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The map label for this gene is ydiC [H]

Identifier: 18311147

GI number: 18311147

Start: 2482137

End: 2482841

Strand: Direct

Name: ydiC [H]

Synonym: CPE2165

Alternate gene names: 18311147

Gene position: 2482137-2482841 (Clockwise)

Preceding gene: 18311146

Following gene: 18311148

Centisome position: 81.88

GC content: 30.64

Gene sequence:

>705_bases
ATGTTAGTATTAGCTATTGATTCATCTTCTAGCACAGCTACTTGCGCACTTGTTAGTGAAAAAGGAGTTCTAGGAGAAAT
AAACTTAAATGATAAAAAACAACATTCCGTTTTATTAATGGACTTAATAGATGATTTACTTAAGTATAATAATCTAAAGA
TTAAGGATTTAGACGGATTTGCTATTAGTGAAGGTCCTGGTTCATTTACTGGACTTAGAATTGGTATGGCAACTGTTAAA
GGATTAAGTTTTGGAAGTAAAAAACCTTCTGTTTGCGTTTCTTCCCTTGATGCTTTAGCTTATAATATTTCAGGATTTAA
TGGAATAATCTGTCCTATTATAGATGCTCTTAGAGGAAATGTATATGCTTCTCTATATAAAAAAGAAGGAGAGAAGCTAC
TATCTCTTAGTGAAAAAGAATGCATTTCTTTAACTGACTTAATTGAAAAAATAAAAGAAAAAAATGAAGATGTTATATTT
GTGGGAGATGGAATAAGCAAACACAAAGAAGCTTTAGAAGAAGCTCTTCCTAATTGCTCTTTTGCACCTAGTCATTCATC
TTATCCAAGAGCAGCATCAGTTGGAGAATTAGGATTAAGATTATTAGAGTCAGGAGTTTCTCATGATTTAAATACATATG
CTCCTATATACTTAAGAAAATCTCAAGCTGAAAGAGAATATGAAGAAAGAATGAGATTAAAATAA

Upstream 100 bases:

>100_bases
ATATAAAAATAGAAAAATTACCTGATATGGGTGAAAATTTTAGAAAAATAACTATTAATGGTTATGGTGATAGATATAAC
TACATAAAGGAGATAAAAGA

Downstream 100 bases:

>100_bases
TGAATTCATATAAAATAGAACTTATGAATTCTTCCCATGTTAAGGGCGTTTTTGAAGTAAGTAAACTTAGTCTTGCAGAA
TCTTGGAATATAGATTCTAT

Product: glycoprotease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MLVLAIDSSSSTATCALVSEKGVLGEINLNDKKQHSVLLMDLIDDLLKYNNLKIKDLDGFAISEGPGSFTGLRIGMATVK
GLSFGSKKPSVCVSSLDALAYNISGFNGIICPIIDALRGNVYASLYKKEGEKLLSLSEKECISLTDLIEKIKEKNEDVIF
VGDGISKHKEALEEALPNCSFAPSHSSYPRAASVGELGLRLLESGVSHDLNTYAPIYLRKSQAEREYEERMRLK

Sequences:

>Translated_234_residues
MLVLAIDSSSSTATCALVSEKGVLGEINLNDKKQHSVLLMDLIDDLLKYNNLKIKDLDGFAISEGPGSFTGLRIGMATVK
GLSFGSKKPSVCVSSLDALAYNISGFNGIICPIIDALRGNVYASLYKKEGEKLLSLSEKECISLTDLIEKIKEKNEDVIF
VGDGISKHKEALEEALPNCSFAPSHSSYPRAASVGELGLRLLESGVSHDLNTYAPIYLRKSQAEREYEERMRLK
>Mature_234_residues
MLVLAIDSSSSTATCALVSEKGVLGEINLNDKKQHSVLLMDLIDDLLKYNNLKIKDLDGFAISEGPGSFTGLRIGMATVK
GLSFGSKKPSVCVSSLDALAYNISGFNGIICPIIDALRGNVYASLYKKEGEKLLSLSEKECISLTDLIEKIKEKNEDVIF
VGDGISKHKEALEEALPNCSFAPSHSSYPRAASVGELGLRLLESGVSHDLNTYAPIYLRKSQAEREYEERMRLK

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=229, Percent_Identity=24.4541484716157, Blast_Score=88, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 25492; Mature: 25492

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLAIDSSSSTATCALVSEKGVLGEINLNDKKQHSVLLMDLIDDLLKYNNLKIKDLDGF
CEEEEEECCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCE
AISEGPGSFTGLRIGMATVKGLSFGSKKPSVCVSSLDALAYNISGFNGIICPIIDALRGN
EEECCCCCCHHHEEHHHHHHCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCH
VYASLYKKEGEKLLSLSEKECISLTDLIEKIKEKNEDVIFVGDGISKHKEALEEALPNCS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCC
FAPSHSSYPRAASVGELGLRLLESGVSHDLNTYAPIYLRKSQAEREYEERMRLK
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCC
>Mature Secondary Structure
MLVLAIDSSSSTATCALVSEKGVLGEINLNDKKQHSVLLMDLIDDLLKYNNLKIKDLDGF
CEEEEEECCCCCEEEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCE
AISEGPGSFTGLRIGMATVKGLSFGSKKPSVCVSSLDALAYNISGFNGIICPIIDALRGN
EEECCCCCCHHHEEHHHHHHCCCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHCH
VYASLYKKEGEKLLSLSEKECISLTDLIEKIKEKNEDVIFVGDGISKHKEALEEALPNCS
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHCCCCC
FAPSHSSYPRAASVGELGLRLLESGVSHDLNTYAPIYLRKSQAEREYEERMRLK
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]