGAAGAAGCCAATCGTATGATTCATTCAAAAAATGATGCGCTCATCCTCTATTACGCAAGCATGATACCAGAA GACGAAGATAAAAAGTATTAA
Upstream 100 bases:
>100_bases GACGATTTACACTCACCTGATACTTTTTCGATAGACTCAATTCGTTTCAAGCAAACAAATACAATGAGACTTTCCCGAAA TTTCTAAATGTTCATTTTTT
Downstream 100 bases:
>100_bases CGAAAGTATCTCAGATACAATCGTCCAATGAATTGATTTTGATGAAAGGGAAGGAAACAATCACTCCTTAGAATGTGAAT TATACATTCTGAATGGGCAA
Product: putative bifunctional glycerol-3-phosphate dehydrogenase/glycerol-3-phosphate acyltransferase
Products: NA
Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]
Number of amino acids: Translated: 806; Mature: 806
Protein sequence:
>806_residues MQISYNDLKQAVLGSGPMGIIIASILAEKYDSITLWIPDKEFVEVLKKRRQTEIMGKTIELPDHIDIVSSLDSFGRDDWA FHVAVPSRSFLDSVHGLIEVLEPFNNYVFSFLTKGILDSKNRKKSGFVTYSQYLQNYLGERNFNHASVAVVNGPSLLGEI LEEKFSFFNIGSTEKTTAEYLSEVYTSDYINTTITDDVIGMEIVGVAKNPMAIASGIVSLLPRYGANLLGEILSVGFQEV RDLAMRYGARPDTVMGRSGLADFITTATSNKSRNRGFGQKIVGELLTGGEKLSFKDRIEIFFAPRSFIERESTKWHDNVE GTYALSILIELANEIRLPFTLHRTLFDVLTRKQPPGALVDLICGKKTEAKNIPLVVQKKVGLNLTSGIDFHTLLVDRILK QISNVPGTISRVKKQSSAVIESTQKRLTKAKRKKQKLDEVKFESEVEIWQRFHNCQKDEELTLIKELVRFYVNEIADNYS PTVRESVLRFVAPIRLFSGGFLKGSMIPHIGGKTEVVKALSSKYNLLYAPTHRSHLDSVEVAYSLFHLGLPVPRYAAGIN LMSNPFWEWMLKSLGAYAVDRERTRNSLYLECLTLYSQVMLEQGIPSLVYPEGTRSRTGAIVPVKTGLLTTAVNAFRSSG TEIVIVPISVSYETVPEDNQFCNMPEELGMAGFLAKRSNVYVEFCDPIPISEYAHTEDPTIELSYRITKGWKQYHKLLPN QIVAKILVENDYSIELSQSTMLVEDFISRHEGNYLTRDPEEIWEKGKKILEKRKMIEEANRMIHSKNDALILYYASMIPE DEDKKY
Sequences:
>Translated_806_residues MQISYNDLKQAVLGSGPMGIIIASILAEKYDSITLWIPDKEFVEVLKKRRQTEIMGKTIELPDHIDIVSSLDSFGRDDWA FHVAVPSRSFLDSVHGLIEVLEPFNNYVFSFLTKGILDSKNRKKSGFVTYSQYLQNYLGERNFNHASVAVVNGPSLLGEI LEEKFSFFNIGSTEKTTAEYLSEVYTSDYINTTITDDVIGMEIVGVAKNPMAIASGIVSLLPRYGANLLGEILSVGFQEV RDLAMRYGARPDTVMGRSGLADFITTATSNKSRNRGFGQKIVGELLTGGEKLSFKDRIEIFFAPRSFIERESTKWHDNVE GTYALSILIELANEIRLPFTLHRTLFDVLTRKQPPGALVDLICGKKTEAKNIPLVVQKKVGLNLTSGIDFHTLLVDRILK QISNVPGTISRVKKQSSAVIESTQKRLTKAKRKKQKLDEVKFESEVEIWQRFHNCQKDEELTLIKELVRFYVNEIADNYS PTVRESVLRFVAPIRLFSGGFLKGSMIPHIGGKTEVVKALSSKYNLLYAPTHRSHLDSVEVAYSLFHLGLPVPRYAAGIN LMSNPFWEWMLKSLGAYAVDRERTRNSLYLECLTLYSQVMLEQGIPSLVYPEGTRSRTGAIVPVKTGLLTTAVNAFRSSG TEIVIVPISVSYETVPEDNQFCNMPEELGMAGFLAKRSNVYVEFCDPIPISEYAHTEDPTIELSYRITKGWKQYHKLLPN QIVAKILVENDYSIELSQSTMLVEDFISRHEGNYLTRDPEEIWEKGKKILEKRKMIEEANRMIHSKNDALILYYASMIPE DEDKKY >Mature_806_residues MQISYNDLKQAVLGSGPMGIIIASILAEKYDSITLWIPDKEFVEVLKKRRQTEIMGKTIELPDHIDIVSSLDSFGRDDWA FHVAVPSRSFLDSVHGLIEVLEPFNNYVFSFLTKGILDSKNRKKSGFVTYSQYLQNYLGERNFNHASVAVVNGPSLLGEI LEEKFSFFNIGSTEKTTAEYLSEVYTSDYINTTITDDVIGMEIVGVAKNPMAIASGIVSLLPRYGANLLGEILSVGFQEV RDLAMRYGARPDTVMGRSGLADFITTATSNKSRNRGFGQKIVGELLTGGEKLSFKDRIEIFFAPRSFIERESTKWHDNVE GTYALSILIELANEIRLPFTLHRTLFDVLTRKQPPGALVDLICGKKTEAKNIPLVVQKKVGLNLTSGIDFHTLLVDRILK QISNVPGTISRVKKQSSAVIESTQKRLTKAKRKKQKLDEVKFESEVEIWQRFHNCQKDEELTLIKELVRFYVNEIADNYS PTVRESVLRFVAPIRLFSGGFLKGSMIPHIGGKTEVVKALSSKYNLLYAPTHRSHLDSVEVAYSLFHLGLPVPRYAAGIN LMSNPFWEWMLKSLGAYAVDRERTRNSLYLECLTLYSQVMLEQGIPSLVYPEGTRSRTGAIVPVKTGLLTTAVNAFRSSG TEIVIVPISVSYETVPEDNQFCNMPEELGMAGFLAKRSNVYVEFCDPIPISEYAHTEDPTIELSYRITKGWKQYHKLLPN QIVAKILVENDYSIELSQSTMLVEDFISRHEGNYLTRDPEEIWEKGKKILEKRKMIEEANRMIHSKNDALILYYASMIPE DEDKKY
Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]
COG id: COG0240
COG function: function code C; Glycerol-3-phosphate dehydrogenase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI7657134, Length=248, Percent_Identity=27.0161290322581, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI190358539, Length=206, Percent_Identity=27.1844660194175, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1790037, Length=268, Percent_Identity=27.6119402985075, Blast_Score=100, Evalue=4e-22, Organism=Escherichia coli, GI87082362, Length=243, Percent_Identity=30.8641975308642, Blast_Score=95, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71988728, Length=202, Percent_Identity=29.2079207920792, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71988723, Length=139, Percent_Identity=33.8129496402878, Blast_Score=81, Evalue=2e-15, Organism=Caenorhabditis elegans, GI25147672, Length=191, Percent_Identity=24.6073298429319, Blast_Score=68, Evalue=2e-11, Organism=Drosophila melanogaster, GI21357731, Length=212, Percent_Identity=32.0754716981132, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI24650754, Length=212, Percent_Identity=32.0754716981132, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI24650752, Length=212, Percent_Identity=32.0754716981132, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI17864692, Length=186, Percent_Identity=30.1075268817204, Blast_Score=74, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR006168 - InterPro: IPR006109 - InterPro: IPR011128 - InterPro: IPR016040 [H]
Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]
EC number: =1.1.1.94 [H]
Molecular weight: Translated: 91117; Mature: 91117
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQISYNDLKQAVLGSGPMGIIIASILAEKYDSITLWIPDKEFVEVLKKRRQTEIMGKTIE CCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCC LPDHIDIVSSLDSFGRDDWAFHVAVPSRSFLDSVHGLIEVLEPFNNYVFSFLTKGILDSK CCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NRKKSGFVTYSQYLQNYLGERNFNHASVAVVNGPSLLGEILEEKFSFFNIGSTEKTTAEY CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHH LSEVYTSDYINTTITDDVIGMEIVGVAKNPMAIASGIVSLLPRYGANLLGEILSVGFQEV HHHHHHHHCCCCCCCCCHHCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH RDLAMRYGARPDTVMGRSGLADFITTATSNKSRNRGFGQKIVGELLTGGEKLSFKDRIEI HHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEE FFAPRSFIERESTKWHDNVEGTYALSILIELANEIRLPFTLHRTLFDVLTRKQPPGALVD EECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH LICGKKTEAKNIPLVVQKKVGLNLTSGIDFHTLLVDRILKQISNVPGTISRVKKQSSAVI HHCCCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ESTQKRLTKAKRKKQKLDEVKFESEVEIWQRFHNCQKDEELTLIKELVRFYVNEIADNYS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC PTVRESVLRFVAPIRLFSGGFLKGSMIPHIGGKTEVVKALSSKYNLLYAPTHRSHLDSVE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHH VAYSLFHLGLPVPRYAAGINLMSNPFWEWMLKSLGAYAVDRERTRNSLYLECLTLYSQVM HHHHHHHHCCCCHHHHHCCCHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LEQGIPSLVYPEGTRSRTGAIVPVKTGLLTTAVNAFRSSGTEIVIVPISVSYETVPEDNQ HHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCC FCNMPEELGMAGFLAKRSNVYVEFCDPIPISEYAHTEDPTIELSYRITKGWKQYHKLLPN CCCCHHHHCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCHH QIVAKILVENDYSIELSQSTMLVEDFISRHEGNYLTRDPEEIWEKGKKILEKRKMIEEAN HHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RMIHSKNDALILYYASMIPEDEDKKY HHHHCCCCEEEEEEHHHCCCCCCCCC >Mature Secondary Structure MQISYNDLKQAVLGSGPMGIIIASILAEKYDSITLWIPDKEFVEVLKKRRQTEIMGKTIE CCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCC LPDHIDIVSSLDSFGRDDWAFHVAVPSRSFLDSVHGLIEVLEPFNNYVFSFLTKGILDSK CCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NRKKSGFVTYSQYLQNYLGERNFNHASVAVVNGPSLLGEILEEKFSFFNIGSTEKTTAEY CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHH LSEVYTSDYINTTITDDVIGMEIVGVAKNPMAIASGIVSLLPRYGANLLGEILSVGFQEV HHHHHHHHCCCCCCCCCHHCEEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH RDLAMRYGARPDTVMGRSGLADFITTATSNKSRNRGFGQKIVGELLTGGEKLSFKDRIEI HHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCEEE FFAPRSFIERESTKWHDNVEGTYALSILIELANEIRLPFTLHRTLFDVLTRKQPPGALVD EECCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHH LICGKKTEAKNIPLVVQKKVGLNLTSGIDFHTLLVDRILKQISNVPGTISRVKKQSSAVI HHCCCCCCCCCCCEEEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ESTQKRLTKAKRKKQKLDEVKFESEVEIWQRFHNCQKDEELTLIKELVRFYVNEIADNYS HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC PTVRESVLRFVAPIRLFSGGFLKGSMIPHIGGKTEVVKALSSKYNLLYAPTHRSHLDSVE HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEECCCCHHHHHHHH VAYSLFHLGLPVPRYAAGINLMSNPFWEWMLKSLGAYAVDRERTRNSLYLECLTLYSQVM HHHHHHHHCCCCHHHHHCCCHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH LEQGIPSLVYPEGTRSRTGAIVPVKTGLLTTAVNAFRSSGTEIVIVPISVSYETVPEDNQ HHCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCC FCNMPEELGMAGFLAKRSNVYVEFCDPIPISEYAHTEDPTIELSYRITKGWKQYHKLLPN CCCCHHHHCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHCHH QIVAKILVENDYSIELSQSTMLVEDFISRHEGNYLTRDPEEIWEKGKKILEKRKMIEEAN HHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RMIHSKNDALILYYASMIPEDEDKKY HHHHCCCCEEEEEEHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA