| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
Click here to switch to the map view.
The map label for this gene is znuA [C]
Identifier: 18311140
GI number: 18311140
Start: 2472360
End: 2473256
Strand: Reverse
Name: znuA [C]
Synonym: CPE2158
Alternate gene names: 18311140
Gene position: 2473256-2472360 (Counterclockwise)
Preceding gene: 18311141
Following gene: 18311139
Centisome position: 81.59
GC content: 29.88
Gene sequence:
>897_bases ATGAGAAAGAAATTAGTATCGATTTTTTTAGGAGTAACAATGGCTGCTTTTTTTGTTGGGTGTCAAAGTACTAAAACAGC AGAAAATAAAAAGGATAACGGTAAGGTTGATGTCACTGTAAGTATTGAACCTTTAAGAGAGTTTACTGAAATAGTTGGTG GAGATAAGGTAAATGTTAAGACTATGGTTCCAAATGGAACAGAGCCACATGATTTTGAACCAAAAACTCAAGATTTATTA GAGTTAAATAAGGCTAAGGTTTTTGTTTATAATGGATTAGGTATGGAACACTGGAAAGAGCAAGTTCTTAATACAATAGA AAATAAAGATGTAAAAGTGGTTGAAGCTTCTAAAGGGGCTGAAGTATTAAAAGAAGGAGATAAGGTAGATCCTCATCTTT GGTTAAGCTTAGATGGAGCTAAAATAGAAGCTCAAAACATAAAAGATGCTTTAGTTGAGGTTGATTCAGATAATAAAAGT TATTACGAAGAAAACTTTAAAAAGTTTGCAGAGAAATTAGATTCTTTAGCAAATGAGTACAAAGAAAAGTTTAATGGATT AGCTAATAAGGATTTTGTTACTGGTCATGCTGCTTTTGGATACTTATGTAGAGAATTTGGATTAAAACAAGTTAGTGTAG AAAACTTATTTGGAGAAGGAGAAATAACTCCTCAAAAAATGCAAGAGATAGTTGAGTTCTGTAAGAAAAATGATATAAAA ACAATTTTTATGCCTGAGTTAGCAAGTGAAAAAATTTCTCAAACTTTAGCTAATGAAGTTGGTGGAAAAATTGAAAAAAT ATATACTCTAGAAAGCAATGAAGATGGTATAAGTTATATAGATGCTATGAAAGAAAATCTTTCAAAAATATATAATGCCT TATCATCACAAAAATAA
Upstream 100 bases:
>100_bases TTATTTTTATGATAGTTTTATTATAAATATTGACAATAATAGAAAAGTAATATAAAGTTTATATTATAATAATGCGAATC ATTTGCAAACAGGAGGAAGT
Downstream 100 bases:
>100_bases AAGAGAATACTTAGGATTGTTACTTAATTAGAAGGCAAGACTTAGATTTATTATTCTAATACCTATTAATAATAAAATAG GTGTTTTATAGGAATAATAA
Product: ABC transporter substrate-binding protein
Products: Zn (II) [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MRKKLVSIFLGVTMAAFFVGCQSTKTAENKKDNGKVDVTVSIEPLREFTEIVGGDKVNVKTMVPNGTEPHDFEPKTQDLL ELNKAKVFVYNGLGMEHWKEQVLNTIENKDVKVVEASKGAEVLKEGDKVDPHLWLSLDGAKIEAQNIKDALVEVDSDNKS YYEENFKKFAEKLDSLANEYKEKFNGLANKDFVTGHAAFGYLCREFGLKQVSVENLFGEGEITPQKMQEIVEFCKKNDIK TIFMPELASEKISQTLANEVGGKIEKIYTLESNEDGISYIDAMKENLSKIYNALSSQK
Sequences:
>Translated_298_residues MRKKLVSIFLGVTMAAFFVGCQSTKTAENKKDNGKVDVTVSIEPLREFTEIVGGDKVNVKTMVPNGTEPHDFEPKTQDLL ELNKAKVFVYNGLGMEHWKEQVLNTIENKDVKVVEASKGAEVLKEGDKVDPHLWLSLDGAKIEAQNIKDALVEVDSDNKS YYEENFKKFAEKLDSLANEYKEKFNGLANKDFVTGHAAFGYLCREFGLKQVSVENLFGEGEITPQKMQEIVEFCKKNDIK TIFMPELASEKISQTLANEVGGKIEKIYTLESNEDGISYIDAMKENLSKIYNALSSQK >Mature_298_residues MRKKLVSIFLGVTMAAFFVGCQSTKTAENKKDNGKVDVTVSIEPLREFTEIVGGDKVNVKTMVPNGTEPHDFEPKTQDLL ELNKAKVFVYNGLGMEHWKEQVLNTIENKDVKVVEASKGAEVLKEGDKVDPHLWLSLDGAKIEAQNIKDALVEVDSDNKS YYEENFKKFAEKLDSLANEYKEKFNGLANKDFVTGHAAFGYLCREFGLKQVSVENLFGEGEITPQKMQEIVEFCKKNDIK TIFMPELASEKISQTLANEVGGKIEKIYTLESNEDGISYIDAMKENLSKIYNALSSQK
Specific function: Part of an ATP-driven transport system TP_0034/TP_0035/TP_0036 for a metal. Metal-binding component [H]
COG id: COG0803
COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 9 family [H]
Homologues:
Organism=Escherichia coli, GI87081990, Length=215, Percent_Identity=23.7209302325581, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006127 - InterPro: IPR006129 - InterPro: IPR006128 [H]
Pfam domain/function: PF01297 SBP_bac_9 [H]
EC number: NA
Molecular weight: Translated: 33457; Mature: 33457
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKLVSIFLGVTMAAFFVGCQSTKTAENKKDNGKVDVTVSIEPLREFTEIVGGDKVNVK CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCEEEE TMVPNGTEPHDFEPKTQDLLELNKAKVFVYNGLGMEHWKEQVLNTIENKDVKVVEASKGA EECCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCH EVLKEGDKVDPHLWLSLDGAKIEAQNIKDALVEVDSDNKSYYEENFKKFAEKLDSLANEY HHHHCCCCCCCEEEEEECCCEEEHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHH KEKFNGLANKDFVTGHAAFGYLCREFGLKQVSVENLFGEGEITPQKMQEIVEFCKKNDIK HHHHCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC TIFMPELASEKISQTLANEVGGKIEKIYTLESNEDGISYIDAMKENLSKIYNALSSQK EEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKKLVSIFLGVTMAAFFVGCQSTKTAENKKDNGKVDVTVSIEPLREFTEIVGGDKVNVK CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHCCCCEEEE TMVPNGTEPHDFEPKTQDLLELNKAKVFVYNGLGMEHWKEQVLNTIENKDVKVVEASKGA EECCCCCCCCCCCCCHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCH EVLKEGDKVDPHLWLSLDGAKIEAQNIKDALVEVDSDNKSYYEENFKKFAEKLDSLANEY HHHHCCCCCCCEEEEEECCCEEEHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHH KEKFNGLANKDFVTGHAAFGYLCREFGLKQVSVENLFGEGEITPQKMQEIVEFCKKNDIK HHHHCCCCCCCEEEHHHHHHHHHHHHCCCHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC TIFMPELASEKISQTLANEVGGKIEKIYTLESNEDGISYIDAMKENLSKIYNALSSQK EEECCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Zn (II) [Periplasm]; H2O; ATP [C]
Specific reaction: Zn (II) [Periplasm] + H2O + ATP = Zn (II) [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]