| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is manX [H]
Identifier: 18311614
GI number: 18311614
Start: 3005839
End: 3006327
Strand: Reverse
Name: manX [H]
Synonym: CPE2632
Alternate gene names: 18311614
Gene position: 3006327-3005839 (Counterclockwise)
Preceding gene: 18311615
Following gene: 18311613
Centisome position: 99.17
GC content: 32.52
Gene sequence:
>489_bases ATGCCAATAGTACATTTCAGAGTTGACGGAAGACTTATTCATGGACAAGTAGCCTTGGCTTGGTCTAAAATGACAAATCC AAATCATATTATAGTTGCCAATGATATGGTTGCTAGTGATCCAAATCAACAAGCAATACTAAAATTAGCTGCTCCAAAGC AAGTAAGAATATCAATGCAGCCAGTTGATAAGGTTATTGCATACTTAAATAGAGGACTAGCTCCAAATGAGAGAGTTTTT CTATTAGTTAAGGATGTGGTAGATGCTAATAGGATTTATGAGGGTGGATTTAAATATATGGACCTTAATATAGGCAATAT GACTCATAAACCAAATGCTAAAAAATTAAGTGAAAAACTATTTGTTACAGAAAAAGAGTTTGAAGCATTAAAAAGTTTGC TAGATAAAAATGTTAATTGCTACTTCCAAATGATTCCGACAGACTCAAAGCAAGATATTAGACCGTTAGTAGAGGTTTTT AAAAGTTAA
Upstream 100 bases:
>100_bases TCGTTTAAAATAATAATTTAATTATAAAATTATTATAAAGATGTATTACTAGATTTTTAGAGTCATATAATAGTACAAAC AATATTAAGGAGGATTTAAA
Downstream 100 bases:
>100_bases TTATTTTAAGGGGATTATACAATTTAATAATTAGGGGGATATGTTTATGCAAGAAATAGGAATTATACAAATTTTACTAC TCTCTGTATGGGCTTTCCTA
Product: PTS system protein
Products: NA
Alternate protein names: EIIAB-Man; Mannose-specific phosphotransferase enzyme IIA component; EIII-Man; PTS system mannose-specific EIIA component; Mannose-specific phosphotransferase enzyme IIB component; PTS system mannose-specific EIIB component [H]
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPIVHFRVDGRLIHGQVALAWSKMTNPNHIIVANDMVASDPNQQAILKLAAPKQVRISMQPVDKVIAYLNRGLAPNERVF LLVKDVVDANRIYEGGFKYMDLNIGNMTHKPNAKKLSEKLFVTEKEFEALKSLLDKNVNCYFQMIPTDSKQDIRPLVEVF KS
Sequences:
>Translated_162_residues MPIVHFRVDGRLIHGQVALAWSKMTNPNHIIVANDMVASDPNQQAILKLAAPKQVRISMQPVDKVIAYLNRGLAPNERVF LLVKDVVDANRIYEGGFKYMDLNIGNMTHKPNAKKLSEKLFVTEKEFEALKSLLDKNVNCYFQMIPTDSKQDIRPLVEVF KS >Mature_161_residues PIVHFRVDGRLIHGQVALAWSKMTNPNHIIVANDMVASDPNQQAILKLAAPKQVRISMQPVDKVIAYLNRGLAPNERVFL LVKDVVDANRIYEGGFKYMDLNIGNMTHKPNAKKLSEKLFVTEKEFEALKSLLDKNVNCYFQMIPTDSKQDIRPLVEVFK S
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG3444
COG function: function code G; Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-4 domain [H]
Homologues:
Organism=Escherichia coli, GI1788120, Length=157, Percent_Identity=35.6687898089172, Blast_Score=96, Evalue=1e-21, Organism=Escherichia coli, GI87082217, Length=162, Percent_Identity=31.4814814814815, Blast_Score=89, Evalue=1e-19, Organism=Escherichia coli, GI1789527, Length=148, Percent_Identity=30.4054054054054, Blast_Score=80, Evalue=7e-17,
Paralogues:
None
Copy number: 220 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2880 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 260 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004701 - InterPro: IPR013789 - InterPro: IPR004720 - InterPro: IPR018455 [H]
Pfam domain/function: PF03610 EIIA-man; PF03830 PTSIIB_sorb [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 18406; Mature: 18275
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS51101 PTS_EIIB_TYPE_4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIVHFRVDGRLIHGQVALAWSKMTNPNHIIVANDMVASDPNQQAILKLAAPKQVRISMQ CCEEEEEECCEEEECEEEEEEECCCCCCEEEEECCEECCCCCHHEEEEECCCCEEEEEEC PVDKVIAYLNRGLAPNERVFLLVKDVVDANRIYEGGFKYMDLNIGNMTHKPNAKKLSEKL CHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHH FVTEKEFEALKSLLDKNVNCYFQMIPTDSKQDIRPLVEVFKS CCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCC >Mature Secondary Structure PIVHFRVDGRLIHGQVALAWSKMTNPNHIIVANDMVASDPNQQAILKLAAPKQVRISMQ CEEEEEECCEEEECEEEEEEECCCCCCEEEEECCEECCCCCHHEEEEECCCCEEEEEEC PVDKVIAYLNRGLAPNERVFLLVKDVVDANRIYEGGFKYMDLNIGNMTHKPNAKKLSEKL CHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHH FVTEKEFEALKSLLDKNVNCYFQMIPTDSKQDIRPLVEVFKS CCCHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]