| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311583
Identifier: 18311583
GI number: 18311583
Start: 2978953
End: 2979324
Strand: Reverse
Name: 18311583
Synonym: CPE2601
Alternate gene names: NA
Gene position: 2979324-2978953 (Counterclockwise)
Preceding gene: 18311584
Following gene: 18311582
Centisome position: 98.28
GC content: 29.84
Gene sequence:
>372_bases ATGTCAAAAGAATTAATTATAGCAATAATATTTATGAATTTAGCACTATTATTTTATAGTATAGGTGTTTGGTCTGAAAA GATTCAAAAAACTTTAAAACCATGGCACTTAGCATTTTTCTACTTAGGTCTAATTTGTGATACTACAGGAACTGGAGCTA TGGAAAAGATAGCTGGGGGAATAAACTTTAGTTTCCACACAATAACAGGTGGAGCAGCATTAATATTAATGTTAGTACAT GCTATCTGGGCAACTGTAGTTTTAGTAAAGAAAGATAAAAATATGATAGCTAAATTTCACAAATTTAGTATAATTGTTTG GGTAATTTGGTTAATACCATTCTTTACAGGAGCTGCAATGCATATGCTATAA
Upstream 100 bases:
>100_bases TAAAGTCTTTTTATTAAGAAATTAATATTACTAAATTGTAAGTAGAATACAATGGTATTATAATATGAACATGGTTCAAA TAAAAAAGGAGATGAAAGTA
Downstream 100 bases:
>100_bases AAGTTTAAAAGACTATGTAAGAATTATATCTTGCATAGTCTTTTTTATATATAAAAATTAATATTTTAGTTTTAAAATAT TATGGTATTTTAAAATGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 122
Protein sequence:
>123_residues MSKELIIAIIFMNLALLFYSIGVWSEKIQKTLKPWHLAFFYLGLICDTTGTGAMEKIAGGINFSFHTITGGAALILMLVH AIWATVVLVKKDKNMIAKFHKFSIIVWVIWLIPFFTGAAMHML
Sequences:
>Translated_123_residues MSKELIIAIIFMNLALLFYSIGVWSEKIQKTLKPWHLAFFYLGLICDTTGTGAMEKIAGGINFSFHTITGGAALILMLVH AIWATVVLVKKDKNMIAKFHKFSIIVWVIWLIPFFTGAAMHML >Mature_122_residues SKELIIAIIFMNLALLFYSIGVWSEKIQKTLKPWHLAFFYLGLICDTTGTGAMEKIAGGINFSFHTITGGAALILMLVHA IWATVVLVKKDKNMIAKFHKFSIIVWVIWLIPFFTGAAMHML
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13831; Mature: 13700
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKELIIAIIFMNLALLFYSIGVWSEKIQKTLKPWHLAFFYLGLICDTTGTGAMEKIAGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC INFSFHTITGGAALILMLVHAIWATVVLVKKDKNMIAKFHKFSIIVWVIWLIPFFTGAAM CCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HML HCC >Mature Secondary Structure SKELIIAIIFMNLALLFYSIGVWSEKIQKTLKPWHLAFFYLGLICDTTGTGAMEKIAGG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC INFSFHTITGGAALILMLVHAIWATVVLVKKDKNMIAKFHKFSIIVWVIWLIPFFTGAAM CCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH HML HCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA