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The map label for this gene is ycfX [C]

Identifier: 18311059

GI number: 18311059

Start: 2381846

End: 2382739

Strand: Reverse

Name: ycfX [C]

Synonym: CPE2077

Alternate gene names: 18311059

Gene position: 2382739-2381846 (Counterclockwise)

Preceding gene: 18311060

Following gene: 18311058

Centisome position: 78.6

GC content: 31.54

Gene sequence:

>894_bases
ATGAAGAAATATGTTGTTATTGATATTGGGGGAACGAGTATAAAACATGCTTTGATGACTGAAAGTGGAGATATTTTAGA
AAAAGGAAGCATGAAAACAAACGGGGATAATATAGATCTTTTTATTGAATCCATAGGAAAAGTTGTTGATTCATATAAAG
AAAAAAATGAGGTTTTTGGATTAGCATGTAGTTCGCCAGGTGCTGTAGATGTTAAAACAGGATTTATAGGGGGAGGAAGT
GCCATTCCTTGCATACATGGTCCAAATATAAAAGAGCTTTTAGAAAAAAGATGTGGTTTAGAGGTTTCTATAGAAAATGA
TGCAAATTGCGCTGGATTAGCGGAAGGATGGCTTGGATCAGCTAAAGGAGTAGAAAATTATGCATGTATTGTAATTGGTA
CAGGAATAGGTGGATGCATAGTTATAAATGGAAGAATTTTAAGAGGAAAGCATCTTCATGGGGGAGAATTTGGTTATATG
TTTACTAGAGATAGTGAAGGATTAACAGATAGAATTTGGAGTGAAGTTTCCTCTACTAATGCTTTAGTTACAAGGGTATC
TAAATTAAAAGGAATAGAAAAATCAGAACTTGATGGAAAAAAAGTTTTTGAAATGGCTGAAGATGGAGACGAGGAAGTTA
ATAAGGAAATAGAATCATGGTATATGGATCTTGCAAGGGGAATATATAATATTCAATATATAGTTGATCCTGAAAAAATT
GTTATTGGTGGAGCTATAAGTGCTAGGGATGGATTTGATAAGAAAATAAATGAAAAACTTGCTTTACTAAAAAGTGATAT
AGCAACTTTAGATATAAGTGTTGAAAAATGCAAATTTCAAAATGATTCAAATTTAATAGGAGCATTATATAACTTTCTTT
TTGTTAGAAAATAA

Upstream 100 bases:

>100_bases
AGTTTACTTTTATAAAAATATAAATAAAACTTATGAAAGTATTCTTACATAATCTAAGGAGTAGATTATAAATAATATGT
ATAGCGGGGGATGATTTTAT

Downstream 100 bases:

>100_bases
ATCTTATTATTTCAAGAAAAATCATATAGATAAAAAGGGGAAAATGTTATGGCGCAATTAAATTACAGAGAGAATTTAAA
TATGAAATTTAAAGCTTATA

Product: ROK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MKKYVVIDIGGTSIKHALMTESGDILEKGSMKTNGDNIDLFIESIGKVVDSYKEKNEVFGLACSSPGAVDVKTGFIGGGS
AIPCIHGPNIKELLEKRCGLEVSIENDANCAGLAEGWLGSAKGVENYACIVIGTGIGGCIVINGRILRGKHLHGGEFGYM
FTRDSEGLTDRIWSEVSSTNALVTRVSKLKGIEKSELDGKKVFEMAEDGDEEVNKEIESWYMDLARGIYNIQYIVDPEKI
VIGGAISARDGFDKKINEKLALLKSDIATLDISVEKCKFQNDSNLIGALYNFLFVRK

Sequences:

>Translated_297_residues
MKKYVVIDIGGTSIKHALMTESGDILEKGSMKTNGDNIDLFIESIGKVVDSYKEKNEVFGLACSSPGAVDVKTGFIGGGS
AIPCIHGPNIKELLEKRCGLEVSIENDANCAGLAEGWLGSAKGVENYACIVIGTGIGGCIVINGRILRGKHLHGGEFGYM
FTRDSEGLTDRIWSEVSSTNALVTRVSKLKGIEKSELDGKKVFEMAEDGDEEVNKEIESWYMDLARGIYNIQYIVDPEKI
VIGGAISARDGFDKKINEKLALLKSDIATLDISVEKCKFQNDSNLIGALYNFLFVRK
>Mature_297_residues
MKKYVVIDIGGTSIKHALMTESGDILEKGSMKTNGDNIDLFIESIGKVVDSYKEKNEVFGLACSSPGAVDVKTGFIGGGS
AIPCIHGPNIKELLEKRCGLEVSIENDANCAGLAEGWLGSAKGVENYACIVIGTGIGGCIVINGRILRGKHLHGGEFGYM
FTRDSEGLTDRIWSEVSSTNALVTRVSKLKGIEKSELDGKKVFEMAEDGDEEVNKEIESWYMDLARGIYNIQYIVDPEKI
VIGGAISARDGFDKKINEKLALLKSDIATLDISVEKCKFQNDSNLIGALYNFLFVRK

Specific function: Unknown

COG id: COG1940

COG function: function code KG; Transcriptional regulator/sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ROK (nagC/xylR) family [H]

Homologues:

Organism=Escherichia coli, GI1787363, Length=305, Percent_Identity=24.2622950819672, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI87081733, Length=297, Percent_Identity=23.9057239057239, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1786891, Length=226, Percent_Identity=27.4336283185841, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000600 [H]

Pfam domain/function: PF00480 ROK [H]

EC number: NA

Molecular weight: Translated: 32244; Mature: 32244

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYVVIDIGGTSIKHALMTESGDILEKGSMKTNGDNIDLFIESIGKVVDSYKEKNEVFG
CCEEEEEEECCCHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
LACSSPGAVDVKTGFIGGGSAIPCIHGPNIKELLEKRCGLEVSIENDANCAGLAEGWLGS
EEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHCCCC
AKGVENYACIVIGTGIGGCIVINGRILRGKHLHGGEFGYMFTRDSEGLTDRIWSEVSSTN
CCCCCCEEEEEEECCCCEEEEECCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCH
ALVTRVSKLKGIEKSELDGKKVFEMAEDGDEEVNKEIESWYMDLARGIYNIQYIVDPEKI
HHHHHHHHHCCCCHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCEE
VIGGAISARDGFDKKINEKLALLKSDIATLDISVEKCKFQNDSNLIGALYNFLFVRK
EEECCEECCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKKYVVIDIGGTSIKHALMTESGDILEKGSMKTNGDNIDLFIESIGKVVDSYKEKNEVFG
CCEEEEEEECCCHHHHHHHCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEE
LACSSPGAVDVKTGFIGGGSAIPCIHGPNIKELLEKRCGLEVSIENDANCAGLAEGWLGS
EEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCHHHHHCCCC
AKGVENYACIVIGTGIGGCIVINGRILRGKHLHGGEFGYMFTRDSEGLTDRIWSEVSSTN
CCCCCCEEEEEEECCCCEEEEECCEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHCCH
ALVTRVSKLKGIEKSELDGKKVFEMAEDGDEEVNKEIESWYMDLARGIYNIQYIVDPEKI
HHHHHHHHHCCCCHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEEEECCCEE
VIGGAISARDGFDKKINEKLALLKSDIATLDISVEKCKFQNDSNLIGALYNFLFVRK
EEECCEECCCCCHHHHHHHHHHHHHCCEEEEEEHHHCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11792842; 8177218 [H]