| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311578
Identifier: 18311578
GI number: 18311578
Start: 2975166
End: 2975534
Strand: Reverse
Name: 18311578
Synonym: CPE2596
Alternate gene names: NA
Gene position: 2975534-2975166 (Counterclockwise)
Preceding gene: 18311581
Following gene: 18311577
Centisome position: 98.16
GC content: 29.27
Gene sequence:
>369_bases ATGGGAAATGAAAGTTATAGAAAACAAAATAGTGATGGTAGCATATTAAAGTGGATAGGAAGATTTGTTTTAGTTGCCAT AGTATTAGTAATAACATCATTTGTAACTCCAGGATTTTCAATACATGGACTATGGTCATTTTTATTAGCTGCTGTCGTAA TATCAGTGTTAGATTATTTAGTAGAATTATTTATGGGTGTTGATGCATCACCATTTGGGAAAGGAATAAAAGGTTTTATA ATAGCTGCAATAATAATATATTTAACTCAATTCTTAGTTCCAAACATGGGAGTTTCAATTATAGGAGCATTACTAGCTGC TGTAGTTATAGGAATAATAGATGCTGTAATTCCAAATAAAATTATGTAA
Upstream 100 bases:
>100_bases TATTTCATATAGTGGTCAACATATAAGTGTAAAGAAAGCTATTAATATTAAAAATGAGTAGCACTTTACAAAGGATCAAT TTATAAAAGGAGGTAATCTT
Downstream 100 bases:
>100_bases AATTAAATTTAAATATTTTAATTAATAAAAACTGCTATTAATTTAATTAATAGCAGTTTTTATTATGATTTTTTGAATTA CACCAATAAATTTTTGTAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 121
Protein sequence:
>122_residues MGNESYRKQNSDGSILKWIGRFVLVAIVLVITSFVTPGFSIHGLWSFLLAAVVISVLDYLVELFMGVDASPFGKGIKGFI IAAIIIYLTQFLVPNMGVSIIGALLAAVVIGIIDAVIPNKIM
Sequences:
>Translated_122_residues MGNESYRKQNSDGSILKWIGRFVLVAIVLVITSFVTPGFSIHGLWSFLLAAVVISVLDYLVELFMGVDASPFGKGIKGFI IAAIIIYLTQFLVPNMGVSIIGALLAAVVIGIIDAVIPNKIM >Mature_121_residues GNESYRKQNSDGSILKWIGRFVLVAIVLVITSFVTPGFSIHGLWSFLLAAVVISVLDYLVELFMGVDASPFGKGIKGFII AAIIIYLTQFLVPNMGVSIIGALLAAVVIGIIDAVIPNKIM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13083; Mature: 12952
Theoretical pI: Translated: 8.99; Mature: 8.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNESYRKQNSDGSILKWIGRFVLVAIVLVITSFVTPGFSIHGLWSFLLAAVVISVLDYL CCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VELFMGVDASPFGKGIKGFIIAAIIIYLTQFLVPNMGVSIIGALLAAVVIGIIDAVIPNK HHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC IM CC >Mature Secondary Structure GNESYRKQNSDGSILKWIGRFVLVAIVLVITSFVTPGFSIHGLWSFLLAAVVISVLDYL CCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VELFMGVDASPFGKGIKGFIIAAIIIYLTQFLVPNMGVSIIGALLAAVVIGIIDAVIPNK HHHHHCCCCCCHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCC IM CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA