Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311095

Identifier: 18311095

GI number: 18311095

Start: 2423724

End: 2425544

Strand: Reverse

Name: 18311095

Synonym: CPE2113

Alternate gene names: NA

Gene position: 2425544-2423724 (Counterclockwise)

Preceding gene: 18311096

Following gene: 18311094

Centisome position: 80.01

GC content: 31.85

Gene sequence:

>1821_bases
ATAGAATCAGTACAATGTCCAAACTTTTTAAGTGAAGATTCTCCAGATTATTTAGTTGAATATAGAGGAAATTTAAAAGA
AGAGTTAGAAAAAATTCCTTATGCATGTGGAGACGCGATTACTGATACCTTAGGTGTTGTTTCAACACCACCACAGTATT
TAAAACAACTAAGAAAAGATGTTCCATCAATTCTTTATATACAGACAAGAGTGCCTTATGTTTTACAGGAGGTATCTCCA
CAAGAAACTGATAATATATCCACAATTGTAAATAATCCTTATTTAGGACTTGATGGAAGCGGAGTCATAGTTGGAATAGT
TGATACGGGAATAGATTATCTTAATAAGGAATTTATGAGAGAAGATGATACCTCTAGAATACTTACTATTTGGGACCAAA
AGAGTACTAAAAAACCTAATGATTCAGTTTATGTAGGGTCCATATTTACTAATGAAGACATAAATAATGCTATTAAAAGT
AAGGAAGATGGAGGAAATCCATATGATATTGTTGATAGTAGAGATGAAATAGGACATGGAACTAAACTAGCTAGCATAAT
AGGAGCCCGTGGATATAATAGGAATATTAAAGGTATTGCACCTAATTGTGATTTTGCTATTGTAAAACTATTAACTTCAC
TTAGCTATGAAAAAGCCTTTAGAGAAAATGGAATAGAGGATGTTCCAGTTTATAATGAAGCTGAAATTATAGCTGGAATA
GAATATCTTAAAAATTATGCATTTAGTCTTAAGAGACCACTAGTAATTTGTTTAGCAATAGGATGCACTGAAGCAAGTCA
TGATGGAAGAGGACTTTTTTCTAGATATTTAACTACAATTGGCTCAATAAGAGGAGTTGCTGTAGTTGCTGGAGTTGGAA
ATGAGGGAAGTGCACAAGGACATGCCTCTGGAGTTATAGAACTTGAAAATAGTGTTGAAAAAGTTGAATTATCAATACCG
AGAGAAATAAAAAATTTTAACTTAGCTTTCTGGATTCAAAGACCTAATATAGTATCCTTAAATATAAAATCTCCTAGTGG
AGAAGAATCTTCATTCATAGATGCTAAAATTTCTCTAGAGAGATCATTCAAATTTATATTAACGGATACCAGTGTTAATA
TTAACTATTATGTTCCTGATACCTTTACAGGAAATGAACTTATTTATATAGATTTTAAAGATATTAAGCCTGGAATATGG
ACTTTTGAGTTAAGAGGAGATTATATAACTAATGGAAGATATGATGTATGGTTAGCTCCAAGCTCTTTATTGCCTGAAAA
TACAAAATTTCTTAGCCCTAATCCATTAAATACTCTTATGGTTCCATCTACTGCTAGATATATAATAAGTGTAGCCTATT
ATAATAGTCAAACTCAATCTTTATTAGCAGAGTCTGGAAAAGGTTTTAATATTAATGGATGGATAAATCCAGATATAACC
ACTGCAGGTAAGGATATTTTGACCATGTTTCCTGGCGATAGAGTTGGAAGAATGTCAGGGAGTTCTCCAGCAACGGCAAT
AATTGTAGGGGTATGTGCCTTATTATTTCAATGGGGAATTATAAATGGAAATGATAGAACAATGAATTCTAGCAAGTTAA
GAAGCTATTTAATATATGGTGCTACTAGAATTCCGGGACAAACATATCCTAATGAATATACTGGATATGGATATTTAGAT
TTATATGAAATATTTAAAAATATAATAGCGGTCCCTTTAGCACCTTATAGAAGTGCTAAGGTTAATGAAGATTATACTGA
GTATTATTGTGGAAGGATGTTAGTTAGCGTGCCTTCTGATTTTTATTATGGAGGGGAATAA

Upstream 100 bases:

>100_bases
TTTTTATAAAGGATTAGGCAGAGAGAAAAGTGTTATTTGTAACATTATTTAAATTATAGAGTAAATTAAAATAAGAGTTA
ATTTTAAGAGGTGAGGAGCC

Downstream 100 bases:

>100_bases
AATGGAATTTAAGTCTTCAGCTCCAGAGAACGTATTTAATAATGAAAATTATTTAAATTATTTAGTTCAGTATCAAGGTG
ATATTATAGGAGAGTTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase S8 And S; Subtilase Family Protein; Subtilisin Like Protease; Ser-Type Protease; Germination-Specific Protease; Subtilase; Serine-Type Protease; Spore-Cortex-Lytic; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Protease CspB; DNA/RNA Non-Specific Endonuclease

Number of amino acids: Translated: 606; Mature: 606

Protein sequence:

>606_residues
MESVQCPNFLSEDSPDYLVEYRGNLKEELEKIPYACGDAITDTLGVVSTPPQYLKQLRKDVPSILYIQTRVPYVLQEVSP
QETDNISTIVNNPYLGLDGSGVIVGIVDTGIDYLNKEFMREDDTSRILTIWDQKSTKKPNDSVYVGSIFTNEDINNAIKS
KEDGGNPYDIVDSRDEIGHGTKLASIIGARGYNRNIKGIAPNCDFAIVKLLTSLSYEKAFRENGIEDVPVYNEAEIIAGI
EYLKNYAFSLKRPLVICLAIGCTEASHDGRGLFSRYLTTIGSIRGVAVVAGVGNEGSAQGHASGVIELENSVEKVELSIP
REIKNFNLAFWIQRPNIVSLNIKSPSGEESSFIDAKISLERSFKFILTDTSVNINYYVPDTFTGNELIYIDFKDIKPGIW
TFELRGDYITNGRYDVWLAPSSLLPENTKFLSPNPLNTLMVPSTARYIISVAYYNSQTQSLLAESGKGFNINGWINPDIT
TAGKDILTMFPGDRVGRMSGSSPATAIIVGVCALLFQWGIINGNDRTMNSSKLRSYLIYGATRIPGQTYPNEYTGYGYLD
LYEIFKNIIAVPLAPYRSAKVNEDYTEYYCGRMLVSVPSDFYYGGE

Sequences:

>Translated_606_residues
MESVQCPNFLSEDSPDYLVEYRGNLKEELEKIPYACGDAITDTLGVVSTPPQYLKQLRKDVPSILYIQTRVPYVLQEVSP
QETDNISTIVNNPYLGLDGSGVIVGIVDTGIDYLNKEFMREDDTSRILTIWDQKSTKKPNDSVYVGSIFTNEDINNAIKS
KEDGGNPYDIVDSRDEIGHGTKLASIIGARGYNRNIKGIAPNCDFAIVKLLTSLSYEKAFRENGIEDVPVYNEAEIIAGI
EYLKNYAFSLKRPLVICLAIGCTEASHDGRGLFSRYLTTIGSIRGVAVVAGVGNEGSAQGHASGVIELENSVEKVELSIP
REIKNFNLAFWIQRPNIVSLNIKSPSGEESSFIDAKISLERSFKFILTDTSVNINYYVPDTFTGNELIYIDFKDIKPGIW
TFELRGDYITNGRYDVWLAPSSLLPENTKFLSPNPLNTLMVPSTARYIISVAYYNSQTQSLLAESGKGFNINGWINPDIT
TAGKDILTMFPGDRVGRMSGSSPATAIIVGVCALLFQWGIINGNDRTMNSSKLRSYLIYGATRIPGQTYPNEYTGYGYLD
LYEIFKNIIAVPLAPYRSAKVNEDYTEYYCGRMLVSVPSDFYYGGE
>Mature_606_residues
MESVQCPNFLSEDSPDYLVEYRGNLKEELEKIPYACGDAITDTLGVVSTPPQYLKQLRKDVPSILYIQTRVPYVLQEVSP
QETDNISTIVNNPYLGLDGSGVIVGIVDTGIDYLNKEFMREDDTSRILTIWDQKSTKKPNDSVYVGSIFTNEDINNAIKS
KEDGGNPYDIVDSRDEIGHGTKLASIIGARGYNRNIKGIAPNCDFAIVKLLTSLSYEKAFRENGIEDVPVYNEAEIIAGI
EYLKNYAFSLKRPLVICLAIGCTEASHDGRGLFSRYLTTIGSIRGVAVVAGVGNEGSAQGHASGVIELENSVEKVELSIP
REIKNFNLAFWIQRPNIVSLNIKSPSGEESSFIDAKISLERSFKFILTDTSVNINYYVPDTFTGNELIYIDFKDIKPGIW
TFELRGDYITNGRYDVWLAPSSLLPENTKFLSPNPLNTLMVPSTARYIISVAYYNSQTQSLLAESGKGFNINGWINPDIT
TAGKDILTMFPGDRVGRMSGSSPATAIIVGVCALLFQWGIINGNDRTMNSSKLRSYLIYGATRIPGQTYPNEYTGYGYLD
LYEIFKNIIAVPLAPYRSAKVNEDYTEYYCGRMLVSVPSDFYYGGE

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67289; Mature: 67289

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS00136 SUBTILASE_ASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESVQCPNFLSEDSPDYLVEYRGNLKEELEKIPYACGDAITDTLGVVSTPPQYLKQLRKD
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHC
VPSILYIQTRVPYVLQEVSPQETDNISTIVNNPYLGLDGSGVIVGIVDTGIDYLNKEFMR
CCCEEEEECCCCHHHHHCCCCCCCCCEEEECCCEECCCCCCEEEEEHHCCHHHHHHHHHC
EDDTSRILTIWDQKSTKKPNDSVYVGSIFTNEDINNAIKSKEDGGNPYDIVDSRDEIGHG
CCCCCEEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCHHCCCC
TKLASIIGARGYNRNIKGIAPNCDFAIVKLLTSLSYEKAFRENGIEDVPVYNEAEIIAGI
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
EYLKNYAFSLKRPLVICLAIGCTEASHDGRGLFSRYLTTIGSIRGVAVVAGVGNEGSAQG
HHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
HASGVIELENSVEKVELSIPREIKNFNLAFWIQRPNIVSLNIKSPSGEESSFIDAKISLE
CCCEEEEECCCCEEEEEECCHHHCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEEEE
RSFKFILTDTSVNINYYVPDTFTGNELIYIDFKDIKPGIWTFELRGDYITNGRYDVWLAP
CCEEEEEEECEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCEEECCEEEEEECC
SSLLPENTKFLSPNPLNTLMVPSTARYIISVAYYNSQTQSLLAESGKGFNINGWINPDIT
HHCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCHHHHHHHHCCCCEEECCEECCCCC
TAGKDILTMFPGDRVGRMSGSSPATAIIVGVCALLFQWGIINGNDRTMNSSKLRSYLIYG
CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEEEC
ATRIPGQTYPNEYTGYGYLDLYEIFKNIIAVPLAPYRSAKVNEDYTEYYCGRMLVSVPSD
CEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEEECCCC
FYYGGE
CCCCCC
>Mature Secondary Structure
MESVQCPNFLSEDSPDYLVEYRGNLKEELEKIPYACGDAITDTLGVVSTPPQYLKQLRKD
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCHHHHHHCCCCCCCHHHHHHHHHC
VPSILYIQTRVPYVLQEVSPQETDNISTIVNNPYLGLDGSGVIVGIVDTGIDYLNKEFMR
CCCEEEEECCCCHHHHHCCCCCCCCCEEEECCCEECCCCCCEEEEEHHCCHHHHHHHHHC
EDDTSRILTIWDQKSTKKPNDSVYVGSIFTNEDINNAIKSKEDGGNPYDIVDSRDEIGHG
CCCCCEEEEEECCCCCCCCCCCEEEEEEEECCHHHHHHHCCCCCCCCCCCCCCCHHCCCC
TKLASIIGARGYNRNIKGIAPNCDFAIVKLLTSLSYEKAFRENGIEDVPVYNEAEIIAGI
HHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
EYLKNYAFSLKRPLVICLAIGCTEASHDGRGLFSRYLTTIGSIRGVAVVAGVGNEGSAQG
HHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
HASGVIELENSVEKVELSIPREIKNFNLAFWIQRPNIVSLNIKSPSGEESSFIDAKISLE
CCCEEEEECCCCEEEEEECCHHHCCCCEEEEEECCCEEEEEECCCCCCCCCEEEEEEEEE
RSFKFILTDTSVNINYYVPDTFTGNELIYIDFKDIKPGIWTFELRGDYITNGRYDVWLAP
CCEEEEEEECEEEEEEEECCCCCCCEEEEEEEECCCCCEEEEEEECCEEECCEEEEEECC
SSLLPENTKFLSPNPLNTLMVPSTARYIISVAYYNSQTQSLLAESGKGFNINGWINPDIT
HHCCCCCCCCCCCCCCCEEECCCCCEEEEEEEEECCHHHHHHHHCCCCEEECCEECCCCC
TAGKDILTMFPGDRVGRMSGSSPATAIIVGVCALLFQWGIINGNDRTMNSSKLRSYLIYG
CCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHEEEEC
ATRIPGQTYPNEYTGYGYLDLYEIFKNIIAVPLAPYRSAKVNEDYTEYYCGRMLVSVPSD
CEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHEEEECCCC
FYYGGE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA