| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18311094
Identifier: 18311094
GI number: 18311094
Start: 2421968
End: 2423722
Strand: Reverse
Name: 18311094
Synonym: CPE2112
Alternate gene names: NA
Gene position: 2423722-2421968 (Counterclockwise)
Preceding gene: 18311095
Following gene: 18311091
Centisome position: 79.95
GC content: 30.88
Gene sequence:
>1755_bases ATGGAATTTAAGTCTTCAGCTCCAGAGAACGTATTTAATAATGAAAATTATTTAAATTATTTAGTTCAGTATCAAGGTGA TATTATAGGAGAGTTTAGTGGTGAAGATGGAATATATGCAACCTTAATTAATAATAGATATGCCATAATAACTATTGATA AAAACTTACAGGAATATGAAAATGATATATCTATGATTAAATATAAAAAAGAAAATGGAAGAGATGTAGAAATAGATAGC ATTACTTATATAAAGAATCCAGAAGGATATGTACTTCAGGAAATAAGCCCTTTAGAGGCAGCAAATGTTGAATATGTTCA AATACAATCATACTTTAACCTAACAGGTAGAGGGGTTATTGTTGGAATTTTAGATACTGGAATAGATTATTTAAACGAAG AGTTTATGGATTCAAATGGTAATACAAGAATTTTAGGAATTTGGGATCAAACAATTTCAAGTGAGAGTTCAAGTAATGAT AATTTACCTTATGGAACTTTTTATTCAGAAGAAGATATAAATAGAGCAATAAGACTTAGTAGAGAAGGAGGAGATCCATA TACAATAGTTCCATCAAGAGATGAAATAGGTCATGGAACATCAATGGCAGGAATAATTGGATCATCAGGAAAAAATCCTA GGTTAAAGGGGGTTGCACCAGATTGTAAGTTCTTAGTTGTAAAGCTTGCACAGTCACTTTATTATAAAAAAGAGTATGAA ATAAACATACCTATTTATAATATAACTGAAATATTTACAGGAATACAATATTTATATTCATACTTTTTAAAGGGATCTCA AAGTATGATTATATATTTACCTTTGGGAACTAATAGAGGAAGTCATAAAGGAACAAGTATGTTAGAAGAATTTTTAGACT CTATATTAATAAATAGAGGAATTGCTTTAGTTACCGGTGCTGGAAATGAAGGAACTGCATTATTACACGGATCAGGAACT ATAAAACCTGATGGTCAAGTAACTACTCATGAATTTAATATAGATGAAAATCAAAAAAAGATTATTATTGAAGTTTGGGT ACAAATACCTAGTATTGCTTCCATAGAAATAGTTTCACCTACTGGAGGAACAACAGGAATAATTCAACCTTTTTTTGGAA AAGGAGATAGGTATGATTTTACAATTGAGCGTACTACAGTGTTAGTAAGTTATTATGTACCTGAAGAAATTTATGAAGAT TCTCTCATATTAGTTATACTAGACAATGTTCAAGCTGGAACATGGAGTTTTAAATTTAGAGGGTTAAAGGAAATAGAGGG AAGATATGATATTTGGTTGCCTCCAAGGGGAGTAAGTAAAGCTGCAACTAAGATGATACCTTCTGACCCATATGGAACAG TAACTGTCCCAGGTACTAGCTCATCAGTAATAACAGTAGCTGCATATAATCAATTAAATAATACACAGTTAAATTATTCA GGGAGAGGATTTCAGGATAATTATATTGATATAATAGATGTGGCAGCAGGAGGAGTAGATGCACTTACTATTGCACCAGA TAATAAGACAACTTTAGCAAATGGTACAAGTGTTGCAGCGGCTATAGTAGCTGGAATCTGTATTTTACTTTTTCAATGGG GAATAGTTGAAGGAAATTATCCCTATATGTTCTCTCAAACTTTAAAAGCTTTTATTGCAAGAGGTACAAGAAAGAGAAAA GGGGATACTTATCCAAATCCAGAGTGGGGATATGGAATAGTTGATATATTTAATATGTTTAATCTTACTAATTAA
Upstream 100 bases:
>100_bases CCTTATAGAAGTGCTAAGGTTAATGAAGATTATACTGAGTATTATTGTGGAAGGATGTTAGTTAGCGTGCCTTCTGATTT TTATTATGGAGGGGAATAAA
Downstream 100 bases:
>100_bases TTTACTTTATTATATAAAATATATTTTGAAAACTTATTATATTAAATTAGATAGGAAAAATAAAAAATACTCTGATTAAA CTTATTCATAAATCATATGT
Product: subtilase family protein
Products: NA
Alternate protein names: Peptidase S8 And S; Subtilase Family Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Subtilisin Like Protease; Ser-Type Protease; Germination-Specific Protease; Subtilase; Serine-Type Protease; Spore-Cortex-Lytic; Protease CspB; DNA/RNA Non-Specific Endonuclease; Subtilisin-Like Protease
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MEFKSSAPENVFNNENYLNYLVQYQGDIIGEFSGEDGIYATLINNRYAIITIDKNLQEYENDISMIKYKKENGRDVEIDS ITYIKNPEGYVLQEISPLEAANVEYVQIQSYFNLTGRGVIVGILDTGIDYLNEEFMDSNGNTRILGIWDQTISSESSSND NLPYGTFYSEEDINRAIRLSREGGDPYTIVPSRDEIGHGTSMAGIIGSSGKNPRLKGVAPDCKFLVVKLAQSLYYKKEYE INIPIYNITEIFTGIQYLYSYFLKGSQSMIIYLPLGTNRGSHKGTSMLEEFLDSILINRGIALVTGAGNEGTALLHGSGT IKPDGQVTTHEFNIDENQKKIIIEVWVQIPSIASIEIVSPTGGTTGIIQPFFGKGDRYDFTIERTTVLVSYYVPEEIYED SLILVILDNVQAGTWSFKFRGLKEIEGRYDIWLPPRGVSKAATKMIPSDPYGTVTVPGTSSSVITVAAYNQLNNTQLNYS GRGFQDNYIDIIDVAAGGVDALTIAPDNKTTLANGTSVAAAIVAGICILLFQWGIVEGNYPYMFSQTLKAFIARGTRKRK GDTYPNPEWGYGIVDIFNMFNLTN
Sequences:
>Translated_584_residues MEFKSSAPENVFNNENYLNYLVQYQGDIIGEFSGEDGIYATLINNRYAIITIDKNLQEYENDISMIKYKKENGRDVEIDS ITYIKNPEGYVLQEISPLEAANVEYVQIQSYFNLTGRGVIVGILDTGIDYLNEEFMDSNGNTRILGIWDQTISSESSSND NLPYGTFYSEEDINRAIRLSREGGDPYTIVPSRDEIGHGTSMAGIIGSSGKNPRLKGVAPDCKFLVVKLAQSLYYKKEYE INIPIYNITEIFTGIQYLYSYFLKGSQSMIIYLPLGTNRGSHKGTSMLEEFLDSILINRGIALVTGAGNEGTALLHGSGT IKPDGQVTTHEFNIDENQKKIIIEVWVQIPSIASIEIVSPTGGTTGIIQPFFGKGDRYDFTIERTTVLVSYYVPEEIYED SLILVILDNVQAGTWSFKFRGLKEIEGRYDIWLPPRGVSKAATKMIPSDPYGTVTVPGTSSSVITVAAYNQLNNTQLNYS GRGFQDNYIDIIDVAAGGVDALTIAPDNKTTLANGTSVAAAIVAGICILLFQWGIVEGNYPYMFSQTLKAFIARGTRKRK GDTYPNPEWGYGIVDIFNMFNLTN >Mature_584_residues MEFKSSAPENVFNNENYLNYLVQYQGDIIGEFSGEDGIYATLINNRYAIITIDKNLQEYENDISMIKYKKENGRDVEIDS ITYIKNPEGYVLQEISPLEAANVEYVQIQSYFNLTGRGVIVGILDTGIDYLNEEFMDSNGNTRILGIWDQTISSESSSND NLPYGTFYSEEDINRAIRLSREGGDPYTIVPSRDEIGHGTSMAGIIGSSGKNPRLKGVAPDCKFLVVKLAQSLYYKKEYE INIPIYNITEIFTGIQYLYSYFLKGSQSMIIYLPLGTNRGSHKGTSMLEEFLDSILINRGIALVTGAGNEGTALLHGSGT IKPDGQVTTHEFNIDENQKKIIIEVWVQIPSIASIEIVSPTGGTTGIIQPFFGKGDRYDFTIERTTVLVSYYVPEEIYED SLILVILDNVQAGTWSFKFRGLKEIEGRYDIWLPPRGVSKAATKMIPSDPYGTVTVPGTSSSVITVAAYNQLNNTQLNYS GRGFQDNYIDIIDVAAGGVDALTIAPDNKTTLANGTSVAAAIVAGICILLFQWGIVEGNYPYMFSQTLKAFIARGTRKRK GDTYPNPEWGYGIVDIFNMFNLTN
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64822; Mature: 64822
Theoretical pI: Translated: 4.44; Mature: 4.44
Prosite motif: PS00136 SUBTILASE_ASP ; PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFKSSAPENVFNNENYLNYLVQYQGDIIGEFSGEDGIYATLINNRYAIITIDKNLQEYE CCCCCCCCCCCCCCCHHEEEEEEECCCEEEEECCCCCEEEEEECCCEEEEEECCCHHHHH NDISMIKYKKENGRDVEIDSITYIKNPEGYVLQEISPLEAANVEYVQIQSYFNLTGRGVI CCEEEEEEECCCCCEEEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEEEEECCCCCEEE VGILDTGIDYLNEEFMDSNGNTRILGIWDQTISSESSSNDNLPYGTFYSEEDINRAIRLS EEEHHCCHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCHHHHHHHEEEE REGGDPYTIVPSRDEIGHGTSMAGIIGSSGKNPRLKGVAPDCKFLVVKLAQSLYYKKEYE CCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE INIPIYNITEIFTGIQYLYSYFLKGSQSMIIYLPLGTNRGSHKGTSMLEEFLDSILINRG EECCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC IALVTGAGNEGTALLHGSGTIKPDGQVTTHEFNIDENQKKIIIEVWVQIPSIASIEIVSP EEEEECCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECC TGGTTGIIQPFFGKGDRYDFTIERTTVLVSYYVPEEIYEDSLILVILDNVQAGTWSFKFR CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCHHHCCCCEEEEEEECCCCCEEEEEEC GLKEIEGRYDIWLPPRGVSKAATKMIPSDPYGTVTVPGTSSSVITVAAYNQLNNTQLNYS CHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCCEEECC GRGFQDNYIDIIDVAAGGVDALTIAPDNKTTLANGTSVAAAIVAGICILLFQWGIVEGNY CCCCCCCCEEEEEECCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCEECCCC PYMFSQTLKAFIARGTRKRKGDTYPNPEWGYGIVDIFNMFNLTN CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MEFKSSAPENVFNNENYLNYLVQYQGDIIGEFSGEDGIYATLINNRYAIITIDKNLQEYE CCCCCCCCCCCCCCCHHEEEEEEECCCEEEEECCCCCEEEEEECCCEEEEEECCCHHHHH NDISMIKYKKENGRDVEIDSITYIKNPEGYVLQEISPLEAANVEYVQIQSYFNLTGRGVI CCEEEEEEECCCCCEEEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEEEEECCCCCEEE VGILDTGIDYLNEEFMDSNGNTRILGIWDQTISSESSSNDNLPYGTFYSEEDINRAIRLS EEEHHCCHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCHHHHHHHEEEE REGGDPYTIVPSRDEIGHGTSMAGIIGSSGKNPRLKGVAPDCKFLVVKLAQSLYYKKEYE CCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE INIPIYNITEIFTGIQYLYSYFLKGSQSMIIYLPLGTNRGSHKGTSMLEEFLDSILINRG EECCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC IALVTGAGNEGTALLHGSGTIKPDGQVTTHEFNIDENQKKIIIEVWVQIPSIASIEIVSP EEEEECCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECC TGGTTGIIQPFFGKGDRYDFTIERTTVLVSYYVPEEIYEDSLILVILDNVQAGTWSFKFR CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCHHHCCCCEEEEEEECCCCCEEEEEEC GLKEIEGRYDIWLPPRGVSKAATKMIPSDPYGTVTVPGTSSSVITVAAYNQLNNTQLNYS CHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCCEEECC GRGFQDNYIDIIDVAAGGVDALTIAPDNKTTLANGTSVAAAIVAGICILLFQWGIVEGNY CCCCCCCCEEEEEECCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCEECCCC PYMFSQTLKAFIARGTRKRKGDTYPNPEWGYGIVDIFNMFNLTN CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA