Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311584

Identifier: 18311584

GI number: 18311584

Start: 2979554

End: 2980195

Strand: Reverse

Name: 18311584

Synonym: CPE2602

Alternate gene names: NA

Gene position: 2980195-2979554 (Counterclockwise)

Preceding gene: 18311585

Following gene: 18311583

Centisome position: 98.31

GC content: 29.13

Gene sequence:

>642_bases
ATGGATAAGAATGTTATGTGGTTAAGAGAATGTAGAATTAATAAAGTTATAAAAGCTTTAGAAGAAAATAATATGAATGG
ATATTTAGTAAATTCAAAAGAAGAACTTATAAGTAAGATAGAAGAATTAACTAATAGTGGAGATATAGTAGCGTGCGGAG
GCTCTATGTCTTTATTTGAAGCTGGAGTTATAGATCATCTTAGAAGTGGAAGATATGAATTTTTAGATAGATATAAAGAG
GGGTTAAAACCTGAAGATATAAAAAAGATATACAGAGATGCTTTTTCATCAGATGTATATTTCACAAGTACAAATGCAAT
TACTGAAGAGGGTGAAATATATAATGTTGATGGTAATGGAAACAGAGTAGCAGCAATGCTTTATGGACCAGATAAGGTCA
TAATTGTAGCAGGATATAATAAAATTGTTGAAAATTTAAGTGAGGCTATACAAAGAAATAGAAGGATTTCAGCTCCTGCT
AATGCAAAAAGATTAAATAAGAAAACACCTTGTGCTAAGGTGGGAAATTGCATGGATTGTAAGAGTCCAGAAAAGATATG
TAGAGAATATACTTTAATCAGAAGTCAAAGTAATTCAAATAGAATACATGTAATATTCTTAAATGAAGAATTAGGATATT
AA

Upstream 100 bases:

>100_bases
TTTTGAATAGGTAGACTTAGTCTACCTATTTTTTATGTGCTTTTTTAAGATTTTAATATGATATAATTTAAGTATTAATT
ATTTTGGGGGAGTTTATATT

Downstream 100 bases:

>100_bases
AATTTACAAGTAAGGACATGTAAAAATGTTCTTACTTTTTTTATAAATCTGAATTTGATAAAGAATGATAATTTGTAAAT
AATTATTATTAAATGTATTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MDKNVMWLRECRINKVIKALEENNMNGYLVNSKEELISKIEELTNSGDIVACGGSMSLFEAGVIDHLRSGRYEFLDRYKE
GLKPEDIKKIYRDAFSSDVYFTSTNAITEEGEIYNVDGNGNRVAAMLYGPDKVIIVAGYNKIVENLSEAIQRNRRISAPA
NAKRLNKKTPCAKVGNCMDCKSPEKICREYTLIRSQSNSNRIHVIFLNEELGY

Sequences:

>Translated_213_residues
MDKNVMWLRECRINKVIKALEENNMNGYLVNSKEELISKIEELTNSGDIVACGGSMSLFEAGVIDHLRSGRYEFLDRYKE
GLKPEDIKKIYRDAFSSDVYFTSTNAITEEGEIYNVDGNGNRVAAMLYGPDKVIIVAGYNKIVENLSEAIQRNRRISAPA
NAKRLNKKTPCAKVGNCMDCKSPEKICREYTLIRSQSNSNRIHVIFLNEELGY
>Mature_213_residues
MDKNVMWLRECRINKVIKALEENNMNGYLVNSKEELISKIEELTNSGDIVACGGSMSLFEAGVIDHLRSGRYEFLDRYKE
GLKPEDIKKIYRDAFSSDVYFTSTNAITEEGEIYNVDGNGNRVAAMLYGPDKVIIVAGYNKIVENLSEAIQRNRRISAPA
NAKRLNKKTPCAKVGNCMDCKSPEKICREYTLIRSQSNSNRIHVIFLNEELGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24147; Mature: 24147

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKNVMWLRECRINKVIKALEENNMNGYLVNSKEELISKIEELTNSGDIVACGGSMSLFE
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCEEEECCCHHHHH
AGVIDHLRSGRYEFLDRYKEGLKPEDIKKIYRDAFSSDVYFTSTNAITEEGEIYNVDGNG
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCC
NRVAAMLYGPDKVIIVAGYNKIVENLSEAIQRNRRISAPANAKRLNKKTPCAKVGNCMDC
CEEEEEEECCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHCCCCCCC
KSPEKICREYTLIRSQSNSNRIHVIFLNEELGY
CCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MDKNVMWLRECRINKVIKALEENNMNGYLVNSKEELISKIEELTNSGDIVACGGSMSLFE
CCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCCCCEEEECCCHHHHH
AGVIDHLRSGRYEFLDRYKEGLKPEDIKKIYRDAFSSDVYFTSTNAITEEGEIYNVDGNG
HHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCC
NRVAAMLYGPDKVIIVAGYNKIVENLSEAIQRNRRISAPANAKRLNKKTPCAKVGNCMDC
CEEEEEEECCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHCCCCCCC
KSPEKICREYTLIRSQSNSNRIHVIFLNEELGY
CCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA