| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is gmk
Identifier: 18311434
GI number: 18311434
Start: 2798306
End: 2798896
Strand: Reverse
Name: gmk
Synonym: CPE2452
Alternate gene names: NA
Gene position: 2798896-2798306 (Counterclockwise)
Preceding gene: 18311435
Following gene: 18311433
Centisome position: 92.33
GC content: 25.89
Gene sequence:
>591_bases ATGGGTAAAATATTTTGCATAATGGGGAAAAGTGGTTCTGGTAAGGATACTATTTTAAAAGAGATAAATAAGGTTGAAGA TTTAAATTTAAAAACTATAGTTACATATACAACTAGACCTAAAAGAAATAATGAAACAGATGGAGTGGAATATTTCTTTA TAGATAAAGAAAAGCTAGATGATTTTAACAGAGAAGGTAAGATAATAGAATGTAGAGTTTATGATACTGTTCATGGAAAA TGGTATTACCTAACTGTAGATGATGGCCAAATAAACTTAGAAGAAAATAATTATATAGTTATTGTAACTTTAGAGGCTTA TTCTGAGTTTAGAAAATATTTTGGAGATGAAAAATTAGTACCACTTTACATAGACTTAGATGATGGAGTTAGACTTGAAA GAGCATTAAAAAGAGAGAGAGAACAGAAAAGTCCTAATTATAATGAGATGTGCAGAAGATTTTTAGCAGATAATGAAGAT TTTAGTGAAGATAAATTACTAAATAACAATATAATTAAGAAATATAACAATTACAATTTAGAAGAATGTATAAGTGAAAT ATGTGATGTAATAAGAAAAACTTCTAAATAA
Upstream 100 bases:
>100_bases TTGTATTAAAATTATTACATAAAACTTTTTAGGGAGTTTTATAGAATTTATTTAATATATTTTTAGAGAAAAAAACGTGT TTATATAGATTGGAGTAGTT
Downstream 100 bases:
>100_bases TCTGGGGGAAAATAATATGAAAAATGCATTAAAGTTAACTTTTATTGGATTTCTAATAATATTAGTAGGAATATACTTAG CGGTTTCTGATATAGATACA
Product: guanylate kinase-like protein
Products: NA
Alternate protein names: Guanylate Kinase/L-Type Calcium Channel Region; Guanylate Kinase-Like Protein
Number of amino acids: Translated: 196; Mature: 195
Protein sequence:
>196_residues MGKIFCIMGKSGSGKDTILKEINKVEDLNLKTIVTYTTRPKRNNETDGVEYFFIDKEKLDDFNREGKIIECRVYDTVHGK WYYLTVDDGQINLEENNYIVIVTLEAYSEFRKYFGDEKLVPLYIDLDDGVRLERALKREREQKSPNYNEMCRRFLADNED FSEDKLLNNNIIKKYNNYNLEECISEICDVIRKTSK
Sequences:
>Translated_196_residues MGKIFCIMGKSGSGKDTILKEINKVEDLNLKTIVTYTTRPKRNNETDGVEYFFIDKEKLDDFNREGKIIECRVYDTVHGK WYYLTVDDGQINLEENNYIVIVTLEAYSEFRKYFGDEKLVPLYIDLDDGVRLERALKREREQKSPNYNEMCRRFLADNED FSEDKLLNNNIIKKYNNYNLEECISEICDVIRKTSK >Mature_195_residues GKIFCIMGKSGSGKDTILKEINKVEDLNLKTIVTYTTRPKRNNETDGVEYFFIDKEKLDDFNREGKIIECRVYDTVHGKW YYLTVDDGQINLEENNYIVIVTLEAYSEFRKYFGDEKLVPLYIDLDDGVRLERALKREREQKSPNYNEMCRRFLADNEDF SEDKLLNNNIIKKYNNYNLEECISEICDVIRKTSK
Specific function: Unknown
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23209; Mature: 23077
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKIFCIMGKSGSGKDTILKEINKVEDLNLKTIVTYTTRPKRNNETDGVEYFFIDKEKLD CCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEHHHHH DFNREGKIIECRVYDTVHGKWYYLTVDDGQINLEENNYIVIVTLEAYSEFRKYFGDEKLV CCCCCCCEEEEEEEEEECCEEEEEEEECCEEEEECCCEEEEEEEHHHHHHHHHCCCCCEE PLYIDLDDGVRLERALKREREQKSPNYNEMCRRFLADNEDFSEDKLLNNNIIKKYNNYNL EEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCCCCH EECISEICDVIRKTSK HHHHHHHHHHHHHCCC >Mature Secondary Structure GKIFCIMGKSGSGKDTILKEINKVEDLNLKTIVTYTTRPKRNNETDGVEYFFIDKEKLD CEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCEEEEEEEHHHHH DFNREGKIIECRVYDTVHGKWYYLTVDDGQINLEENNYIVIVTLEAYSEFRKYFGDEKLV CCCCCCCEEEEEEEEEECCEEEEEEEECCEEEEECCCEEEEEEEHHHHHHHHHCCCCCEE PLYIDLDDGVRLERALKREREQKSPNYNEMCRRFLADNEDFSEDKLLNNNIIKKYNNYNL EEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCCCCH EECISEICDVIRKTSK HHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA