| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is tpp15 [H]
Identifier: 18311208
GI number: 18311208
Start: 2547937
End: 2548380
Strand: Direct
Name: tpp15 [H]
Synonym: CPE2226
Alternate gene names: 18311208
Gene position: 2547937-2548380 (Clockwise)
Preceding gene: 18311205
Following gene: 18311209
Centisome position: 84.05
GC content: 30.63
Gene sequence:
>444_bases ATGAAAAAGAAATTTTTTGCTCTTATATTATCTACTTTAGTAGCTTCTAACTTTATTGCTTGTGGAGCTTCAAACAACTC TAAATTAAAAGATGGGGACTATACTGTAGAAACTGCTAAGGCTGATGACCATGGCTATAAGGCTAAACTAAGTATAAAAG TTTCAGATGGTAAAATAACTGAAGCAAAATATAATGAATTTAATGGTGAAACTAATGCTATGAAACGTGAAGATAAAGAT TATAATGAAAAAATGACAGGAGTTTCAGGAATTGGACCTGCTGAATATGAACCTCAACTTGAAAAAGCCTTAATAGAAAA ACAATCTTCTGACATAGATGTTATTACAGGAGCAACAAGTTCTTCTAATCAATTCAAAAAATTAGCTGAGAAAGTATTAA AGAATGCTGAAGAAGGAAAAACTGAAGCAACTTTAGTAGACTAA
Upstream 100 bases:
>100_bases ATGATTTTAAAGTTAAAATTATTTGTTTTATTACTCTTTAAGGAATTTTTTTAATATTAAAAAGTATATTTATAGTAACA AAATTATTTAGGAGGAATTT
Downstream 100 bases:
>100_bases GTAAAACATATTATCTTATTTCTAGGAGGGTAAAATGGAGAACTTAAGACATATTTGTATTTTTCTATGTATGATTTTAA CTTTCACTTTAAATGGATGC
Product: hypothetical protein
Products: NA
Alternate protein names: Major membrane immunogen [H]
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKKKFFALILSTLVASNFIACGASNNSKLKDGDYTVETAKADDHGYKAKLSIKVSDGKITEAKYNEFNGETNAMKREDKD YNEKMTGVSGIGPAEYEPQLEKALIEKQSSDIDVITGATSSSNQFKKLAEKVLKNAEEGKTEATLVD
Sequences:
>Translated_147_residues MKKKFFALILSTLVASNFIACGASNNSKLKDGDYTVETAKADDHGYKAKLSIKVSDGKITEAKYNEFNGETNAMKREDKD YNEKMTGVSGIGPAEYEPQLEKALIEKQSSDIDVITGATSSSNQFKKLAEKVLKNAEEGKTEATLVD >Mature_147_residues MKKKFFALILSTLVASNFIACGASNNSKLKDGDYTVETAKADDHGYKAKLSIKVSDGKITEAKYNEFNGETNAMKREDKD YNEKMTGVSGIGPAEYEPQLEKALIEKQSSDIDVITGATSSSNQFKKLAEKVLKNAEEGKTEATLVD
Specific function: Unknown
COG id: COG4939
COG function: function code S; Major membrane immunogen, membrane-anchored lipoprotein
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007329 - InterPro: IPR017058 [H]
Pfam domain/function: PF04205 FMN_bind [H]
EC number: NA
Molecular weight: Translated: 16039; Mature: 16039
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKFFALILSTLVASNFIACGASNNSKLKDGDYTVETAKADDHGYKAKLSIKVSDGKIT CCHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCEEE EAKYNEFNGETNAMKREDKDYNEKMTGVSGIGPAEYEPQLEKALIEKQSSDIDVITGATS CCCCCCCCCCCCHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCC SSNQFKKLAEKVLKNAEEGKTEATLVD CHHHHHHHHHHHHCCHHCCCCCEEECC >Mature Secondary Structure MKKKFFALILSTLVASNFIACGASNNSKLKDGDYTVETAKADDHGYKAKLSIKVSDGKIT CCHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCEEEEECCCCCCCCEEEEEEEECCCEEE EAKYNEFNGETNAMKREDKDYNEKMTGVSGIGPAEYEPQLEKALIEKQSSDIDVITGATS CCCCCCCCCCCCHHCCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCC SSNQFKKLAEKVLKNAEEGKTEATLVD CHHHHHHHHHHHHCCHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2280688; 9332349; 9665876 [H]