| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is lgt2
Identifier: 18311496
GI number: 18311496
Start: 2878466
End: 2879236
Strand: Reverse
Name: lgt2
Synonym: CPE2514
Alternate gene names: 18311496
Gene position: 2879236-2878466 (Counterclockwise)
Preceding gene: 18311497
Following gene: 18311495
Centisome position: 94.98
GC content: 31.52
Gene sequence:
>771_bases ATGAGGATTGTTTTAGGGGAAATCTTTGGACTTAAGATTTATAGCTATGGATTTATGATAGGATTAGGTATAATCTGTGC AACATTATTATTCTTAAAGCGAGGAACTCAAAGAGGCTATAACGAAGATAAGCTTTTTAATGCTACTATCTTAACTGTTA TTTCAGGGATTTTAGGAGGAAAAATACTCTATATAATAACTGAGTGGAAAACAGTTATGCAAGATCCAAGTTTAATATTT AGAGATTTTGGAAATGGCTTTGTAATTTATGGAGCCATAATAGGAGGAGCCTTAGGAATCGCTCTATGCTCTTTAAAGAA TAAGTGGAATGTATTAGAGCTTGCAGATTTAGTAGTGCCAGGTTTAGCCTTAGCTCAAGGATTTGGAAGAATAGGATGTT TACTTGCAGGATGTTGTTATGGGGCTGAAACTACAAGTTCTATAGGAATTATATTTCCAGCTGATTCATTAGCTCCAGCC GGGGTACCATTATATCCAACACAAATCTTTTCGTCAATTTTTGATTTTGCCTTAGGTTTATTTTTACTATGGTATGGAAA TAAAAACAAAGAAAAAGGAAAAACTATGAGCATGTATATGATAATATACAGTATAGGCAGATTCTTTGTAGAGTTTTTAA GAAATGATCCTAGAGGTAGCGTAGGATTATTATCAACATCTCAATTTATATCAATATTTATATTAATAGGGGGTATATTA CTATATAATATAAATAAATTAAAAGGGAGAAAAGAAACAGGTGAAAAATAA
Upstream 100 bases:
>100_bases AATTTGATTTGCTTTAGTAGAAGTATTATAATTAAATTTAAAAGAGAAGCATAATAATATGCTTCTCTTTTAAATTTACA AATAAATATTGGAGGAGTTT
Downstream 100 bases:
>100_bases GAAATTAATTCTAGTAATACTTTGCTTAGTTTTAGGATTAGGCATTGCTGGATGTTCAGCTAAAGATATAAGCTCAAAAT TTGTTGGGAGTAATAATAAT
Product: prolipoprotein diacylglyceryl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MRIVLGEIFGLKIYSYGFMIGLGIICATLLFLKRGTQRGYNEDKLFNATILTVISGILGGKILYIITEWKTVMQDPSLIF RDFGNGFVIYGAIIGGALGIALCSLKNKWNVLELADLVVPGLALAQGFGRIGCLLAGCCYGAETTSSIGIIFPADSLAPA GVPLYPTQIFSSIFDFALGLFLLWYGNKNKEKGKTMSMYMIIYSIGRFFVEFLRNDPRGSVGLLSTSQFISIFILIGGIL LYNINKLKGRKETGEK
Sequences:
>Translated_256_residues MRIVLGEIFGLKIYSYGFMIGLGIICATLLFLKRGTQRGYNEDKLFNATILTVISGILGGKILYIITEWKTVMQDPSLIF RDFGNGFVIYGAIIGGALGIALCSLKNKWNVLELADLVVPGLALAQGFGRIGCLLAGCCYGAETTSSIGIIFPADSLAPA GVPLYPTQIFSSIFDFALGLFLLWYGNKNKEKGKTMSMYMIIYSIGRFFVEFLRNDPRGSVGLLSTSQFISIFILIGGIL LYNINKLKGRKETGEK >Mature_256_residues MRIVLGEIFGLKIYSYGFMIGLGIICATLLFLKRGTQRGYNEDKLFNATILTVISGILGGKILYIITEWKTVMQDPSLIF RDFGNGFVIYGAIIGGALGIALCSLKNKWNVLELADLVVPGLALAQGFGRIGCLLAGCCYGAETTSSIGIIFPADSLAPA GVPLYPTQIFSSIFDFALGLFLLWYGNKNKEKGKTMSMYMIIYSIGRFFVEFLRNDPRGSVGLLSTSQFISIFILIGGIL LYNINKLKGRKETGEK
Specific function: Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
COG id: COG0682
COG function: function code M; Prolipoprotein diacylglyceryltransferase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable)
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lgt family
Homologues:
Organism=Escherichia coli, GI1789192, Length=257, Percent_Identity=22.1789883268482, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LGT2_CLOPE (Q8XHH1)
Other databases:
- EMBL: BA000016 - RefSeq: NP_563430.1 - GeneID: 990892 - GenomeReviews: BA000016_GR - KEGG: cpe:CPE2514 - NMPDR: fig|195102.1.peg.2577 - HOGENOM: HBG450278 - OMA: CCYGAET - ProtClustDB: PRK00052 - BioCyc: CPER195102:CPE2514-MONOMER - HAMAP: MF_01147 - InterPro: IPR001640 - TIGRFAMs: TIGR00544
Pfam domain/function: PF01790 LGT
EC number: 2.4.99.- [C]
Molecular weight: Translated: 27996; Mature: 27996
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: PS01311 LGT
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xf458e70)-; HASH(0x10f4bc84)-; HASH(0x10f46454)-; HASH(0x10dc9d80)-; HASH(0x10f4bb7c)-; HASH(0x10ec4a84)-; HASH(0x10f4664c)-;
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIVLGEIFGLKIYSYGFMIGLGIICATLLFLKRGTQRGYNEDKLFNATILTVISGILGG CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC KILYIITEWKTVMQDPSLIFRDFGNGFVIYGAIIGGALGIALCSLKNKWNVLELADLVVP EEEEEEEHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GLALAQGFGRIGCLLAGCCYGAETTSSIGIIFPADSLAPAGVPLYPTQIFSSIFDFALGL HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH FLLWYGNKNKEKGKTMSMYMIIYSIGRFFVEFLRNDPRGSVGLLSTSQFISIFILIGGIL HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHH LYNINKLKGRKETGEK HHHHHHHCCCCCCCCH >Mature Secondary Structure MRIVLGEIFGLKIYSYGFMIGLGIICATLLFLKRGTQRGYNEDKLFNATILTVISGILGG CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC KILYIITEWKTVMQDPSLIFRDFGNGFVIYGAIIGGALGIALCSLKNKWNVLELADLVVP EEEEEEEHHHHHHCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH GLALAQGFGRIGCLLAGCCYGAETTSSIGIIFPADSLAPAGVPLYPTQIFSSIFDFALGL HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH FLLWYGNKNKEKGKTMSMYMIIYSIGRFFVEFLRNDPRGSVGLLSTSQFISIFILIGGIL HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHH LYNINKLKGRKETGEK HHHHHHHCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11792842