| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is yaaQ [H]
Identifier: 18311432
GI number: 18311432
Start: 2797648
End: 2797977
Strand: Reverse
Name: yaaQ [H]
Synonym: CPE2450
Alternate gene names: 18311432
Gene position: 2797977-2797648 (Counterclockwise)
Preceding gene: 18311433
Following gene: 18311431
Centisome position: 92.3
GC content: 31.52
Gene sequence:
>330_bases ATGAAATTAGTAATATCTATAGTTCAAGATGATGATGCTTTAGATTTAGTTGATGCGTTAAATGAGAAAGGTTATAGTGT AACTAAATTAGCTACAACAGGTGGATTTTTAAAATCAGGAAATACTACACTTTTAGCTGGGGTTCAAAAAGAAAAGGTTG ATGATGTTATAAGTATAATAAAAGATATATGCCAAACAAGAAAGGGCGTTGTAAGTTCATCTGCAAGTGTTTCAGAACCA GGTGGAGTGTATATACCATATCCTATGGAAGTGCAGGTTGGAGGAGCTACAATATTTGTTGTTGATGTAGATAAATTTAT AAAGATTTAA
Upstream 100 bases:
>100_bases TTAAAGCAATAATAAGGTTTGGTTAAGGGTTGTAAATAATGATATAATTATTTAAAACATAAATTTGAATTTTAGGGTAG AGATGTGAGGAGGACGTGTT
Downstream 100 bases:
>100_bases AATAGAAAGGAAAGTGCATAAATGATAGGTCACAATAAAGTTAGAGATAGATTTAGTAAAAGTGTAAGTAAAAATGCACT TTCCCATGCTCATTTAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKLVISIVQDDDALDLVDALNEKGYSVTKLATTGGFLKSGNTTLLAGVQKEKVDDVISIIKDICQTRKGVVSSSASVSEP GGVYIPYPMEVQVGGATIFVVDVDKFIKI
Sequences:
>Translated_109_residues MKLVISIVQDDDALDLVDALNEKGYSVTKLATTGGFLKSGNTTLLAGVQKEKVDDVISIIKDICQTRKGVVSSSASVSEP GGVYIPYPMEVQVGGATIFVVDVDKFIKI >Mature_109_residues MKLVISIVQDDDALDLVDALNEKGYSVTKLATTGGFLKSGNTTLLAGVQKEKVDDVISIIKDICQTRKGVVSSSASVSEP GGVYIPYPMEVQVGGATIFVVDVDKFIKI
Specific function: Unknown
COG id: COG3870
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010375 - InterPro: IPR011322 [H]
Pfam domain/function: PF06153 DUF970 [H]
EC number: NA
Molecular weight: Translated: 11563; Mature: 11563
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLVISIVQDDDALDLVDALNEKGYSVTKLATTGGFLKSGNTTLLAGVQKEKVDDVISII CEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEECCCHHHHHHHHHHH KDICQTRKGVVSSSASVSEPGGVYIPYPMEVQVGGATIFVVDVDKFIKI HHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEECCEEEEEEEHHHHHCC >Mature Secondary Structure MKLVISIVQDDDALDLVDALNEKGYSVTKLATTGGFLKSGNTTLLAGVQKEKVDDVISII CEEEEEEECCCCHHHHHHHHCCCCCEEEEEECCCCEEECCCEEEEECCCHHHHHHHHHHH KDICQTRKGVVSSSASVSEPGGVYIPYPMEVQVGGATIFVVDVDKFIKI HHHHHHHHCCCCCCCCCCCCCCEEECCCCEEEECCEEEEEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]