Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

Click here to switch to the map view.

The map label for this gene is yaaT [H]

Identifier: 18311430

GI number: 18311430

Start: 2795795

End: 2796700

Strand: Reverse

Name: yaaT [H]

Synonym: CPE2448

Alternate gene names: 18311430

Gene position: 2796700-2795795 (Counterclockwise)

Preceding gene: 18311431

Following gene: 18311429

Centisome position: 92.26

GC content: 30.35

Gene sequence:

>906_bases
ATGATAGAAGTAATAGGAGTCAGATTTAAAAAAGCTGGTAAAATATATTACTTTGGTCCTAATGGTATAGAGATAAAGAA
GGGTCAAAACGTAATTGTTGAAACTGCTAGAGGTATTGAATTTGGAGAATGTGTAATTGGTATAAGAAAAATTAGTGAAG
AGGATATCGTTGCACCATTAAAATCTGTATTAAGATTAGCTACAGAGGAAGATATAAATAAGCATAAGGAGAATAAAGCT
AAAGAGACAGAGGCTTTTGAAATATGCTTAAAGAAGATAGAAGAACATAATTTAGTAATGAAACTAATAGATGTAGAATA
TACATTTGATAATAATAAGGTTATATTCTACTTTACTGCAGAGGGTAGAGTTGACTTTAGAGAATTAGTAAAAGATTTAG
CAACTATATTTAAGACAAGAATAGAGCTTAGACAAATAGGGGTTAGAGATGAGGCTAAAATGATAGGTGGACTTGGACCA
TGTGGAAGACCTCTTTGTTGCTCTACATTCTTAGGAGACTTTGCTTCAGTTTCAATAAAAATGGCTAAGGAACAAAGTTT
ATCACTAAATCCAACTAAGATATCAGGAATATGTGGAAGACTTATGTGTTGTTTAAATTATGAGCAAAGCACATATGAAG
AAATAAGAAAAGAACTTCCTAGAGTAGGATCTGTAGTTGAGACTGAACTTGGAAAAGGTGAAGTAGTAGGTAACAACGTA
TTAAAGGAATTAGTAAGAGTTAAATTACCAAGAAAAAATGAAGAGATTATACAGGATTTTAAAATGTATGATGTAAAATT
AATCTCAGGTAGCTATGAAGGTGAAGTAGAGGATACAAACATTAGATTAGAAATTACTGATGAAGCGGATAAAGCATTAA
TTAAAAATCTAATAAAAGATAATTAA

Upstream 100 bases:

>100_bases
TAATAAAAGTAGTTAATGAGGCCAGAAATAATTTAAAAAGTAATACTAATTTATGGCTAACTTTAGATAGTATGCTGATT
AGTATATTGGAGGAATAAAA

Downstream 100 bases:

>100_bases
AATTAAATTTTTAATACGGTATAGGGGTATTCTTTAGCATGTTAATTCTAATTTTACTAGAATAGGCTAAATATGCTTAA
AAGAGATATTAAATACTTTA

Product: PSP1 domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MIEVIGVRFKKAGKIYYFGPNGIEIKKGQNVIVETARGIEFGECVIGIRKISEEDIVAPLKSVLRLATEEDINKHKENKA
KETEAFEICLKKIEEHNLVMKLIDVEYTFDNNKVIFYFTAEGRVDFRELVKDLATIFKTRIELRQIGVRDEAKMIGGLGP
CGRPLCCSTFLGDFASVSIKMAKEQSLSLNPTKISGICGRLMCCLNYEQSTYEEIRKELPRVGSVVETELGKGEVVGNNV
LKELVRVKLPRKNEEIIQDFKMYDVKLISGSYEGEVEDTNIRLEITDEADKALIKNLIKDN

Sequences:

>Translated_301_residues
MIEVIGVRFKKAGKIYYFGPNGIEIKKGQNVIVETARGIEFGECVIGIRKISEEDIVAPLKSVLRLATEEDINKHKENKA
KETEAFEICLKKIEEHNLVMKLIDVEYTFDNNKVIFYFTAEGRVDFRELVKDLATIFKTRIELRQIGVRDEAKMIGGLGP
CGRPLCCSTFLGDFASVSIKMAKEQSLSLNPTKISGICGRLMCCLNYEQSTYEEIRKELPRVGSVVETELGKGEVVGNNV
LKELVRVKLPRKNEEIIQDFKMYDVKLISGSYEGEVEDTNIRLEITDEADKALIKNLIKDN
>Mature_301_residues
MIEVIGVRFKKAGKIYYFGPNGIEIKKGQNVIVETARGIEFGECVIGIRKISEEDIVAPLKSVLRLATEEDINKHKENKA
KETEAFEICLKKIEEHNLVMKLIDVEYTFDNNKVIFYFTAEGRVDFRELVKDLATIFKTRIELRQIGVRDEAKMIGGLGP
CGRPLCCSTFLGDFASVSIKMAKEQSLSLNPTKISGICGRLMCCLNYEQSTYEEIRKELPRVGSVVETELGKGEVVGNNV
LKELVRVKLPRKNEEIIQDFKMYDVKLISGSYEGEVEDTNIRLEITDEADKALIKNLIKDN

Specific function: Essential for the phosphorelay during initiation of sporulation. May control the level of phosphorylated spo0A through spo0E activity during sporulation [H]

COG id: COG1774

COG function: function code S; Uncharacterized homolog of PSP1

Gene ontology:

Cell location: Cytoplasm. Note=In the vegetative phase, localized throughout the periphery of the cell and the division septum. In the sporulation stages, fluorescence of the yaaT-GFP fusion protein was observed as two dots at the sides of an asymmetric septum and at th

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PSP1 C-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007557 [H]

Pfam domain/function: PF04468 PSP1 [H]

EC number: NA

Molecular weight: Translated: 34052; Mature: 34052

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVIGVRFKKAGKIYYFGPNGIEIKKGQNVIVETARGIEFGECVIGIRKISEEDIVAPL
CEEEEEEEEECCCEEEEECCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH
KSVLRLATEEDINKHKENKAKETEAFEICLKKIEEHNLVMKLIDVEYTFDNNKVIFYFTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEC
EGRVDFRELVKDLATIFKTRIELRQIGVRDEAKMIGGLGPCGRPLCCSTFLGDFASVSIK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHCCHHHEEEE
MAKEQSLSLNPTKISGICGRLMCCLNYEQSTYEEIRKELPRVGSVVETELGKGEVVGNNV
EECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCCEEHHHH
LKELVRVKLPRKNEEIIQDFKMYDVKLISGSYEGEVEDTNIRLEITDEADKALIKNLIKD
HHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCCCCEECCEEEEEECCHHHHHHHHHHHCC
N
C
>Mature Secondary Structure
MIEVIGVRFKKAGKIYYFGPNGIEIKKGQNVIVETARGIEFGECVIGIRKISEEDIVAPL
CEEEEEEEEECCCEEEEECCCCEEEECCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHH
KSVLRLATEEDINKHKENKAKETEAFEICLKKIEEHNLVMKLIDVEYTFDNNKVIFYFTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEEEEEEC
EGRVDFRELVKDLATIFKTRIELRQIGVRDEAKMIGGLGPCGRPLCCSTFLGDFASVSIK
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHCCHHHEEEE
MAKEQSLSLNPTKISGICGRLMCCLNYEQSTYEEIRKELPRVGSVVETELGKGEVVGNNV
EECCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHCCCCCCEEHHHH
LKELVRVKLPRKNEEIIQDFKMYDVKLISGSYEGEVEDTNIRLEITDEADKALIKNLIKD
HHHHHHHCCCCCCHHHHHHHHHHEEEEECCCCCCCEECCEEEEEECCHHHHHHHHHHHCC
N
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]