| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311497
Identifier: 18311497
GI number: 18311497
Start: 2879339
End: 2879911
Strand: Reverse
Name: 18311497
Synonym: CPE2515
Alternate gene names: NA
Gene position: 2879911-2879339 (Counterclockwise)
Preceding gene: 18311498
Following gene: 18311496
Centisome position: 95.0
GC content: 27.05
Gene sequence:
>573_bases TTGAATAAAAAACAATTTGGTATAACCCTAATATTAGTTTTGCTTATGATAATATTGGTAACTGGTGAAAATATGTTTAC TGGAAATATAAAAAAAGTTGCATTAACAAATAATAATATTGAAGGGCTAAGTACATATACCGCCCTAGATGGTCTTTTAA CCTATAAGTTACCTGATAGTTGGGACGTTGAAGAAAAAAAATACCCAGGAAATTATATTATTTATGATAATAGTTTTATA AGTGACACTATGGGCTTATGGGGATATGTGCAGATTTTAAATTCAAATGATGATTTAGAAAAGATGGTTGAGAAGGAAAA AGAGCTTATTAGTAAGAATGATATAAGTGACTATTTAGTATCTGATGAAAGTCTTAATGATGAATTAGTAAAGAAGGTAG TTTTTAAAGAAAAAAATCAAAAGGGAGTAACCTACGTTAATACTGTTTATTATAAAAAGTTGGGAGAAAATAAAATAATA AAGGTATTATTTAGTGCAAGTGAAAGTAAGCAAAAAGAAGATTATTCAATAATATATAAAGCCATAATTGATAGTATAGA GCATGAGGAGTAG
Upstream 100 bases:
>100_bases TTTATTTATGTAATATTAATACTCTATTTAGTAATTTTTACTTACTTATTGAATATATTTTAAATATAGACTTTCCTAAA AGATGAAAAGAGGTGATTTT
Downstream 100 bases:
>100_bases AAAATTTGATTTGCTTTAGTAGAAGTATTATAATTAAATTTAAAAGAGAAGCATAATAATATGCTTCTCTTTTAAATTTA CAAATAAATATTGGAGGAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 190; Mature: 190
Protein sequence:
>190_residues MNKKQFGITLILVLLMIILVTGENMFTGNIKKVALTNNNIEGLSTYTALDGLLTYKLPDSWDVEEKKYPGNYIIYDNSFI SDTMGLWGYVQILNSNDDLEKMVEKEKELISKNDISDYLVSDESLNDELVKKVVFKEKNQKGVTYVNTVYYKKLGENKII KVLFSASESKQKEDYSIIYKAIIDSIEHEE
Sequences:
>Translated_190_residues MNKKQFGITLILVLLMIILVTGENMFTGNIKKVALTNNNIEGLSTYTALDGLLTYKLPDSWDVEEKKYPGNYIIYDNSFI SDTMGLWGYVQILNSNDDLEKMVEKEKELISKNDISDYLVSDESLNDELVKKVVFKEKNQKGVTYVNTVYYKKLGENKII KVLFSASESKQKEDYSIIYKAIIDSIEHEE >Mature_190_residues MNKKQFGITLILVLLMIILVTGENMFTGNIKKVALTNNNIEGLSTYTALDGLLTYKLPDSWDVEEKKYPGNYIIYDNSFI SDTMGLWGYVQILNSNDDLEKMVEKEKELISKNDISDYLVSDESLNDELVKKVVFKEKNQKGVTYVNTVYYKKLGENKII KVLFSASESKQKEDYSIIYKAIIDSIEHEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21821; Mature: 21821
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKQFGITLILVLLMIILVTGENMFTGNIKKVALTNNNIEGLSTYTALDGLLTYKLPDS CCCCHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCHHHHHHHHHEEEEECCCC WDVEEKKYPGNYIIYDNSFISDTMGLWGYVQILNSNDDLEKMVEKEKELISKNDISDYLV CCCCCCCCCCCEEEECCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHC SDESLNDELVKKVVFKEKNQKGVTYVNTVYYKKLGENKIIKVLFSASESKQKEDYSIIYK CCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCEEHEEECCCCCCCHHHHHHHHH AIIDSIEHEE HHHHHHCCCC >Mature Secondary Structure MNKKQFGITLILVLLMIILVTGENMFTGNIKKVALTNNNIEGLSTYTALDGLLTYKLPDS CCCCHHHHHHHHHHHHHHHHCCCCEEECCEEEEEEECCCCCCHHHHHHHHHEEEEECCCC WDVEEKKYPGNYIIYDNSFISDTMGLWGYVQILNSNDDLEKMVEKEKELISKNDISDYLV CCCCCCCCCCCEEEECCCHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHC SDESLNDELVKKVVFKEKNQKGVTYVNTVYYKKLGENKIIKVLFSASESKQKEDYSIIYK CCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHCCCCCEEHEEECCCCCCCHHHHHHHHH AIIDSIEHEE HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA