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The map label for this gene is nrdD [H]

Identifier: 18311489

GI number: 18311489

Start: 2871382

End: 2873499

Strand: Reverse

Name: nrdD [H]

Synonym: CPE2507

Alternate gene names: 18311489

Gene position: 2873499-2871382 (Counterclockwise)

Preceding gene: 18311493

Following gene: 18311488

Centisome position: 94.79

GC content: 31.49

Gene sequence:

>2118_bases
ATGCTACATGTTGTGAAAAGGGACGGTAGAGAATCTAGGTTTAATGCGGATAAAATAGCAAATGCAATAAAGAGAGCAGC
CAATGAAGTTGGTATTGCAATAAGGGAAAGCCAAGTTTTAGATACTATACAAAAGGTAATTAATTATATTGAAATGTCAG
GTAAGACAGATGTCACTGTTGAAGAAATTCAAGTTTTAGTAGAAAAGGCTTTAATGGATAATGGTTTTAACCAAGTAGCA
ACAGCATATAAGGCATATAGAACTGAAAGAACTAAAGTTAGAGAAATAAAATCAGACTTAATGAAAGCTATAAGTAAGAT
CGGAGTAGAGACTGATAGAGATAATGCCAATGTAGGGAATAACTTCTCATCAAAGCTTTTAAGAATAGCTTCAGAATCTA
ACAAATGGTATAACTTAGCTACAATGCCTAAAGAATTAGCAAAAGCTCATGAAAATGGAGATGTGTATTATCATGACTTA
GATAGTTACAATTTAACTACTAACTGCTTACACATACCAACTGGTGAGTTATTACAAAGTGGATTTAACACTGGATACGG
AACTATTAAGGCACCAAGAAGAATAGAGACAGCAGCAGAATTATCATGTATTTTATTACAATCAACTCAAAATGATATGT
TTGGAGGACAATCACATCCAGACTTTGATAATGATATGAGTGTTTTTGTAGAACCTACAAGACAAGAGATAAGAGAAGAA
TACATAGGATTAGGCTTAGAAGGAGCTAAATTAGATGAACTAGTAGAGAAAAAATTAAGAGAAAGAGTGCATCAAGCAAT
GCAAGGAGTTGTTTATAATTTAAACACTATGCATTCAAGAGCAGGATCTCAAGTTCCTTTTAGTTCATTAAACTTAGGAA
TTCCATACAATGAAGATGCTGCTTTAGTTTGTGAAATATTCTTATTAGAATACGAAAAAGGATTAGGAAGAGGAGAACAA
CCAATATTCCCTAATATAATCTTTAGAGTAAAAGAAGGTGTAAATAGAGAAGTAGAGGATCCATATTTCTATTTATATGA
ATTAGCTTGCAGAGTAGCAGCTAAGAGAATGAATCCAACTTTCATGAATATCGATGCGGACTTTAATAAGGAATACTATG
ATAAGGGATATATGCCAGCAACTATGGGATGTAGAACTTATCTTATGAAAAATGTTAATGGTGAACCAGGATGTAAAGGA
AGAGGAAATATAGCTCCTACAACTATAAACCTTCCTAGACTTGGAATATTAGCTAAAAAAGATATTAATAAATTCTTTGA
TTTATTAGATGATAGATTAAGAATAGCTAAAGAATCTTTAATGCACAGATATGGAGTTCTTAAAAACTTAAAAGTTAAGG
ATTTACCTTTTGTTGCAGGTCAAGGATTAATGAAAGGTGCTGAAAACTTAGGCCCAGATGATTCAATAGAACCAATTTTA
AAACAAGGTACTTGGGGAATTGGATTTATAGGAATTGCAGAAACTTTAATAGCCTTAACTGGAAAGCATCATGGTGAAGA
TGAAACTTCAAGAGAATTAGGAATAAAAATAGTTGAGAGAATAAGAGAATATTGTGATAGATTAACTGAGGAAACTAGAT
TAAACTGGAGCTGTTATGCTACTCCAGCAGAAGGATTATCAGGTAAATTTATAAAGCAAGATAAAAAAGCCTTTGGAATA
ATTAAAGGAGTAACAGATAAAGATTACTATACAAATAGTTACCATGTTCCTGTTTACTGCCCAATATCAATAAAAAATAA
GATAGATATTGAAGCACCATATCATAAATTATGTAATGGTGGACATATCAGTTATATAGAAGTTGATGATTGTCCAAATG
CAGAAACTATAATGAAAATAGTTAACTATGCTTATAAAGAAACTAATATAAGTTATATGGGAATTAACTTCCATATAAGA
TATTGTAAAAATTGTGGAACATATCTTCATAATAATGAGTGCAAATGTACTAAATGTGGATGCCAAGATATTCAAGGGAT
ATCAAGGGTTACTGGATACTTAAGTCTTGATGAAAGATTTGGTCCAGGAAAATATGAAGAGAGAGAAGATAGACGTTCTC
ACTTAGAAGGAAATAAAAAAGCTTATCACTGTGTTTAA

Upstream 100 bases:

>100_bases
GTCTTTTTTTTAGTATAAGGATTTTTTAAAATTAGCATAACTATTAATAGTAGAGTATAATGATTCGAGTACAAGATATA
GTGGAGTGGAGGAATTGAAA

Downstream 100 bases:

>100_bases
TATTTTCAATGAAATTATTTATATAAGTTTATAGAAAAATCTATGCAATGTATTTTATATATTATCTTAATTAGATAAAA
ATTTAATACATGTGCATAGA

Product: anaerobic ribonucleoside triphosphate reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 705; Mature: 705

Protein sequence:

>705_residues
MLHVVKRDGRESRFNADKIANAIKRAANEVGIAIRESQVLDTIQKVINYIEMSGKTDVTVEEIQVLVEKALMDNGFNQVA
TAYKAYRTERTKVREIKSDLMKAISKIGVETDRDNANVGNNFSSKLLRIASESNKWYNLATMPKELAKAHENGDVYYHDL
DSYNLTTNCLHIPTGELLQSGFNTGYGTIKAPRRIETAAELSCILLQSTQNDMFGGQSHPDFDNDMSVFVEPTRQEIREE
YIGLGLEGAKLDELVEKKLRERVHQAMQGVVYNLNTMHSRAGSQVPFSSLNLGIPYNEDAALVCEIFLLEYEKGLGRGEQ
PIFPNIIFRVKEGVNREVEDPYFYLYELACRVAAKRMNPTFMNIDADFNKEYYDKGYMPATMGCRTYLMKNVNGEPGCKG
RGNIAPTTINLPRLGILAKKDINKFFDLLDDRLRIAKESLMHRYGVLKNLKVKDLPFVAGQGLMKGAENLGPDDSIEPIL
KQGTWGIGFIGIAETLIALTGKHHGEDETSRELGIKIVERIREYCDRLTEETRLNWSCYATPAEGLSGKFIKQDKKAFGI
IKGVTDKDYYTNSYHVPVYCPISIKNKIDIEAPYHKLCNGGHISYIEVDDCPNAETIMKIVNYAYKETNISYMGINFHIR
YCKNCGTYLHNNECKCTKCGCQDIQGISRVTGYLSLDERFGPGKYEEREDRRSHLEGNKKAYHCV

Sequences:

>Translated_705_residues
MLHVVKRDGRESRFNADKIANAIKRAANEVGIAIRESQVLDTIQKVINYIEMSGKTDVTVEEIQVLVEKALMDNGFNQVA
TAYKAYRTERTKVREIKSDLMKAISKIGVETDRDNANVGNNFSSKLLRIASESNKWYNLATMPKELAKAHENGDVYYHDL
DSYNLTTNCLHIPTGELLQSGFNTGYGTIKAPRRIETAAELSCILLQSTQNDMFGGQSHPDFDNDMSVFVEPTRQEIREE
YIGLGLEGAKLDELVEKKLRERVHQAMQGVVYNLNTMHSRAGSQVPFSSLNLGIPYNEDAALVCEIFLLEYEKGLGRGEQ
PIFPNIIFRVKEGVNREVEDPYFYLYELACRVAAKRMNPTFMNIDADFNKEYYDKGYMPATMGCRTYLMKNVNGEPGCKG
RGNIAPTTINLPRLGILAKKDINKFFDLLDDRLRIAKESLMHRYGVLKNLKVKDLPFVAGQGLMKGAENLGPDDSIEPIL
KQGTWGIGFIGIAETLIALTGKHHGEDETSRELGIKIVERIREYCDRLTEETRLNWSCYATPAEGLSGKFIKQDKKAFGI
IKGVTDKDYYTNSYHVPVYCPISIKNKIDIEAPYHKLCNGGHISYIEVDDCPNAETIMKIVNYAYKETNISYMGINFHIR
YCKNCGTYLHNNECKCTKCGCQDIQGISRVTGYLSLDERFGPGKYEEREDRRSHLEGNKKAYHCV
>Mature_705_residues
MLHVVKRDGRESRFNADKIANAIKRAANEVGIAIRESQVLDTIQKVINYIEMSGKTDVTVEEIQVLVEKALMDNGFNQVA
TAYKAYRTERTKVREIKSDLMKAISKIGVETDRDNANVGNNFSSKLLRIASESNKWYNLATMPKELAKAHENGDVYYHDL
DSYNLTTNCLHIPTGELLQSGFNTGYGTIKAPRRIETAAELSCILLQSTQNDMFGGQSHPDFDNDMSVFVEPTRQEIREE
YIGLGLEGAKLDELVEKKLRERVHQAMQGVVYNLNTMHSRAGSQVPFSSLNLGIPYNEDAALVCEIFLLEYEKGLGRGEQ
PIFPNIIFRVKEGVNREVEDPYFYLYELACRVAAKRMNPTFMNIDADFNKEYYDKGYMPATMGCRTYLMKNVNGEPGCKG
RGNIAPTTINLPRLGILAKKDINKFFDLLDDRLRIAKESLMHRYGVLKNLKVKDLPFVAGQGLMKGAENLGPDDSIEPIL
KQGTWGIGFIGIAETLIALTGKHHGEDETSRELGIKIVERIREYCDRLTEETRLNWSCYATPAEGLSGKFIKQDKKAFGI
IKGVTDKDYYTNSYHVPVYCPISIKNKIDIEAPYHKLCNGGHISYIEVDDCPNAETIMKIVNYAYKETNISYMGINFHIR
YCKNCGTYLHNNECKCTKCGCQDIQGISRVTGYLSLDERFGPGKYEEREDRRSHLEGNKKAYHCV

Specific function: Unknown

COG id: COG1328

COG function: function code F; Oxygen-sensitive ribonucleoside-triphosphate reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glycine radical domain [H]

Homologues:

Organism=Escherichia coli, GI1790686, Length=723, Percent_Identity=33.6099585062241, Blast_Score=353, Evalue=2e-98,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005144
- InterPro:   IPR001150
- InterPro:   IPR019777
- InterPro:   IPR012833 [H]

Pfam domain/function: PF03477 ATP-cone; PF01228 Gly_radical [H]

EC number: =1.17.4.2 [H]

Molecular weight: Translated: 79791; Mature: 79791

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: PS51161 ATP_CONE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHVVKRDGRESRFNADKIANAIKRAANEVGIAIRESQVLDTIQKVINYIEMSGKTDVTV
CCEEECCCCCCCCCCHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHCCCCCCCCH
EEIQVLVEKALMDNGFNQVATAYKAYRTERTKVREIKSDLMKAISKIGVETDRDNANVGN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NFSSKLLRIASESNKWYNLATMPKELAKAHENGDVYYHDLDSYNLTTNCLHIPTGELLQS
CHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCHHHHHC
GFNTGYGTIKAPRRIETAAELSCILLQSTQNDMFGGQSHPDFDNDMSVFVEPTRQEIREE
CCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHH
YIGLGLEGAKLDELVEKKLRERVHQAMQGVVYNLNTMHSRAGSQVPFSSLNLGIPYNEDA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCH
ALVCEIFLLEYEKGLGRGEQPIFPNIIFRVKEGVNREVEDPYFYLYELACRVAAKRMNPT
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCE
FMNIDADFNKEYYDKGYMPATMGCRTYLMKNVNGEPGCKGRGNIAPTTINLPRLGILAKK
EEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHH
DINKFFDLLDDRLRIAKESLMHRYGVLKNLKVKDLPFVAGQGLMKGAENLGPDDSIEPIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHCCCCCCHHHHH
KQGTWGIGFIGIAETLIALTGKHHGEDETSRELGIKIVERIREYCDRLTEETRLNWSCYA
HCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
TPAEGLSGKFIKQDKKAFGIIKGVTDKDYYTNSYHVPVYCPISIKNKIDIEAPYHKLCNG
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCEECCCCHHHHCCC
GHISYIEVDDCPNAETIMKIVNYAYKETNISYMGINFHIRYCKNCGTYLHNNECKCTKCG
CCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEEEHHCCCCCEECCCCCEECCC
CQDIQGISRVTGYLSLDERFGPGKYEEREDRRSHLEGNKKAYHCV
HHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCEECCC
>Mature Secondary Structure
MLHVVKRDGRESRFNADKIANAIKRAANEVGIAIRESQVLDTIQKVINYIEMSGKTDVTV
CCEEECCCCCCCCCCHHHHHHHHHHHHHHHCEEEEHHHHHHHHHHHHHHHHCCCCCCCCH
EEIQVLVEKALMDNGFNQVATAYKAYRTERTKVREIKSDLMKAISKIGVETDRDNANVGN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
NFSSKLLRIASESNKWYNLATMPKELAKAHENGDVYYHDLDSYNLTTNCLHIPTGELLQS
CHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCHHHHHC
GFNTGYGTIKAPRRIETAAELSCILLQSTQNDMFGGQSHPDFDNDMSVFVEPTRQEIREE
CCCCCCCCCCCCHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHH
YIGLGLEGAKLDELVEKKLRERVHQAMQGVVYNLNTMHSRAGSQVPFSSLNLGIPYNEDA
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCH
ALVCEIFLLEYEKGLGRGEQPIFPNIIFRVKEGVNREVEDPYFYLYELACRVAAKRMNPT
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCE
FMNIDADFNKEYYDKGYMPATMGCRTYLMKNVNGEPGCKGRGNIAPTTINLPRLGILAKK
EEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHH
DINKFFDLLDDRLRIAKESLMHRYGVLKNLKVKDLPFVAGQGLMKGAENLGPDDSIEPIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHCCCCCCHHHHH
KQGTWGIGFIGIAETLIALTGKHHGEDETSRELGIKIVERIREYCDRLTEETRLNWSCYA
HCCCCCEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
TPAEGLSGKFIKQDKKAFGIIKGVTDKDYYTNSYHVPVYCPISIKNKIDIEAPYHKLCNG
CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEEEECCCEECCCCHHHHCCC
GHISYIEVDDCPNAETIMKIVNYAYKETNISYMGINFHIRYCKNCGTYLHNNECKCTKCG
CCEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEEEEEEEEHHCCCCCEECCCCCEECCC
CQDIQGISRVTGYLSLDERFGPGKYEEREDRRSHLEGNKKAYHCV
HHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8421692; 7610040; 9278503; 8083158; 7852304 [H]