Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is 18311060

Identifier: 18311060

GI number: 18311060

Start: 2382880

End: 2384328

Strand: Reverse

Name: 18311060

Synonym: CPE2078

Alternate gene names: NA

Gene position: 2384328-2382880 (Counterclockwise)

Preceding gene: 18311062

Following gene: 18311059

Centisome position: 78.65

GC content: 31.68

Gene sequence:

>1449_bases
ATGTTAAAATTCAAGAAACTAATAGCTTTAACAGCTTGTGCAATGTTAACTACTTCCGTTGCATTAACTGGATGTGGAGC
AGACAAAACAGCAAATGCTGGAGAGGGAGAAACAGTAAAACTTACTTGGTATACAATTGGACAAACACCAAAAGATTTAG
ACATGGTTCAAGAAAAAGCTAATGAATATTTAAAAGAAAAGATCAATGCTACTATTGATATGAAATTTATTGATTACGGT
GATTACACTCAAAAAATGGGAGTTATAATAAATTCAGGAGAACCATATGACTTAGCATTTACTTGTTCATGGGCTAACCC
ATATTTAGAAAATGCTAGAAAAGGAGCTTTCTTAGAAATAGACGAATTATTAGAAACTAAAGGTAAAGAAATGAAGTCTG
TTATAGATGAAAGATTCTGGGAAGGTGCTAAAATAGATGGTAAAACATATGCAGTTCCAAACCAAAAGGAAATAGGAGTT
GCACCTATGTGGGTATTCACTAAGGAATATGTTGATAAATACAATATACCATATCAAGATATCCATACTTTAGAAGATTT
AGAGCCATGGTTAAAGGTTATTCATGAAAATGAGCCAGATGTTACACCTTTATACATAACAAAAGGATTCTCAGCACCAG
CTTACTTCGATCAATTAGTTGATCCAGTAGGAGTTGAGTATGGAGATGAAAGCTTAAAGATTAAAAATATGTTTGAAACA
GATAAAATGAAGGGTGAATTAGAAACTTTACAAAAGTACTATGATGCTGGATATATAAATGCTGACTCAGCTACAGCTAA
GGATGATAAAGCAGTTAAGAGATTTGTAACTAAAGCTGATGGACAACCTTATGCTGATGGATTATGGTCAAAGGATTTAG
GATATGAGGTAGTTTCATCACCAATAATGGAAACTCATATTACTAATGGTTCAACTACAGGATCAATGATAGCTATTTCT
AAAACTTCAGAGCATCCAGAAAAAGCTATGGAATTCTTAAACTTATTAAACACTGACGTATATTTAAGAAACTTACTTAA
CTATGGTATAGAAGATGTTCACTATGAAAAAACTGGTGATACTCAAATAAAATTAACTGATAAAGCTAAAGACTACTCAG
TTGGATACTATACTTTAGGTAACTTATTCATAACTTATACTTTAGATAACGAACCAGTTGATAAATGGAAAGAATTCGAA
GCATTTAATGATGCATCAGTTGAATCACCTGCTTTAGGATTCAAATTTAACACTGAAAAAGTAAGTAACCAAATAGCTGC
TATAAACAACGTTCTTGAAGAGTTCAAGGCAACTATATACAGTGGATCAGTTAACGAAGCTGAATATTTAGATAAAATGA
ACAAGAAATTAAAAGAAGTTGGAATAGATGAAGTAATTTCAGAAATGCAAAGTCAAATAGATGCATGGAAAGCTGAAAAT
GGAAAATAA

Upstream 100 bases:

>100_bases
AAAAACTCCACTATGAAAATGTTTAGATGGGCTATATAATAAATCTGTAAACGATATTAAGGGATTTGAAAAACAAAGGT
TTAATAGGGAGGAAAACGTA

Downstream 100 bases:

>100_bases
TATAATTTTAAAATAAGTGTAAACTCTATGCCAAGCATAGAGTTTACTTTTATAAAAATATAAATAAAACTTATGAAAGT
ATTCTTACATAATCTAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MLKFKKLIALTACAMLTTSVALTGCGADKTANAGEGETVKLTWYTIGQTPKDLDMVQEKANEYLKEKINATIDMKFIDYG
DYTQKMGVIINSGEPYDLAFTCSWANPYLENARKGAFLEIDELLETKGKEMKSVIDERFWEGAKIDGKTYAVPNQKEIGV
APMWVFTKEYVDKYNIPYQDIHTLEDLEPWLKVIHENEPDVTPLYITKGFSAPAYFDQLVDPVGVEYGDESLKIKNMFET
DKMKGELETLQKYYDAGYINADSATAKDDKAVKRFVTKADGQPYADGLWSKDLGYEVVSSPIMETHITNGSTTGSMIAIS
KTSEHPEKAMEFLNLLNTDVYLRNLLNYGIEDVHYEKTGDTQIKLTDKAKDYSVGYYTLGNLFITYTLDNEPVDKWKEFE
AFNDASVESPALGFKFNTEKVSNQIAAINNVLEEFKATIYSGSVNEAEYLDKMNKKLKEVGIDEVISEMQSQIDAWKAEN
GK

Sequences:

>Translated_482_residues
MLKFKKLIALTACAMLTTSVALTGCGADKTANAGEGETVKLTWYTIGQTPKDLDMVQEKANEYLKEKINATIDMKFIDYG
DYTQKMGVIINSGEPYDLAFTCSWANPYLENARKGAFLEIDELLETKGKEMKSVIDERFWEGAKIDGKTYAVPNQKEIGV
APMWVFTKEYVDKYNIPYQDIHTLEDLEPWLKVIHENEPDVTPLYITKGFSAPAYFDQLVDPVGVEYGDESLKIKNMFET
DKMKGELETLQKYYDAGYINADSATAKDDKAVKRFVTKADGQPYADGLWSKDLGYEVVSSPIMETHITNGSTTGSMIAIS
KTSEHPEKAMEFLNLLNTDVYLRNLLNYGIEDVHYEKTGDTQIKLTDKAKDYSVGYYTLGNLFITYTLDNEPVDKWKEFE
AFNDASVESPALGFKFNTEKVSNQIAAINNVLEEFKATIYSGSVNEAEYLDKMNKKLKEVGIDEVISEMQSQIDAWKAEN
GK
>Mature_482_residues
MLKFKKLIALTACAMLTTSVALTGCGADKTANAGEGETVKLTWYTIGQTPKDLDMVQEKANEYLKEKINATIDMKFIDYG
DYTQKMGVIINSGEPYDLAFTCSWANPYLENARKGAFLEIDELLETKGKEMKSVIDERFWEGAKIDGKTYAVPNQKEIGV
APMWVFTKEYVDKYNIPYQDIHTLEDLEPWLKVIHENEPDVTPLYITKGFSAPAYFDQLVDPVGVEYGDESLKIKNMFET
DKMKGELETLQKYYDAGYINADSATAKDDKAVKRFVTKADGQPYADGLWSKDLGYEVVSSPIMETHITNGSTTGSMIAIS
KTSEHPEKAMEFLNLLNTDVYLRNLLNYGIEDVHYEKTGDTQIKLTDKAKDYSVGYYTLGNLFITYTLDNEPVDKWKEFE
AFNDASVESPALGFKFNTEKVSNQIAAINNVLEEFKATIYSGSVNEAEYLDKMNKKLKEVGIDEVISEMQSQIDAWKAEN
GK

Specific function: Unknown

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54347; Mature: 54347

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKFKKLIALTACAMLTTSVALTGCGADKTANAGEGETVKLTWYTIGQTPKDLDMVQEKA
CCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
NEYLKEKINATIDMKFIDYGDYTQKMGVIINSGEPYDLAFTCSWANPYLENARKGAFLEI
HHHHHHHHCCEEEEEEEECCCCHHCCCEEEECCCCEEEEEEECCCCHHHHHCCCCCEEEH
DELLETKGKEMKSVIDERFWEGAKIDGKTYAVPNQKEIGVAPMWVFTKEYVDKYNIPYQD
HHHHHHCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHH
IHTLEDLEPWLKVIHENEPDVTPLYITKGFSAPAYFDQLVDPVGVEYGDESLKIKNMFET
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHH
DKMKGELETLQKYYDAGYINADSATAKDDKAVKRFVTKADGQPYADGLWSKDLGYEVVSS
HHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
PIMETHITNGSTTGSMIAISKTSEHPEKAMEFLNLLNTDVYLRNLLNYGIEDVHYEKTGD
CHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
TQIKLTDKAKDYSVGYYTLGNLFITYTLDNEPVDKWKEFEAFNDASVESPALGFKFNTEK
CEEEEECCCCCCCCCEEEECCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEECHHH
VSNQIAAINNVLEEFKATIYSGSVNEAEYLDKMNKKLKEVGIDEVISEMQSQIDAWKAEN
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
GK
CC
>Mature Secondary Structure
MLKFKKLIALTACAMLTTSVALTGCGADKTANAGEGETVKLTWYTIGQTPKDLDMVQEKA
CCHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHH
NEYLKEKINATIDMKFIDYGDYTQKMGVIINSGEPYDLAFTCSWANPYLENARKGAFLEI
HHHHHHHHCCEEEEEEEECCCCHHCCCEEEECCCCEEEEEEECCCCHHHHHCCCCCEEEH
DELLETKGKEMKSVIDERFWEGAKIDGKTYAVPNQKEIGVAPMWVFTKEYVDKYNIPYQD
HHHHHHCCHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHH
IHTLEDLEPWLKVIHENEPDVTPLYITKGFSAPAYFDQLVDPVGVEYGDESLKIKNMFET
HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEHHHHHH
DKMKGELETLQKYYDAGYINADSATAKDDKAVKRFVTKADGQPYADGLWSKDLGYEVVSS
HHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHC
PIMETHITNGSTTGSMIAISKTSEHPEKAMEFLNLLNTDVYLRNLLNYGIEDVHYEKTGD
CHHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCC
TQIKLTDKAKDYSVGYYTLGNLFITYTLDNEPVDKWKEFEAFNDASVESPALGFKFNTEK
CEEEEECCCCCCCCCEEEECCEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEECHHH
VSNQIAAINNVLEEFKATIYSGSVNEAEYLDKMNKKLKEVGIDEVISEMQSQIDAWKAEN
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCC
GK
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA