Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311145

Identifier: 18311145

GI number: 18311145

Start: 2480759

End: 2481379

Strand: Reverse

Name: 18311145

Synonym: CPE2163

Alternate gene names: NA

Gene position: 2481379-2480759 (Counterclockwise)

Preceding gene: 18311149

Following gene: 18311144

Centisome position: 81.86

GC content: 28.02

Gene sequence:

>621_bases
ATGTTAGTAAAAGCTATTATGACAAAGAAAGAAAATCTAGATTTAGTTGATTCTAATACTAAACTTAAAGATGCACTAAA
AATCATGGAGGATAATAAGTTTTTATCAATTCCTGTAGTAGATGGAGATAAGTTTAGGGGCGCAGTGGCTAAAAGCTCTA
TCTATAAATATTACTTTAAACATAATTTAAGCAAAGATGAAGTATTAAATAATATTACTGTAGGTGAGATATTAAAAACA
GAGGTTCCTATAATAAATAAATCAGAACATATAGAAAAGGCAGTATCCATGCTAGAAAGAATGAGAATTTCTTTTGTGGC
TGTTGTGGATGAATTTGATAATTTCAAAGGAATACTAACTCATAAGGCAGTTTTTAGAGAATTTAACAATGCTTTTGGAC
TTAATAAAGGGGAAAGAATAGTAATAAGATCTTATGATGTCCCAGGACAATTATCAAAAATAACTAAGACAATATCTGAA
GAAGGTGGAGATATATTAAGCATAGTTATTGTAGATACAAAGAGTTTAACTGATGTTAAAGAGGTTATAGTTAGGGTTAA
AAGCATAGATGTTGAAAATATTAAAAAGAAATTAAAAGAGTCAGGATTTAAATTAGCATAG

Upstream 100 bases:

>100_bases
TAATACTTTGATAAATTTAATATAATTGGATAACTATGTAATAATATAATAGTATAATAATAGTATATAGTATGTAAATT
TAGGAATTGGGGGGATTTGT

Downstream 100 bases:

>100_bases
TAAACTATTATAAACACATAAGTATAGAGCATATATAATATTGATTTTTTAAATTTATATTATATATGCTTTATTTTAAT
TGATGAAGATAATAGTGAAA

Product: CBS domain protein

Products: NA

Alternate protein names: CBS Domain Containing Protein; CBS Domain Protein; Cbs Domain Containing Membrane Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MLVKAIMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVDGDKFRGAVAKSSIYKYYFKHNLSKDEVLNNITVGEILKT
EVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILTHKAVFREFNNAFGLNKGERIVIRSYDVPGQLSKITKTISE
EGGDILSIVIVDTKSLTDVKEVIVRVKSIDVENIKKKLKESGFKLA

Sequences:

>Translated_206_residues
MLVKAIMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVDGDKFRGAVAKSSIYKYYFKHNLSKDEVLNNITVGEILKT
EVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILTHKAVFREFNNAFGLNKGERIVIRSYDVPGQLSKITKTISE
EGGDILSIVIVDTKSLTDVKEVIVRVKSIDVENIKKKLKESGFKLA
>Mature_206_residues
MLVKAIMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVDGDKFRGAVAKSSIYKYYFKHNLSKDEVLNNITVGEILKT
EVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILTHKAVFREFNNAFGLNKGERIVIRSYDVPGQLSKITKTISE
EGGDILSIVIVDTKSLTDVKEVIVRVKSIDVENIKKKLKESGFKLA

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23265; Mature: 23265

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVKAIMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVDGDKFRGAVAKSSIYKYYFK
CCHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
HNLSKDEVLNNITVGEILKTEVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILT
CCCCHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HKAVFREFNNAFGLNKGERIVIRSYDVPGQLSKITKTISEEGGDILSIVIVDTKSLTDVK
HHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH
EVIVRVKSIDVENIKKKLKESGFKLA
HHHHHHHCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLVKAIMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVDGDKFRGAVAKSSIYKYYFK
CCHHHHHCCCCCCCEECCCCHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
HNLSKDEVLNNITVGEILKTEVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILT
CCCCHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
HKAVFREFNNAFGLNKGERIVIRSYDVPGQLSKITKTISEEGGDILSIVIVDTKSLTDVK
HHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH
EVIVRVKSIDVENIKKKLKESGFKLA
HHHHHHHCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA