Click here to switch to the map view.

The map label for this gene is rfbU [H]

Identifier: 18311201

GI number: 18311201

Start: 2541142

End: 2542269

Strand: Direct

Name: rfbU [H]

Synonym: CPE2219

Alternate gene names: 18311201

Gene position: 2541142-2542269 (Clockwise)

Preceding gene: 18311188

Following gene: 18311205

Centisome position: 83.83

GC content: 27.57

Gene sequence:

>1128_bases
ATGAAAATATGTATTGATGGAAGGGCAGCTACCTTATACCGTGGTACTGGAATTGGTAACTACACTTATCAAATAATAAA
TAATCTACACCAGATAGATTTTTTAAATGAATATAACATACTTACTCCAGAAGCATCCTCTCTAAAATTACCTAAAAAGA
ATAACTTTAATTATTTATCCTCAAGTACAAATGATAAGAAAAACTTTTGGGAATTTATAAATACAAAAAATCCTAAAGAA
AATATTATAGGTGATATATATCATATTCCTCAAAATGGTATAGGCTTTTCAAAACCTAATGATATAAAGACCGTAATTAC
CCTACATGATATTATCCCTATGAAAATGCCTGATACAGTTAGTGAAACCTTTTTAAAAATTTTTAATGAAAATATACAAA
ATATTTTAAATAACACAGATGGAATTATTACAGTTTCTAACTTTTCTAAAGAAGATATAAGTAAAACTTTTTCTTACCCA
AAGGAAAAAATATTTGTTACTCATTTGGCTGCTGAAGAAATATATACCCCATTAAATAAATTCCACTCATCTCAATATCT
AAAAAAACACTATGGTATAGATAGGGATTTTTTATTATATGTAGGTGGTTTTAGCCCTAGAAAAAATATTTTAGGACTTA
TTGAAGCCTTTAACTTAGTAAAAAATTCTTATAAAAGAGATTTAAAGCTTGTTATTATAGGAACTAAGGGACCTTCATAT
GAAATTTACAGAAAAAAAGTAGATGAGTTAAATTTATCTTCATCTGTTATTTTTACTGGATTTATTCCTATAAATGATAT
GCCTATATTCTATAGTGCTAGTAAAGCATTAGTTTATCCTTCTTTTTATGAAGGCTTTGGATTACCTCCTATAGAATGCA
TGGCCTGCGGAACCCCTGTAATAGCATCTAATTTAACCTCAATGCCTGAGGTATGCCAAGATGCTGCTCTTTTAGTTGAT
CCTTATGATGTTGATGAAATAAAGGAAAATATACTGACCTTATTAAATAACCATAAATTTTATTCCCTTATGATTTATAA
AGGGCTAAGTCATTCAAGTAAATTTAATTGGAAAAAAACTGCTTATAATACACTTGAGGTCTACAAACATATTTCTTCAC
AAATTTAA

Upstream 100 bases:

>100_bases
ACCCCCTACCATATTTATATGTAACAACCTCTTGTTTTATTAACATTTTATTCCATATATAAATATAATAATATATATTT
ATACTGAAAGGACATATGCT

Downstream 100 bases:

>100_bases
AATATACTCTCTAAAATTTAGTTCTAATATGTCTTATAAAAAAATTTATTATTTTAAAATGAAAAGGTACTGTATAAAAA
TTTAAACATAAAACTTATAA

Product: mannosyltransferase B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MKICIDGRAATLYRGTGIGNYTYQIINNLHQIDFLNEYNILTPEASSLKLPKKNNFNYLSSSTNDKKNFWEFINTKNPKE
NIIGDIYHIPQNGIGFSKPNDIKTVITLHDIIPMKMPDTVSETFLKIFNENIQNILNNTDGIITVSNFSKEDISKTFSYP
KEKIFVTHLAAEEIYTPLNKFHSSQYLKKHYGIDRDFLLYVGGFSPRKNILGLIEAFNLVKNSYKRDLKLVIIGTKGPSY
EIYRKKVDELNLSSSVIFTGFIPINDMPIFYSASKALVYPSFYEGFGLPPIECMACGTPVIASNLTSMPEVCQDAALLVD
PYDVDEIKENILTLLNNHKFYSLMIYKGLSHSSKFNWKKTAYNTLEVYKHISSQI

Sequences:

>Translated_375_residues
MKICIDGRAATLYRGTGIGNYTYQIINNLHQIDFLNEYNILTPEASSLKLPKKNNFNYLSSSTNDKKNFWEFINTKNPKE
NIIGDIYHIPQNGIGFSKPNDIKTVITLHDIIPMKMPDTVSETFLKIFNENIQNILNNTDGIITVSNFSKEDISKTFSYP
KEKIFVTHLAAEEIYTPLNKFHSSQYLKKHYGIDRDFLLYVGGFSPRKNILGLIEAFNLVKNSYKRDLKLVIIGTKGPSY
EIYRKKVDELNLSSSVIFTGFIPINDMPIFYSASKALVYPSFYEGFGLPPIECMACGTPVIASNLTSMPEVCQDAALLVD
PYDVDEIKENILTLLNNHKFYSLMIYKGLSHSSKFNWKKTAYNTLEVYKHISSQI
>Mature_375_residues
MKICIDGRAATLYRGTGIGNYTYQIINNLHQIDFLNEYNILTPEASSLKLPKKNNFNYLSSSTNDKKNFWEFINTKNPKE
NIIGDIYHIPQNGIGFSKPNDIKTVITLHDIIPMKMPDTVSETFLKIFNENIQNILNNTDGIITVSNFSKEDISKTFSYP
KEKIFVTHLAAEEIYTPLNKFHSSQYLKKHYGIDRDFLLYVGGFSPRKNILGLIEAFNLVKNSYKRDLKLVIIGTKGPSY
EIYRKKVDELNLSSSVIFTGFIPINDMPIFYSASKALVYPSFYEGFGLPPIECMACGTPVIASNLTSMPEVCQDAALLVD
PYDVDEIKENILTLLNNHKFYSLMIYKGLSHSSKFNWKKTAYNTLEVYKHISSQI

Specific function: Involved In The Addition Of The First Glucose Residue To The Lipopolysaccharide Core. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 42783; Mature: 42783

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKICIDGRAATLYRGTGIGNYTYQIINNLHQIDFLNEYNILTPEASSLKLPKKNNFNYLS
CEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCC
SSTNDKKNFWEFINTKNPKENIIGDIYHIPQNGIGFSKPNDIKTVITLHDIIPMKMPDTV
CCCCCHHHHHHHHCCCCCHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEHHCCCCCCCHH
SETFLKIFNENIQNILNNTDGIITVSNFSKEDISKTFSYPKEKIFVTHLAAEEIYTPLNK
HHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH
FHSSQYLKKHYGIDRDFLLYVGGFSPRKNILGLIEAFNLVKNSYKRDLKLVIIGTKGPSY
HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCH
EIYRKKVDELNLSSSVIFTGFIPINDMPIFYSASKALVYPSFYEGFGLPPIECMACGTPV
HHHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCEEECCCHHHCCCCCCHHHHHCCCCH
IASNLTSMPEVCQDAALLVDPYDVDEIKENILTLLNNHKFYSLMIYKGLSHSSKFNWKKT
HHHHHCHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHH
AYNTLEVYKHISSQI
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MKICIDGRAATLYRGTGIGNYTYQIINNLHQIDFLNEYNILTPEASSLKLPKKNNFNYLS
CEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCC
SSTNDKKNFWEFINTKNPKENIIGDIYHIPQNGIGFSKPNDIKTVITLHDIIPMKMPDTV
CCCCCHHHHHHHHCCCCCHHHHCCCEEECCCCCCCCCCCCCCEEEEEEEHHCCCCCCCHH
SETFLKIFNENIQNILNNTDGIITVSNFSKEDISKTFSYPKEKIFVTHLAAEEIYTPLNK
HHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHH
FHSSQYLKKHYGIDRDFLLYVGGFSPRKNILGLIEAFNLVKNSYKRDLKLVIIGTKGPSY
HHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCH
EIYRKKVDELNLSSSVIFTGFIPINDMPIFYSASKALVYPSFYEGFGLPPIECMACGTPV
HHHHHHHHHCCCCCCEEEEEEEECCCCCEEEECCCEEECCCHHHCCCCCCHHHHHCCCCH
IASNLTSMPEVCQDAALLVDPYDVDEIKENILTLLNNHKFYSLMIYKGLSHSSKFNWKKT
HHHHHCHHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHH
AYNTLEVYKHISSQI
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]