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The map label for this gene is ydiB [H]

Identifier: 18311146

GI number: 18311146

Start: 2481679

End: 2482143

Strand: Direct

Name: ydiB [H]

Synonym: CPE2164

Alternate gene names: 18311146

Gene position: 2481679-2482143 (Clockwise)

Preceding gene: 18311131

Following gene: 18311147

Centisome position: 81.86

GC content: 29.25

Gene sequence:

>465_bases
ATGGAATTTATAGTAGATAGTGTAGATAAAACTATGCATATTGGAAGACAACTTGGTTCTCTTGTAAATAAAGGAGATAT
TCTTTGTTTGACTGGAGACTTAGGAACTGGCAAAACTCATATAAGTAAAGGAATTGCAGAAGGATTAGGAATTGACGAGC
ATATAACTAGTCCAACTTTTAATATAGTTAATGAATATCATAGCGGAAGATTAACTCTTTATCATTTTGATGTTTATAGA
GTTAATGATCCAGATGAAATTGAAGCAATTGGCTTTGATGAATATATCTTTGGGGATGGAGTAAGCTTAATTGAATGGGC
TAATTACATAGAAGAACTTATTCCTGAAGAGTATATACATATAAAAATAGAAAAATTACCTGATATGGGTGAAAATTTTA
GAAAAATAACTATTAATGGTTATGGTGATAGATATAACTACATAAAGGAGATAAAAGAATGTTAG

Upstream 100 bases:

>100_bases
TAATAAAACTTTAAATACCTTATTAAATCTACTCTCTCTTTTCTTTTTCTCTAAATTTGGATAGAATGATTAAAGAGTGT
TAATTTGAAAGGAGTTCTTT

Downstream 100 bases:

>100_bases
TATTAGCTATTGATTCATCTTCTAGCACAGCTACTTGCGCACTTGTTAGTGAAAAAGGAGTTCTAGGAGAAATAAACTTA
AATGATAAAAAACAACATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MEFIVDSVDKTMHIGRQLGSLVNKGDILCLTGDLGTGKTHISKGIAEGLGIDEHITSPTFNIVNEYHSGRLTLYHFDVYR
VNDPDEIEAIGFDEYIFGDGVSLIEWANYIEELIPEEYIHIKIEKLPDMGENFRKITINGYGDRYNYIKEIKEC

Sequences:

>Translated_154_residues
MEFIVDSVDKTMHIGRQLGSLVNKGDILCLTGDLGTGKTHISKGIAEGLGIDEHITSPTFNIVNEYHSGRLTLYHFDVYR
VNDPDEIEAIGFDEYIFGDGVSLIEWANYIEELIPEEYIHIKIEKLPDMGENFRKITINGYGDRYNYIKEIKEC
>Mature_154_residues
MEFIVDSVDKTMHIGRQLGSLVNKGDILCLTGDLGTGKTHISKGIAEGLGIDEHITSPTFNIVNEYHSGRLTLYHFDVYR
VNDPDEIEAIGFDEYIFGDGVSLIEWANYIEELIPEEYIHIKIEKLPDMGENFRKITINGYGDRYNYIKEIKEC

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=115, Percent_Identity=33.9130434782609, Blast_Score=89, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17562; Mature: 17562

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00146 BETA_LACTAMASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFIVDSVDKTMHIGRQLGSLVNKGDILCLTGDLGTGKTHISKGIAEGLGIDEHITSPTF
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHCCCCHH
NIVNEYHSGRLTLYHFDVYRVNDPDEIEAIGFDEYIFGDGVSLIEWANYIEELIPEEYIH
HHHHHHCCCEEEEEEEEEEECCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHCCCCEEE
IKIEKLPDMGENFRKITINGYGDRYNYIKEIKEC
EEEECCCCCCCCEEEEEEECCCCHHHHHHHHHCC
>Mature Secondary Structure
MEFIVDSVDKTMHIGRQLGSLVNKGDILCLTGDLGTGKTHISKGIAEGLGIDEHITSPTF
CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCHHCCCCHH
NIVNEYHSGRLTLYHFDVYRVNDPDEIEAIGFDEYIFGDGVSLIEWANYIEELIPEEYIH
HHHHHHCCCEEEEEEEEEEECCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHCCCCEEE
IKIEKLPDMGENFRKITINGYGDRYNYIKEIKEC
EEEECCCCCCCCEEEEEEECCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]