Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is rfaG [C]

Identifier: 18311205

GI number: 18311205

Start: 2545323

End: 2546468

Strand: Direct

Name: rfaG [C]

Synonym: CPE2223

Alternate gene names: 18311205

Gene position: 2545323-2546468 (Clockwise)

Preceding gene: 18311201

Following gene: 18311208

Centisome position: 83.96

GC content: 29.06

Gene sequence:

>1146_bases
ATGTATAACTTAATAGATGCAAGAGGTGCAACTTGGTATAGAGGGACAGGTATAGGAACATACACATATAACCTATTAAC
AAACATATTAAAATTAGATAAGGATTCATCTTATGATTTATTATGCTCTGGAGAAAAAATACCTGAGTTTGAAAGTGAAA
ATACTAAAATAATAATGTCTTCTAGAAAACATCAACGTTTTTTTGAAGATTACTATATACCATCCTATGGAATAAAAGAG
GATATAGATTTGCTTCACCTTCCTCAAAATGGACTTGGACTTTCCTCTGAAGGAAACTTTGCAAAATTGGTTACTATTCA
TGACTTAATTCCTTACATTTTACCTGAAACCGTTGGTAAAGGTTACTTAAAAAAATTTCTTCAAAGTATGCCTGAAATAA
TTGATAATTCAACAGGAATAATCACTGTATCAGAATACTCTAAAAGTGATATTCTAAGATTTTTTCCACACTTTCCTGCT
GAAAATATTTTTGTAACTCCACTGGCAGCTAATGAAAATTATAAACCTTTAGATAAGGAAAAATGCCTATTTGATGTTAA
TAAGAGATTTGATTTTAATGGACCATTTATTATGTATATAGGTGGCTTTAGCTTAAGAAAGAATGTTAAGGGACTAGTTG
ATGCCTTTAACAATATTCATAAAAATATTGATGAAAATTATAAACTTTTAATTGTAGGTGGATTAAGAGACGAGGGATTA
AAATTAAAGGCCTATACTGAAAGTTTACCTATAAAAGATAAGGTTATTTTCACCGGATTTATAGAGGATGAATATTTACC
AACCTTATATAACGCAACTACTCTCTTTGTTTATCCTTCTCTATATGAAGGTTTTGGTTTACCTCCTTTAGAAGCTATGA
GTTGTAAGACTGCCGTTTTAACCTCAAATATAACTTCTATTCCTGAAGTTGTTCCCTTTAAAGAAAGCTTAGTTGATCCA
AATAACCCTAAGGAATTATCTTCAAAACTAGAAAATCTATTAAATGATTCAAAACTTAGAAATAATTTAGAAGATATATG
TTTTGAAAGAAGCAAAGAATTTACTTGGGAAAAAACAGCAAAGAAAACCTTAGAGGTATATAAAAAGGTAGTAGAAATCT
CTAAAAACTCATTAATAAAAGCATAA

Upstream 100 bases:

>100_bases
TAGTATATGTTCCTTAAATTCTTCTTGTTACATGCACATTTTATATTATTTATTAATATTATTAATTATAATGATTATTT
TTCTAAGGAGTGGAATCTTA

Downstream 100 bases:

>100_bases
AAATTTATTTTTTCAAAAATTATAGTTAATAAATAAAACTTATAAATATATTAGGAGAATTAATGAATTTTAACTAAAAG
TCTAAAGTTTAATTTAAAAC

Product: mannosyltransferase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MYNLIDARGATWYRGTGIGTYTYNLLTNILKLDKDSSYDLLCSGEKIPEFESENTKIIMSSRKHQRFFEDYYIPSYGIKE
DIDLLHLPQNGLGLSSEGNFAKLVTIHDLIPYILPETVGKGYLKKFLQSMPEIIDNSTGIITVSEYSKSDILRFFPHFPA
ENIFVTPLAANENYKPLDKEKCLFDVNKRFDFNGPFIMYIGGFSLRKNVKGLVDAFNNIHKNIDENYKLLIVGGLRDEGL
KLKAYTESLPIKDKVIFTGFIEDEYLPTLYNATTLFVYPSLYEGFGLPPLEAMSCKTAVLTSNITSIPEVVPFKESLVDP
NNPKELSSKLENLLNDSKLRNNLEDICFERSKEFTWEKTAKKTLEVYKKVVEISKNSLIKA

Sequences:

>Translated_381_residues
MYNLIDARGATWYRGTGIGTYTYNLLTNILKLDKDSSYDLLCSGEKIPEFESENTKIIMSSRKHQRFFEDYYIPSYGIKE
DIDLLHLPQNGLGLSSEGNFAKLVTIHDLIPYILPETVGKGYLKKFLQSMPEIIDNSTGIITVSEYSKSDILRFFPHFPA
ENIFVTPLAANENYKPLDKEKCLFDVNKRFDFNGPFIMYIGGFSLRKNVKGLVDAFNNIHKNIDENYKLLIVGGLRDEGL
KLKAYTESLPIKDKVIFTGFIEDEYLPTLYNATTLFVYPSLYEGFGLPPLEAMSCKTAVLTSNITSIPEVVPFKESLVDP
NNPKELSSKLENLLNDSKLRNNLEDICFERSKEFTWEKTAKKTLEVYKKVVEISKNSLIKA
>Mature_381_residues
MYNLIDARGATWYRGTGIGTYTYNLLTNILKLDKDSSYDLLCSGEKIPEFESENTKIIMSSRKHQRFFEDYYIPSYGIKE
DIDLLHLPQNGLGLSSEGNFAKLVTIHDLIPYILPETVGKGYLKKFLQSMPEIIDNSTGIITVSEYSKSDILRFFPHFPA
ENIFVTPLAANENYKPLDKEKCLFDVNKRFDFNGPFIMYIGGFSLRKNVKGLVDAFNNIHKNIDENYKLLIVGGLRDEGL
KLKAYTESLPIKDKVIFTGFIEDEYLPTLYNATTLFVYPSLYEGFGLPPLEAMSCKTAVLTSNITSIPEVVPFKESLVDP
NNPKELSSKLENLLNDSKLRNNLEDICFERSKEFTWEKTAKKTLEVYKKVVEISKNSLIKA

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 43446; Mature: 43446

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYNLIDARGATWYRGTGIGTYTYNLLTNILKLDKDSSYDLLCSGEKIPEFESENTKIIMS
CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEC
SRKHQRFFEDYYIPSYGIKEDIDLLHLPQNGLGLSSEGNFAKLVTIHDLIPYILPETVGK
CCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCH
GYLKKFLQSMPEIIDNSTGIITVSEYSKSDILRFFPHFPAENIFVTPLAANENYKPLDKE
HHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCHH
KCLFDVNKRFDFNGPFIMYIGGFSLRKNVKGLVDAFNNIHKNIDENYKLLIVGGLRDEGL
HHHEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCE
KLKAYTESLPIKDKVIFTGFIEDEYLPTLYNATTLFVYPSLYEGFGLPPLEAMSCKTAVL
EEEEECCCCCCCCEEEEEEEECCCCCCHHHCCEEEEEECHHHCCCCCCCHHHHCCHHHHH
TSNITSIPEVVPFKESLVDPNNPKELSSKLENLLNDSKLRNNLEDICFERSKEFTWEKTA
HCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KKTLEVYKKVVEISKNSLIKA
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MYNLIDARGATWYRGTGIGTYTYNLLTNILKLDKDSSYDLLCSGEKIPEFESENTKIIMS
CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEC
SRKHQRFFEDYYIPSYGIKEDIDLLHLPQNGLGLSSEGNFAKLVTIHDLIPYILPETVGK
CCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCH
GYLKKFLQSMPEIIDNSTGIITVSEYSKSDILRFFPHFPAENIFVTPLAANENYKPLDKE
HHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCHH
KCLFDVNKRFDFNGPFIMYIGGFSLRKNVKGLVDAFNNIHKNIDENYKLLIVGGLRDEGL
HHHEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCE
KLKAYTESLPIKDKVIFTGFIEDEYLPTLYNATTLFVYPSLYEGFGLPPLEAMSCKTAVL
EEEEECCCCCCCCEEEEEEEECCCCCCHHHCCEEEEEECHHHCCCCCCCHHHHCCHHHHH
TSNITSIPEVVPFKESLVDPNNPKELSSKLENLLNDSKLRNNLEDICFERSKEFTWEKTA
HCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KKTLEVYKKVVEISKNSLIKA
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]