Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311094

Identifier: 18311094

GI number: 18311094

Start: 2421968

End: 2423722

Strand: Reverse

Name: 18311094

Synonym: CPE2112

Alternate gene names: NA

Gene position: 2423722-2421968 (Counterclockwise)

Preceding gene: 18311095

Following gene: 18311091

Centisome position: 79.95

GC content: 30.88

Gene sequence:

>1755_bases
ATGGAATTTAAGTCTTCAGCTCCAGAGAACGTATTTAATAATGAAAATTATTTAAATTATTTAGTTCAGTATCAAGGTGA
TATTATAGGAGAGTTTAGTGGTGAAGATGGAATATATGCAACCTTAATTAATAATAGATATGCCATAATAACTATTGATA
AAAACTTACAGGAATATGAAAATGATATATCTATGATTAAATATAAAAAAGAAAATGGAAGAGATGTAGAAATAGATAGC
ATTACTTATATAAAGAATCCAGAAGGATATGTACTTCAGGAAATAAGCCCTTTAGAGGCAGCAAATGTTGAATATGTTCA
AATACAATCATACTTTAACCTAACAGGTAGAGGGGTTATTGTTGGAATTTTAGATACTGGAATAGATTATTTAAACGAAG
AGTTTATGGATTCAAATGGTAATACAAGAATTTTAGGAATTTGGGATCAAACAATTTCAAGTGAGAGTTCAAGTAATGAT
AATTTACCTTATGGAACTTTTTATTCAGAAGAAGATATAAATAGAGCAATAAGACTTAGTAGAGAAGGAGGAGATCCATA
TACAATAGTTCCATCAAGAGATGAAATAGGTCATGGAACATCAATGGCAGGAATAATTGGATCATCAGGAAAAAATCCTA
GGTTAAAGGGGGTTGCACCAGATTGTAAGTTCTTAGTTGTAAAGCTTGCACAGTCACTTTATTATAAAAAAGAGTATGAA
ATAAACATACCTATTTATAATATAACTGAAATATTTACAGGAATACAATATTTATATTCATACTTTTTAAAGGGATCTCA
AAGTATGATTATATATTTACCTTTGGGAACTAATAGAGGAAGTCATAAAGGAACAAGTATGTTAGAAGAATTTTTAGACT
CTATATTAATAAATAGAGGAATTGCTTTAGTTACCGGTGCTGGAAATGAAGGAACTGCATTATTACACGGATCAGGAACT
ATAAAACCTGATGGTCAAGTAACTACTCATGAATTTAATATAGATGAAAATCAAAAAAAGATTATTATTGAAGTTTGGGT
ACAAATACCTAGTATTGCTTCCATAGAAATAGTTTCACCTACTGGAGGAACAACAGGAATAATTCAACCTTTTTTTGGAA
AAGGAGATAGGTATGATTTTACAATTGAGCGTACTACAGTGTTAGTAAGTTATTATGTACCTGAAGAAATTTATGAAGAT
TCTCTCATATTAGTTATACTAGACAATGTTCAAGCTGGAACATGGAGTTTTAAATTTAGAGGGTTAAAGGAAATAGAGGG
AAGATATGATATTTGGTTGCCTCCAAGGGGAGTAAGTAAAGCTGCAACTAAGATGATACCTTCTGACCCATATGGAACAG
TAACTGTCCCAGGTACTAGCTCATCAGTAATAACAGTAGCTGCATATAATCAATTAAATAATACACAGTTAAATTATTCA
GGGAGAGGATTTCAGGATAATTATATTGATATAATAGATGTGGCAGCAGGAGGAGTAGATGCACTTACTATTGCACCAGA
TAATAAGACAACTTTAGCAAATGGTACAAGTGTTGCAGCGGCTATAGTAGCTGGAATCTGTATTTTACTTTTTCAATGGG
GAATAGTTGAAGGAAATTATCCCTATATGTTCTCTCAAACTTTAAAAGCTTTTATTGCAAGAGGTACAAGAAAGAGAAAA
GGGGATACTTATCCAAATCCAGAGTGGGGATATGGAATAGTTGATATATTTAATATGTTTAATCTTACTAATTAA

Upstream 100 bases:

>100_bases
CCTTATAGAAGTGCTAAGGTTAATGAAGATTATACTGAGTATTATTGTGGAAGGATGTTAGTTAGCGTGCCTTCTGATTT
TTATTATGGAGGGGAATAAA

Downstream 100 bases:

>100_bases
TTTACTTTATTATATAAAATATATTTTGAAAACTTATTATATTAAATTAGATAGGAAAAATAAAAAATACTCTGATTAAA
CTTATTCATAAATCATATGT

Product: subtilase family protein

Products: NA

Alternate protein names: Peptidase S8 And S; Subtilase Family Protein; Peptidase S8/S53 Subtilisin Kexin Sedolisin; Subtilisin Like Protease; Ser-Type Protease; Germination-Specific Protease; Subtilase; Serine-Type Protease; Spore-Cortex-Lytic; Protease CspB; DNA/RNA Non-Specific Endonuclease; Subtilisin-Like Protease

Number of amino acids: Translated: 584; Mature: 584

Protein sequence:

>584_residues
MEFKSSAPENVFNNENYLNYLVQYQGDIIGEFSGEDGIYATLINNRYAIITIDKNLQEYENDISMIKYKKENGRDVEIDS
ITYIKNPEGYVLQEISPLEAANVEYVQIQSYFNLTGRGVIVGILDTGIDYLNEEFMDSNGNTRILGIWDQTISSESSSND
NLPYGTFYSEEDINRAIRLSREGGDPYTIVPSRDEIGHGTSMAGIIGSSGKNPRLKGVAPDCKFLVVKLAQSLYYKKEYE
INIPIYNITEIFTGIQYLYSYFLKGSQSMIIYLPLGTNRGSHKGTSMLEEFLDSILINRGIALVTGAGNEGTALLHGSGT
IKPDGQVTTHEFNIDENQKKIIIEVWVQIPSIASIEIVSPTGGTTGIIQPFFGKGDRYDFTIERTTVLVSYYVPEEIYED
SLILVILDNVQAGTWSFKFRGLKEIEGRYDIWLPPRGVSKAATKMIPSDPYGTVTVPGTSSSVITVAAYNQLNNTQLNYS
GRGFQDNYIDIIDVAAGGVDALTIAPDNKTTLANGTSVAAAIVAGICILLFQWGIVEGNYPYMFSQTLKAFIARGTRKRK
GDTYPNPEWGYGIVDIFNMFNLTN

Sequences:

>Translated_584_residues
MEFKSSAPENVFNNENYLNYLVQYQGDIIGEFSGEDGIYATLINNRYAIITIDKNLQEYENDISMIKYKKENGRDVEIDS
ITYIKNPEGYVLQEISPLEAANVEYVQIQSYFNLTGRGVIVGILDTGIDYLNEEFMDSNGNTRILGIWDQTISSESSSND
NLPYGTFYSEEDINRAIRLSREGGDPYTIVPSRDEIGHGTSMAGIIGSSGKNPRLKGVAPDCKFLVVKLAQSLYYKKEYE
INIPIYNITEIFTGIQYLYSYFLKGSQSMIIYLPLGTNRGSHKGTSMLEEFLDSILINRGIALVTGAGNEGTALLHGSGT
IKPDGQVTTHEFNIDENQKKIIIEVWVQIPSIASIEIVSPTGGTTGIIQPFFGKGDRYDFTIERTTVLVSYYVPEEIYED
SLILVILDNVQAGTWSFKFRGLKEIEGRYDIWLPPRGVSKAATKMIPSDPYGTVTVPGTSSSVITVAAYNQLNNTQLNYS
GRGFQDNYIDIIDVAAGGVDALTIAPDNKTTLANGTSVAAAIVAGICILLFQWGIVEGNYPYMFSQTLKAFIARGTRKRK
GDTYPNPEWGYGIVDIFNMFNLTN
>Mature_584_residues
MEFKSSAPENVFNNENYLNYLVQYQGDIIGEFSGEDGIYATLINNRYAIITIDKNLQEYENDISMIKYKKENGRDVEIDS
ITYIKNPEGYVLQEISPLEAANVEYVQIQSYFNLTGRGVIVGILDTGIDYLNEEFMDSNGNTRILGIWDQTISSESSSND
NLPYGTFYSEEDINRAIRLSREGGDPYTIVPSRDEIGHGTSMAGIIGSSGKNPRLKGVAPDCKFLVVKLAQSLYYKKEYE
INIPIYNITEIFTGIQYLYSYFLKGSQSMIIYLPLGTNRGSHKGTSMLEEFLDSILINRGIALVTGAGNEGTALLHGSGT
IKPDGQVTTHEFNIDENQKKIIIEVWVQIPSIASIEIVSPTGGTTGIIQPFFGKGDRYDFTIERTTVLVSYYVPEEIYED
SLILVILDNVQAGTWSFKFRGLKEIEGRYDIWLPPRGVSKAATKMIPSDPYGTVTVPGTSSSVITVAAYNQLNNTQLNYS
GRGFQDNYIDIIDVAAGGVDALTIAPDNKTTLANGTSVAAAIVAGICILLFQWGIVEGNYPYMFSQTLKAFIARGTRKRK
GDTYPNPEWGYGIVDIFNMFNLTN

Specific function: Unknown

COG id: COG1404

COG function: function code O; Subtilisin-like serine proteases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64822; Mature: 64822

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00136 SUBTILASE_ASP ; PS00165 DEHYDRATASE_SER_THR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFKSSAPENVFNNENYLNYLVQYQGDIIGEFSGEDGIYATLINNRYAIITIDKNLQEYE
CCCCCCCCCCCCCCCHHEEEEEEECCCEEEEECCCCCEEEEEECCCEEEEEECCCHHHHH
NDISMIKYKKENGRDVEIDSITYIKNPEGYVLQEISPLEAANVEYVQIQSYFNLTGRGVI
CCEEEEEEECCCCCEEEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEEEEECCCCCEEE
VGILDTGIDYLNEEFMDSNGNTRILGIWDQTISSESSSNDNLPYGTFYSEEDINRAIRLS
EEEHHCCHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCHHHHHHHEEEE
REGGDPYTIVPSRDEIGHGTSMAGIIGSSGKNPRLKGVAPDCKFLVVKLAQSLYYKKEYE
CCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE
INIPIYNITEIFTGIQYLYSYFLKGSQSMIIYLPLGTNRGSHKGTSMLEEFLDSILINRG
EECCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC
IALVTGAGNEGTALLHGSGTIKPDGQVTTHEFNIDENQKKIIIEVWVQIPSIASIEIVSP
EEEEECCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECC
TGGTTGIIQPFFGKGDRYDFTIERTTVLVSYYVPEEIYEDSLILVILDNVQAGTWSFKFR
CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCHHHCCCCEEEEEEECCCCCEEEEEEC
GLKEIEGRYDIWLPPRGVSKAATKMIPSDPYGTVTVPGTSSSVITVAAYNQLNNTQLNYS
CHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCCEEECC
GRGFQDNYIDIIDVAAGGVDALTIAPDNKTTLANGTSVAAAIVAGICILLFQWGIVEGNY
CCCCCCCCEEEEEECCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCEECCCC
PYMFSQTLKAFIARGTRKRKGDTYPNPEWGYGIVDIFNMFNLTN
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MEFKSSAPENVFNNENYLNYLVQYQGDIIGEFSGEDGIYATLINNRYAIITIDKNLQEYE
CCCCCCCCCCCCCCCHHEEEEEEECCCEEEEECCCCCEEEEEECCCEEEEEECCCHHHHH
NDISMIKYKKENGRDVEIDSITYIKNPEGYVLQEISPLEAANVEYVQIQSYFNLTGRGVI
CCEEEEEEECCCCCEEEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEEEEECCCCCEEE
VGILDTGIDYLNEEFMDSNGNTRILGIWDQTISSESSSNDNLPYGTFYSEEDINRAIRLS
EEEHHCCHHHHHHHHHCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCHHHHHHHEEEE
REGGDPYTIVPSRDEIGHGTSMAGIIGSSGKNPRLKGVAPDCKFLVVKLAQSLYYKKEYE
CCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEE
INIPIYNITEIFTGIQYLYSYFLKGSQSMIIYLPLGTNRGSHKGTSMLEEFLDSILINRG
EECCEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCC
IALVTGAGNEGTALLHGSGTIKPDGQVTTHEFNIDENQKKIIIEVWVQIPSIASIEIVSP
EEEEECCCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCCCEEEEECC
TGGTTGIIQPFFGKGDRYDFTIERTTVLVSYYVPEEIYEDSLILVILDNVQAGTWSFKFR
CCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCHHHCCCCEEEEEEECCCCCEEEEEEC
GLKEIEGRYDIWLPPRGVSKAATKMIPSDPYGTVTVPGTSSSVITVAAYNQLNNTQLNYS
CHHHCCCCEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCCEEECC
GRGFQDNYIDIIDVAAGGVDALTIAPDNKTTLANGTSVAAAIVAGICILLFQWGIVEGNY
CCCCCCCCEEEEEECCCCCEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHCEECCCC
PYMFSQTLKAFIARGTRKRKGDTYPNPEWGYGIVDIFNMFNLTN
CHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA