| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311584
Identifier: 18311584
GI number: 18311584
Start: 2979554
End: 2980195
Strand: Reverse
Name: 18311584
Synonym: CPE2602
Alternate gene names: NA
Gene position: 2980195-2979554 (Counterclockwise)
Preceding gene: 18311585
Following gene: 18311583
Centisome position: 98.31
GC content: 29.13
Gene sequence:
>642_bases ATGGATAAGAATGTTATGTGGTTAAGAGAATGTAGAATTAATAAAGTTATAAAAGCTTTAGAAGAAAATAATATGAATGG ATATTTAGTAAATTCAAAAGAAGAACTTATAAGTAAGATAGAAGAATTAACTAATAGTGGAGATATAGTAGCGTGCGGAG GCTCTATGTCTTTATTTGAAGCTGGAGTTATAGATCATCTTAGAAGTGGAAGATATGAATTTTTAGATAGATATAAAGAG GGGTTAAAACCTGAAGATATAAAAAAGATATACAGAGATGCTTTTTCATCAGATGTATATTTCACAAGTACAAATGCAAT TACTGAAGAGGGTGAAATATATAATGTTGATGGTAATGGAAACAGAGTAGCAGCAATGCTTTATGGACCAGATAAGGTCA TAATTGTAGCAGGATATAATAAAATTGTTGAAAATTTAAGTGAGGCTATACAAAGAAATAGAAGGATTTCAGCTCCTGCT AATGCAAAAAGATTAAATAAGAAAACACCTTGTGCTAAGGTGGGAAATTGCATGGATTGTAAGAGTCCAGAAAAGATATG TAGAGAATATACTTTAATCAGAAGTCAAAGTAATTCAAATAGAATACATGTAATATTCTTAAATGAAGAATTAGGATATT AA
Upstream 100 bases:
>100_bases TTTTGAATAGGTAGACTTAGTCTACCTATTTTTTATGTGCTTTTTTAAGATTTTAATATGATATAATTTAAGTATTAATT ATTTTGGGGGAGTTTATATT
Downstream 100 bases:
>100_bases AATTTACAAGTAAGGACATGTAAAAATGTTCTTACTTTTTTTATAAATCTGAATTTGATAAAGAATGATAATTTGTAAAT AATTATTATTAAATGTATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MDKNVMWLRECRINKVIKALEENNMNGYLVNSKEELISKIEELTNSGDIVACGGSMSLFEAGVIDHLRSGRYEFLDRYKE GLKPEDIKKIYRDAFSSDVYFTSTNAITEEGEIYNVDGNGNRVAAMLYGPDKVIIVAGYNKIVENLSEAIQRNRRISAPA NAKRLNKKTPCAKVGNCMDCKSPEKICREYTLIRSQSNSNRIHVIFLNEELGY
Sequences:
>Translated_213_residues MDKNVMWLRECRINKVIKALEENNMNGYLVNSKEELISKIEELTNSGDIVACGGSMSLFEAGVIDHLRSGRYEFLDRYKE GLKPEDIKKIYRDAFSSDVYFTSTNAITEEGEIYNVDGNGNRVAAMLYGPDKVIIVAGYNKIVENLSEAIQRNRRISAPA NAKRLNKKTPCAKVGNCMDCKSPEKICREYTLIRSQSNSNRIHVIFLNEELGY >Mature_213_residues MDKNVMWLRECRINKVIKALEENNMNGYLVNSKEELISKIEELTNSGDIVACGGSMSLFEAGVIDHLRSGRYEFLDRYKE GLKPEDIKKIYRDAFSSDVYFTSTNAITEEGEIYNVDGNGNRVAAMLYGPDKVIIVAGYNKIVENLSEAIQRNRRISAPA NAKRLNKKTPCAKVGNCMDCKSPEKICREYTLIRSQSNSNRIHVIFLNEELGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24147; Mature: 24147
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKNVMWLRECRINKVIKALEENNMNGYLVNSKEELISKIEELTNSGDIVACGGSMSLFE CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCEEEECCCHHHHH AGVIDHLRSGRYEFLDRYKEGLKPEDIKKIYRDAFSSDVYFTSTNAITEEGEIYNVDGNG HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCC NRVAAMLYGPDKVIIVAGYNKIVENLSEAIQRNRRISAPANAKRLNKKTPCAKVGNCMDC CEEEEEEECCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHCCCCCCC KSPEKICREYTLIRSQSNSNRIHVIFLNEELGY CCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MDKNVMWLRECRINKVIKALEENNMNGYLVNSKEELISKIEELTNSGDIVACGGSMSLFE CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCEEEECCCHHHHH AGVIDHLRSGRYEFLDRYKEGLKPEDIKKIYRDAFSSDVYFTSTNAITEEGEIYNVDGNG HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCC NRVAAMLYGPDKVIIVAGYNKIVENLSEAIQRNRRISAPANAKRLNKKTPCAKVGNCMDC CEEEEEEECCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHCCCCCCC KSPEKICREYTLIRSQSNSNRIHVIFLNEELGY CCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA