| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is add [H]
Identifier: 18311488
GI number: 18311488
Start: 2869991
End: 2870989
Strand: Reverse
Name: add [H]
Synonym: CPE2506
Alternate gene names: 18311488
Gene position: 2870989-2869991 (Counterclockwise)
Preceding gene: 18311489
Following gene: 18311487
Centisome position: 94.71
GC content: 29.53
Gene sequence:
>999_bases ATGAACTTATTAAATTTACCAAAGATAGAATTACATTGTCATCTAGATGGATCCTTAAGAGTGGAGACTGCTATTGAATT AGCTAAAAAAGAAGGAGTTAAGCTAGATAGCTATGAATATGATAAGGTAAAAGAATTACTAGTTATTCCTAAAGAATGCA ATTCATTAGAAGATTATTTAAATAGATTTGCTCTTCCAGTAAAACTGTTACAAAGAGCTGAGAACTTAGAAAGAGTTGCC TTTGAACTTATGGAAGATGCAAGCAAGGAAAATGTGAAGTACATAGAAATAAGATTTGCTCCATTATTGCATTTAGAAAA GGGGATGACTCAAAAAGAAGTAATAGAGAGTGTAATAAAGGGAATACGAAAAGCTGAAGAGCTTTATGACATAAAAGGTA ATTTAATATTATCTTGTTTAAGACATCATTCTATAGATAGTGTATATGAGGTAATTGAAGAGGGGAAAAACTTCATAGGA AAAGGTGTTGTTGCCATAGACTTAGCTGGTGGTGAATTAGAAGGTTTTGTTAAACCTTATGAAGAAGTAATGAAATTAGC AAGAGAATCAGGTTTTAGAGTTACAATACACGCTGGTGAAACTGGGTATGGTAAAAATGTTAGAGATGCCATAGAGCTTC TAGGTGCAGAGAGAATAGGTCATGGATTATTTATATTTAATGATGAAGAGGCTTATAATTTAGTAAAAGAAAAAGGCGTA ACATTAGAAATGTGCCCTAAGAGTAATATAGACACAAAGGGTGTGAATAAATATGAGGATCATCCTATTTATAAATATCA TAAAGATAATATAAGAGTTAATTTAAGTACAGATAACAGAACAGTTTCTAATATAAATCTTACTGAAGAATTTGAAAATG TACATAAGACATTTAATATAGATTTTGAAGATTATAAAAAGATTTATTTAAATAGTGTGGAAGCTTCCTTCTGTTCAGAA GAGTTAAAGGAAAAATTAAAATTATCCATAATTATATAA
Upstream 100 bases:
>100_bases AGAATTTTTTTTTGAACCTTTTTTAGGATATATAAATTCTTTATTCAATATTAGAAATTTTAGTTTTAATATAAATATTT AATTCGGGGAGGAAATATAA
Downstream 100 bases:
>100_bases ATTCAAAATAATCCACAGGCAAATAGAACTTAATTTACCTGTGGATTATTTTTTAATTCAACAACTGTGGATATTTTTCA AAAAATTATTCTGTGGATAA
Product: adenosine deaminase
Products: NA
Alternate protein names: Adenosine aminohydrolase [H]
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MNLLNLPKIELHCHLDGSLRVETAIELAKKEGVKLDSYEYDKVKELLVIPKECNSLEDYLNRFALPVKLLQRAENLERVA FELMEDASKENVKYIEIRFAPLLHLEKGMTQKEVIESVIKGIRKAEELYDIKGNLILSCLRHHSIDSVYEVIEEGKNFIG KGVVAIDLAGGELEGFVKPYEEVMKLARESGFRVTIHAGETGYGKNVRDAIELLGAERIGHGLFIFNDEEAYNLVKEKGV TLEMCPKSNIDTKGVNKYEDHPIYKYHKDNIRVNLSTDNRTVSNINLTEEFENVHKTFNIDFEDYKKIYLNSVEASFCSE ELKEKLKLSIII
Sequences:
>Translated_332_residues MNLLNLPKIELHCHLDGSLRVETAIELAKKEGVKLDSYEYDKVKELLVIPKECNSLEDYLNRFALPVKLLQRAENLERVA FELMEDASKENVKYIEIRFAPLLHLEKGMTQKEVIESVIKGIRKAEELYDIKGNLILSCLRHHSIDSVYEVIEEGKNFIG KGVVAIDLAGGELEGFVKPYEEVMKLARESGFRVTIHAGETGYGKNVRDAIELLGAERIGHGLFIFNDEEAYNLVKEKGV TLEMCPKSNIDTKGVNKYEDHPIYKYHKDNIRVNLSTDNRTVSNINLTEEFENVHKTFNIDFEDYKKIYLNSVEASFCSE ELKEKLKLSIII >Mature_332_residues MNLLNLPKIELHCHLDGSLRVETAIELAKKEGVKLDSYEYDKVKELLVIPKECNSLEDYLNRFALPVKLLQRAENLERVA FELMEDASKENVKYIEIRFAPLLHLEKGMTQKEVIESVIKGIRKAEELYDIKGNLILSCLRHHSIDSVYEVIEEGKNFIG KGVVAIDLAGGELEGFVKPYEEVMKLARESGFRVTIHAGETGYGKNVRDAIELLGAERIGHGLFIFNDEEAYNLVKEKGV TLEMCPKSNIDTKGVNKYEDHPIYKYHKDNIRVNLSTDNRTVSNINLTEEFENVHKTFNIDFEDYKKIYLNSVEASFCSE ELKEKLKLSIII
Specific function: Unknown
COG id: COG1816
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenosine and AMP deaminases family [H]
Homologues:
Organism=Homo sapiens, GI47078295, Length=341, Percent_Identity=30.4985337243402, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI226693318, Length=337, Percent_Identity=25.2225519287834, Blast_Score=93, Evalue=4e-19, Organism=Homo sapiens, GI61175224, Length=230, Percent_Identity=27.8260869565217, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1787910, Length=328, Percent_Identity=29.5731707317073, Blast_Score=157, Evalue=7e-40, Organism=Caenorhabditis elegans, GI17538512, Length=337, Percent_Identity=34.7181008902077, Blast_Score=164, Evalue=8e-41, Organism=Caenorhabditis elegans, GI32565969, Length=337, Percent_Identity=34.7181008902077, Blast_Score=164, Evalue=9e-41, Organism=Caenorhabditis elegans, GI115537133, Length=333, Percent_Identity=24.3243243243243, Blast_Score=79, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6324188, Length=330, Percent_Identity=26.969696969697, Blast_Score=124, Evalue=2e-29, Organism=Drosophila melanogaster, GI24645260, Length=328, Percent_Identity=26.5243902439024, Blast_Score=107, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001365 - InterPro: IPR006330 [H]
Pfam domain/function: PF00962 A_deaminase [H]
EC number: =3.5.4.4 [H]
Molecular weight: Translated: 38015; Mature: 38015
Theoretical pI: Translated: 5.25; Mature: 5.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLLNLPKIELHCHLDGSLRVETAIELAKKEGVKLDSYEYDKVKELLVIPKECNSLEDYL CCCCCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHCCHHHHHH NRFALPVKLLQRAENLERVAFELMEDASKENVKYIEIRFAPLLHLEKGMTQKEVIESVIK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHCCCHHHHHHHHHH GIRKAEELYDIKGNLILSCLRHHSIDSVYEVIEEGKNFIGKGVVAIDLAGGELEGFVKPY HHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCHHHHCCCEEEEEECCCCHHHHHHHH EEVMKLARESGFRVTIHAGETGYGKNVRDAIELLGAERIGHGLFIFNDEEAYNLVKEKGV HHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCC TLEMCPKSNIDTKGVNKYEDHPIYKYHKDNIRVNLSTDNRTVSNINLTEEFENVHKTFNI EEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEEECCHHHHHHHHHHEECC DFEDYKKIYLNSVEASFCSEELKEKLKLSIII CHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEC >Mature Secondary Structure MNLLNLPKIELHCHLDGSLRVETAIELAKKEGVKLDSYEYDKVKELLVIPKECNSLEDYL CCCCCCCCEEEEEECCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHCCHHHHHH NRFALPVKLLQRAENLERVAFELMEDASKENVKYIEIRFAPLLHLEKGMTQKEVIESVIK HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHCCCHHHHHHHHHH GIRKAEELYDIKGNLILSCLRHHSIDSVYEVIEEGKNFIGKGVVAIDLAGGELEGFVKPY HHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHCHHHHCCCEEEEEECCCCHHHHHHHH EEVMKLARESGFRVTIHAGETGYGKNVRDAIELLGAERIGHGLFIFNDEEAYNLVKEKGV HHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCC TLEMCPKSNIDTKGVNKYEDHPIYKYHKDNIRVNLSTDNRTVSNINLTEEFENVHKTFNI EEEECCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCEEEEECCHHHHHHHHHHEECC DFEDYKKIYLNSVEASFCSEELKEKLKLSIII CHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA