Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311077

Identifier: 18311077

GI number: 18311077

Start: 2403482

End: 2403898

Strand: Reverse

Name: 18311077

Synonym: CPE2095

Alternate gene names: NA

Gene position: 2403898-2403482 (Counterclockwise)

Preceding gene: 18311078

Following gene: 18311075

Centisome position: 79.3

GC content: 23.02

Gene sequence:

>417_bases
ATGTCAGTAGATAAAAATAGAATAAATCAAGATTTAAAGTTTATTTGTGAAAATATTAAAAAGTTAGAAATATTAAATAG
ACTAGGAGAAGAGGCGTTTTTAAAAGATTTTAAAAATGTGGATAGTACAAAGTACTTATTAAGAAGTTCTATTGAAGCAG
TTTTAGATTTATCAAACTATGCTGTTATTTCTAATGGATGGGATATGCCAGAGAATATAGAGAAAACTTTTAAAGTTCTT
AGGGAAAAAAATATAATAAGAGATTTTGAATTTGAAGAGTATATGGAGCTTGTGAATTTAAAGGATAAACTTACCTTCAT
GTATGCTTCTATAGAAGATGAATTCATATTTAATGAGTTAAAAAAGACAATAATAAAGTTAAAAAATATAAAAAAATCCT
TAGATAATTTAAAATAA

Upstream 100 bases:

>100_bases
ATTTTTGTGATGAAAATTTAAATATTAATTACTTATAAAATAAATTTTAGGTTTATGATATATAATATATTTAACAAATA
CAAATGAGTAGGTGAAATAC

Downstream 100 bases:

>100_bases
AATTATATTTAAAATGAATATTGATTTCTAGACAGAGTTAGAAGTAACTTAACTTTTTTATTCTTTATTAAGAAATTTTC
TTAGCCTTATCTAGAAATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSVDKNRINQDLKFICENIKKLEILNRLGEEAFLKDFKNVDSTKYLLRSSIEAVLDLSNYAVISNGWDMPENIEKTFKVL
REKNIIRDFEFEEYMELVNLKDKLTFMYASIEDEFIFNELKKTIIKLKNIKKSLDNLK

Sequences:

>Translated_138_residues
MSVDKNRINQDLKFICENIKKLEILNRLGEEAFLKDFKNVDSTKYLLRSSIEAVLDLSNYAVISNGWDMPENIEKTFKVL
REKNIIRDFEFEEYMELVNLKDKLTFMYASIEDEFIFNELKKTIIKLKNIKKSLDNLK
>Mature_137_residues
SVDKNRINQDLKFICENIKKLEILNRLGEEAFLKDFKNVDSTKYLLRSSIEAVLDLSNYAVISNGWDMPENIEKTFKVLR
EKNIIRDFEFEEYMELVNLKDKLTFMYASIEDEFIFNELKKTIIKLKNIKKSLDNLK

Specific function: Unknown

COG id: COG2445

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16424; Mature: 16293

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDKNRINQDLKFICENIKKLEILNRLGEEAFLKDFKNVDSTKYLLRSSIEAVLDLSNY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
AVISNGWDMPENIEKTFKVLREKNIIRDFEFEEYMELVNLKDKLTFMYASIEDEFIFNEL
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKTIIKLKNIKKSLDNLK
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SVDKNRINQDLKFICENIKKLEILNRLGEEAFLKDFKNVDSTKYLLRSSIEAVLDLSNY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
AVISNGWDMPENIEKTFKVLREKNIIRDFEFEEYMELVNLKDKLTFMYASIEDEFIFNEL
EEECCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KKTIIKLKNIKKSLDNLK
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA