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The map label for this gene is 18311528

Identifier: 18311528

GI number: 18311528

Start: 2916487

End: 2917152

Strand: Reverse

Name: 18311528

Synonym: CPE2546

Alternate gene names: NA

Gene position: 2917152-2916487 (Counterclockwise)

Preceding gene: 18311529

Following gene: 18311527

Centisome position: 96.23

GC content: 28.68

Gene sequence:

>666_bases
ATGAGATTTACAGAAAAATTATTAAAAGAAGCAATGCCTATATGGGAGAAGTATTTAGATCACCCATTTATAAAGGAAAT
TGGAGAAGGAACTCTAGATAAGAATAAATTTAAAGAATATTTAGTTCAGGATTACCTTTATTTAAAAGAGTATGCTAAAG
TTTTTTGTGCTGGAGTAGTTAAAGCTAAAACTATGGAAGAAATGAAATTCTTTTATAATTCAACAAAGGGAACTATGGAG
GATGAAACAGCAGTACATATAGAATATTTAAAAGAATTTGGTATATCAGAATTAGATGCAGAGAAAAGAGAATATAAGAG
TACTACTATAAGTTATACAAGCTATATGCAAGCAATAGCATTAACAGGAGATTTAGATGAGATTGCCATTGCAACCTTAC
CATGTACATGGAGTTATAGCTACATAGGAAAATATATTTCAAAAAAATACTCTGACAAATTACAGGGAAATTTCTTTAAA
CCTTGGATTGATGAATATGCTTCTGATGGGTTTGCTAAATTTACAGATGAGTGGTTAGTTTATGTAGACAAAAAATGTTC
AAACTTATCTGAAGAAAAACAAAAAAGATTAATAGATATATTTAAAAGAGCTAGTTTGTACGAACTTGATTTTTGGAATA
TGGCGTATGATGAAGGTGAAAAATAA

Upstream 100 bases:

>100_bases
AAAAAGTGTATGAAATTTTTAGTTAGAGTTTTATAAAACTTTGAGGTAATTCTTATTTGGGCTATTAGGTTTAATCATAA
GATTAAAGGAGATATAGAAT

Downstream 100 bases:

>100_bases
TGAGTGTTTATTTAGTAGCTTTAATTGGAATTTTAATATTAGGTTTATACATATTAGATTTAAGAAAACATAAAATTACA
ACAAGAGAAATTATCATGAT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MRFTEKLLKEAMPIWEKYLDHPFIKEIGEGTLDKNKFKEYLVQDYLYLKEYAKVFCAGVVKAKTMEEMKFFYNSTKGTME
DETAVHIEYLKEFGISELDAEKREYKSTTISYTSYMQAIALTGDLDEIAIATLPCTWSYSYIGKYISKKYSDKLQGNFFK
PWIDEYASDGFAKFTDEWLVYVDKKCSNLSEEKQKRLIDIFKRASLYELDFWNMAYDEGEK

Sequences:

>Translated_221_residues
MRFTEKLLKEAMPIWEKYLDHPFIKEIGEGTLDKNKFKEYLVQDYLYLKEYAKVFCAGVVKAKTMEEMKFFYNSTKGTME
DETAVHIEYLKEFGISELDAEKREYKSTTISYTSYMQAIALTGDLDEIAIATLPCTWSYSYIGKYISKKYSDKLQGNFFK
PWIDEYASDGFAKFTDEWLVYVDKKCSNLSEEKQKRLIDIFKRASLYELDFWNMAYDEGEK
>Mature_221_residues
MRFTEKLLKEAMPIWEKYLDHPFIKEIGEGTLDKNKFKEYLVQDYLYLKEYAKVFCAGVVKAKTMEEMKFFYNSTKGTME
DETAVHIEYLKEFGISELDAEKREYKSTTISYTSYMQAIALTGDLDEIAIATLPCTWSYSYIGKYISKKYSDKLQGNFFK
PWIDEYASDGFAKFTDEWLVYVDKKCSNLSEEKQKRLIDIFKRASLYELDFWNMAYDEGEK

Specific function: Unknown

COG id: COG0819

COG function: function code K; Putative transcription activator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thiaminase-2 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6324517, Length=207, Percent_Identity=26.5700483091787, Blast_Score=88, Evalue=9e-19,
Organism=Saccharomyces cerevisiae, GI6325378, Length=210, Percent_Identity=26.6666666666667, Blast_Score=88, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6324997, Length=210, Percent_Identity=24.7619047619048, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016084
- InterPro:   IPR004305 [H]

Pfam domain/function: PF03070 TENA_THI-4 [H]

EC number: NA

Molecular weight: Translated: 26139; Mature: 26139

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTEKLLKEAMPIWEKYLDHPFIKEIGEGTLDKNKFKEYLVQDYLYLKEYAKVFCAGVV
CCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAKTMEEMKFFYNSTKGTMEDETAVHIEYLKEFGISELDAEKREYKSTTISYTSYMQAIA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LTGDLDEIAIATLPCTWSYSYIGKYISKKYSDKLQGNFFKPWIDEYASDGFAKFTDEWLV
HCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHH
YVDKKCSNLSEEKQKRLIDIFKRASLYELDFWNMAYDEGEK
HHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCHHCCCCCCCC
>Mature Secondary Structure
MRFTEKLLKEAMPIWEKYLDHPFIKEIGEGTLDKNKFKEYLVQDYLYLKEYAKVFCAGVV
CCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAKTMEEMKFFYNSTKGTMEDETAVHIEYLKEFGISELDAEKREYKSTTISYTSYMQAIA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LTGDLDEIAIATLPCTWSYSYIGKYISKKYSDKLQGNFFKPWIDEYASDGFAKFTDEWLV
HCCCHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHH
YVDKKCSNLSEEKQKRLIDIFKRASLYELDFWNMAYDEGEK
HHHHHHCCCHHHHHHHHHHHHHHCCHHCCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]