Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311495

Identifier: 18311495

GI number: 18311495

Start: 2877637

End: 2878476

Strand: Reverse

Name: 18311495

Synonym: CPE2513

Alternate gene names: NA

Gene position: 2878476-2877637 (Counterclockwise)

Preceding gene: 18311496

Following gene: 18311494

Centisome position: 94.95

GC content: 26.9

Gene sequence:

>840_bases
GTGAAAAATAAGAAATTAATTCTAGTAATACTTTGCTTAGTTTTAGGATTAGGCATTGCTGGATGTTCAGCTAAAGATAT
AAGCTCAAAATTTGTTGGGAGTAATAATAATGACTTTGAATATATAAAAGAAAATAAAGTTGATAAAATAGTTATTCAAA
GTACAAGAGATTCTGGTTTTAGGTTTTTAGTAAAAGAAAAGTCAGTAATAGACAATATATACAGTATGTTATCTAAAGCT
GAGGTTGTTAGCAAAAAGACAGATTTACCTCCAGATTATATTTTTGAAATCCATGTTGGTGATGAAGAAAAGAAATTCTA
TTATGTAACAGGTGTAAAAAATAATGGAGAAGGTAATTTCTACGATGGAGATCACTTTTATAGAATATCTAAGAGATTAG
ATAACTATTTAATGCAAAATATGCAGGCAATAAGAAAACCTAGAGCTTTTGATGAAATATACTATAATTCAATACTTGAA
GTAATGAAAAAAGAAAAAGATGAACTAAACAAAGATAATGCCAAAGTTGGTATTGATATACTTGGAGATAGAGATTGTAC
AAAATATATGTTATCATCAGATATTGAAGATTTTGAAAAAGATGTAAAAAAAGTAGTTCCAAATGCTTCAATAATGAACC
ATAATAGAGATGACTTTGATATAATAGTTACTGTAAGAAATTATGGTTATACATCTACTATGTTTAGAACTGTAATAACT
ATTGAAAACAGATTAACTCATTCAGAGAAAAAATTCTATGTAGATGGAGTTTATAAGAACTCTTGGGACATCAATGTTTA
TGATAGTTGGAAAGATGTTCAAAAGGAATGGGATAGATAA

Upstream 100 bases:

>100_bases
GTAGGATTATTATCAACATCTCAATTTATATCAATATTTATATTAATAGGGGGTATATTACTATATAATATAAATAAATT
AAAAGGGAGAAAAGAAACAG

Downstream 100 bases:

>100_bases
CAGAATGGAGGATTTTTCTTATGGGAAGTTGTGCAAGTTGTGCAAATAAAGACAAATGTAGTTCAGCTAGTAAAGATGGA
GGATGTAGTTCATCAGTACC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKNKKLILVILCLVLGLGIAGCSAKDISSKFVGSNNNDFEYIKENKVDKIVIQSTRDSGFRFLVKEKSVIDNIYSMLSKA
EVVSKKTDLPPDYIFEIHVGDEEKKFYYVTGVKNNGEGNFYDGDHFYRISKRLDNYLMQNMQAIRKPRAFDEIYYNSILE
VMKKEKDELNKDNAKVGIDILGDRDCTKYMLSSDIEDFEKDVKKVVPNASIMNHNRDDFDIIVTVRNYGYTSTMFRTVIT
IENRLTHSEKKFYVDGVYKNSWDINVYDSWKDVQKEWDR

Sequences:

>Translated_279_residues
MKNKKLILVILCLVLGLGIAGCSAKDISSKFVGSNNNDFEYIKENKVDKIVIQSTRDSGFRFLVKEKSVIDNIYSMLSKA
EVVSKKTDLPPDYIFEIHVGDEEKKFYYVTGVKNNGEGNFYDGDHFYRISKRLDNYLMQNMQAIRKPRAFDEIYYNSILE
VMKKEKDELNKDNAKVGIDILGDRDCTKYMLSSDIEDFEKDVKKVVPNASIMNHNRDDFDIIVTVRNYGYTSTMFRTVIT
IENRLTHSEKKFYVDGVYKNSWDINVYDSWKDVQKEWDR
>Mature_279_residues
MKNKKLILVILCLVLGLGIAGCSAKDISSKFVGSNNNDFEYIKENKVDKIVIQSTRDSGFRFLVKEKSVIDNIYSMLSKA
EVVSKKTDLPPDYIFEIHVGDEEKKFYYVTGVKNNGEGNFYDGDHFYRISKRLDNYLMQNMQAIRKPRAFDEIYYNSILE
VMKKEKDELNKDNAKVGIDILGDRDCTKYMLSSDIEDFEKDVKKVVPNASIMNHNRDDFDIIVTVRNYGYTSTMFRTVIT
IENRLTHSEKKFYVDGVYKNSWDINVYDSWKDVQKEWDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32566; Mature: 32566

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNKKLILVILCLVLGLGIAGCSAKDISSKFVGSNNNDFEYIKENKVDKIVIQSTRDSGF
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCCCC
RFLVKEKSVIDNIYSMLSKAEVVSKKTDLPPDYIFEIHVGDEEKKFYYVTGVKNNGEGNF
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCC
YDGDHFYRISKRLDNYLMQNMQAIRKPRAFDEIYYNSILEVMKKEKDELNKDNAKVGIDI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
LGDRDCTKYMLSSDIEDFEKDVKKVVPNASIMNHNRDDFDIIVTVRNYGYTSTMFRTVIT
ECCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEEECCCCHHHHHHHHHH
IENRLTHSEKKFYVDGVYKNSWDINVYDSWKDVQKEWDR
HHHHHCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHCC
>Mature Secondary Structure
MKNKKLILVILCLVLGLGIAGCSAKDISSKFVGSNNNDFEYIKENKVDKIVIQSTRDSGF
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHCCCCCEEEEEECCCCCC
RFLVKEKSVIDNIYSMLSKAEVVSKKTDLPPDYIFEIHVGDEEKKFYYVTGVKNNGEGNF
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCCCC
YDGDHFYRISKRLDNYLMQNMQAIRKPRAFDEIYYNSILEVMKKEKDELNKDNAKVGIDI
CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
LGDRDCTKYMLSSDIEDFEKDVKKVVPNASIMNHNRDDFDIIVTVRNYGYTSTMFRTVIT
ECCCHHHHHHHHCCHHHHHHHHHHHCCCCHHHCCCCCCEEEEEEEECCCCHHHHHHHHHH
IENRLTHSEKKFYVDGVYKNSWDINVYDSWKDVQKEWDR
HHHHHCCCCCEEEEEEEECCCCEEEEECCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA