| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311581
Identifier: 18311581
GI number: 18311581
Start: 2977704
End: 2977856
Strand: Reverse
Name: 18311581
Synonym: CPE2599
Alternate gene names: NA
Gene position: 2977856-2977704 (Counterclockwise)
Preceding gene: 18311582
Following gene: 18311578
Centisome position: 98.23
GC content: 31.37
Gene sequence:
>153_bases ATGTCAGATAAAACATTAAAATGCAGAGATTGCGGAAGTGAATTCATATTTTCAGTAGGAGAGCAAGAATTCTACAAAGA AAAAGGATTTGAAAATGAGCCAACAAGATGTATAGCTTGTAGAAGAGCTAAAAAAGAGCAAAATAGAAGATAA
Upstream 100 bases:
>100_bases TAGCAGAGTAGCTAACAAAAAAAGTTTCATTTAGATAAATAGTTCTCAAAATTAGAGATTATATATCCATTTAGAATCTT TAATTTTAGGAGGAATGTTT
Downstream 100 bases:
>100_bases TTTTAGAGTGTTATAGGTTGTAGTTTAAACTACAACCTTTTTTATGTAAAAAAATATTATAAAAACCTTACTTAATACTA ATACAGAGAATCGCATAATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 50; Mature: 49
Protein sequence:
>50_residues MSDKTLKCRDCGSEFIFSVGEQEFYKEKGFENEPTRCIACRRAKKEQNRR
Sequences:
>Translated_50_residues MSDKTLKCRDCGSEFIFSVGEQEFYKEKGFENEPTRCIACRRAKKEQNRR >Mature_49_residues SDKTLKCRDCGSEFIFSVGEQEFYKEKGFENEPTRCIACRRAKKEQNRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5951; Mature: 5820
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 10.0 %Cys+Met (Translated Protein) 8.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 8.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKTLKCRDCGSEFIFSVGEQEFYKEKGFENEPTRCIACRRAKKEQNRR CCCCCCCHHHCCHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure SDKTLKCRDCGSEFIFSVGEQEFYKEKGFENEPTRCIACRRAKKEQNRR CCCCCCHHHCCHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA