| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is rfaG [C]
Identifier: 18311205
GI number: 18311205
Start: 2545323
End: 2546468
Strand: Direct
Name: rfaG [C]
Synonym: CPE2223
Alternate gene names: 18311205
Gene position: 2545323-2546468 (Clockwise)
Preceding gene: 18311201
Following gene: 18311208
Centisome position: 83.96
GC content: 29.06
Gene sequence:
>1146_bases ATGTATAACTTAATAGATGCAAGAGGTGCAACTTGGTATAGAGGGACAGGTATAGGAACATACACATATAACCTATTAAC AAACATATTAAAATTAGATAAGGATTCATCTTATGATTTATTATGCTCTGGAGAAAAAATACCTGAGTTTGAAAGTGAAA ATACTAAAATAATAATGTCTTCTAGAAAACATCAACGTTTTTTTGAAGATTACTATATACCATCCTATGGAATAAAAGAG GATATAGATTTGCTTCACCTTCCTCAAAATGGACTTGGACTTTCCTCTGAAGGAAACTTTGCAAAATTGGTTACTATTCA TGACTTAATTCCTTACATTTTACCTGAAACCGTTGGTAAAGGTTACTTAAAAAAATTTCTTCAAAGTATGCCTGAAATAA TTGATAATTCAACAGGAATAATCACTGTATCAGAATACTCTAAAAGTGATATTCTAAGATTTTTTCCACACTTTCCTGCT GAAAATATTTTTGTAACTCCACTGGCAGCTAATGAAAATTATAAACCTTTAGATAAGGAAAAATGCCTATTTGATGTTAA TAAGAGATTTGATTTTAATGGACCATTTATTATGTATATAGGTGGCTTTAGCTTAAGAAAGAATGTTAAGGGACTAGTTG ATGCCTTTAACAATATTCATAAAAATATTGATGAAAATTATAAACTTTTAATTGTAGGTGGATTAAGAGACGAGGGATTA AAATTAAAGGCCTATACTGAAAGTTTACCTATAAAAGATAAGGTTATTTTCACCGGATTTATAGAGGATGAATATTTACC AACCTTATATAACGCAACTACTCTCTTTGTTTATCCTTCTCTATATGAAGGTTTTGGTTTACCTCCTTTAGAAGCTATGA GTTGTAAGACTGCCGTTTTAACCTCAAATATAACTTCTATTCCTGAAGTTGTTCCCTTTAAAGAAAGCTTAGTTGATCCA AATAACCCTAAGGAATTATCTTCAAAACTAGAAAATCTATTAAATGATTCAAAACTTAGAAATAATTTAGAAGATATATG TTTTGAAAGAAGCAAAGAATTTACTTGGGAAAAAACAGCAAAGAAAACCTTAGAGGTATATAAAAAGGTAGTAGAAATCT CTAAAAACTCATTAATAAAAGCATAA
Upstream 100 bases:
>100_bases TAGTATATGTTCCTTAAATTCTTCTTGTTACATGCACATTTTATATTATTTATTAATATTATTAATTATAATGATTATTT TTCTAAGGAGTGGAATCTTA
Downstream 100 bases:
>100_bases AAATTTATTTTTTCAAAAATTATAGTTAATAAATAAAACTTATAAATATATTAGGAGAATTAATGAATTTTAACTAAAAG TCTAAAGTTTAATTTAAAAC
Product: mannosyltransferase B
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MYNLIDARGATWYRGTGIGTYTYNLLTNILKLDKDSSYDLLCSGEKIPEFESENTKIIMSSRKHQRFFEDYYIPSYGIKE DIDLLHLPQNGLGLSSEGNFAKLVTIHDLIPYILPETVGKGYLKKFLQSMPEIIDNSTGIITVSEYSKSDILRFFPHFPA ENIFVTPLAANENYKPLDKEKCLFDVNKRFDFNGPFIMYIGGFSLRKNVKGLVDAFNNIHKNIDENYKLLIVGGLRDEGL KLKAYTESLPIKDKVIFTGFIEDEYLPTLYNATTLFVYPSLYEGFGLPPLEAMSCKTAVLTSNITSIPEVVPFKESLVDP NNPKELSSKLENLLNDSKLRNNLEDICFERSKEFTWEKTAKKTLEVYKKVVEISKNSLIKA
Sequences:
>Translated_381_residues MYNLIDARGATWYRGTGIGTYTYNLLTNILKLDKDSSYDLLCSGEKIPEFESENTKIIMSSRKHQRFFEDYYIPSYGIKE DIDLLHLPQNGLGLSSEGNFAKLVTIHDLIPYILPETVGKGYLKKFLQSMPEIIDNSTGIITVSEYSKSDILRFFPHFPA ENIFVTPLAANENYKPLDKEKCLFDVNKRFDFNGPFIMYIGGFSLRKNVKGLVDAFNNIHKNIDENYKLLIVGGLRDEGL KLKAYTESLPIKDKVIFTGFIEDEYLPTLYNATTLFVYPSLYEGFGLPPLEAMSCKTAVLTSNITSIPEVVPFKESLVDP NNPKELSSKLENLLNDSKLRNNLEDICFERSKEFTWEKTAKKTLEVYKKVVEISKNSLIKA >Mature_381_residues MYNLIDARGATWYRGTGIGTYTYNLLTNILKLDKDSSYDLLCSGEKIPEFESENTKIIMSSRKHQRFFEDYYIPSYGIKE DIDLLHLPQNGLGLSSEGNFAKLVTIHDLIPYILPETVGKGYLKKFLQSMPEIIDNSTGIITVSEYSKSDILRFFPHFPA ENIFVTPLAANENYKPLDKEKCLFDVNKRFDFNGPFIMYIGGFSLRKNVKGLVDAFNNIHKNIDENYKLLIVGGLRDEGL KLKAYTESLPIKDKVIFTGFIEDEYLPTLYNATTLFVYPSLYEGFGLPPLEAMSCKTAVLTSNITSIPEVVPFKESLVDP NNPKELSSKLENLLNDSKLRNNLEDICFERSKEFTWEKTAKKTLEVYKKVVEISKNSLIKA
Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 43446; Mature: 43446
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNLIDARGATWYRGTGIGTYTYNLLTNILKLDKDSSYDLLCSGEKIPEFESENTKIIMS CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEC SRKHQRFFEDYYIPSYGIKEDIDLLHLPQNGLGLSSEGNFAKLVTIHDLIPYILPETVGK CCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCH GYLKKFLQSMPEIIDNSTGIITVSEYSKSDILRFFPHFPAENIFVTPLAANENYKPLDKE HHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCHH KCLFDVNKRFDFNGPFIMYIGGFSLRKNVKGLVDAFNNIHKNIDENYKLLIVGGLRDEGL HHHEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCE KLKAYTESLPIKDKVIFTGFIEDEYLPTLYNATTLFVYPSLYEGFGLPPLEAMSCKTAVL EEEEECCCCCCCCEEEEEEEECCCCCCHHHCCEEEEEECHHHCCCCCCCHHHHCCHHHHH TSNITSIPEVVPFKESLVDPNNPKELSSKLENLLNDSKLRNNLEDICFERSKEFTWEKTA HCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KKTLEVYKKVVEISKNSLIKA HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYNLIDARGATWYRGTGIGTYTYNLLTNILKLDKDSSYDLLCSGEKIPEFESENTKIIMS CCCCCCCCCCCEEECCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEC SRKHQRFFEDYYIPSYGIKEDIDLLHLPQNGLGLSSEGNFAKLVTIHDLIPYILPETVGK CCHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHCCH GYLKKFLQSMPEIIDNSTGIITVSEYSKSDILRFFPHFPAENIFVTPLAANENYKPLDKE HHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHCCCCCCCCEEEEEEECCCCCCCCCHH KCLFDVNKRFDFNGPFIMYIGGFSLRKNVKGLVDAFNNIHKNIDENYKLLIVGGLRDEGL HHHEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCE KLKAYTESLPIKDKVIFTGFIEDEYLPTLYNATTLFVYPSLYEGFGLPPLEAMSCKTAVL EEEEECCCCCCCCEEEEEEEECCCCCCHHHCCEEEEEECHHHCCCCCCCHHHHCCHHHHH TSNITSIPEVVPFKESLVDPNNPKELSSKLENLLNDSKLRNNLEDICFERSKEFTWEKTA HCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH KKTLEVYKKVVEISKNSLIKA HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Glycosyltransferases; Hexosyltransferases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]