| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is gpr [H]
Identifier: 18311023
GI number: 18311023
Start: 2332979
End: 2333956
Strand: Reverse
Name: gpr [H]
Synonym: CPE2041
Alternate gene names: 18311023
Gene position: 2333956-2332979 (Counterclockwise)
Preceding gene: 18311025
Following gene: 18311022
Centisome position: 76.99
GC content: 34.36
Gene sequence:
>978_bases ATGTACAATGTAAGAACTGATTTAGCTGTTGAAAGTAGAGAGATTTATAAACATAGATATAATAGGGAAATTGATGGGGT AGTTTTTGAAGAAAAGACTGTGGAAGAGGATATTAAAGTTACAAATGTTGACATATTAAATGAGGAAGGCGCTAAAGCTA TGGAAAAACCTATAGGTAGATATGTTACCATAGATATCCCTGAGTACACTCATTATGACGGTGGCATAATGGATGAGGTT TCTCATGTGGTGGCAGCCTCCTTAGAAGAACTTATTAATTTACCAGAGGAAAGAACGGCTTTAGTAGTTGGGCTTGGAAA CTGGAATGTTACACCTGACGCCATAGGACCTAAGGTTGTAGGAAAATTAATGGTAACAAGACATTTAAAGAAGGTTATGC CAGACATAATAGATGATTCAGTAAGACCAGTTTGCGCCATAGCACCTGGAGTTTTAGGCATAACAGGAATTGAAACTGGA GAGATAATAAAATCATTAGTGGAAAAAATAAAACCAGATTTAGTAGTTTGTATTGATGCCTTAGCTTCAAGAAAACTAGA AAGAGTGGCTAGAACCATTCAAATAAGCAATACTGGAATATCACCAGGGGCTGGAGTTGGAAATCATAGAATGCAAATAA ATGAAGAAAGCTTAGGTATCCCTGTTATTGCCTTAGGAGTACCAACTGTTGTGGATGCAGCTACTATTGCAAATGATGCC ATGGATTTAGTTTTAGATGAAATGATAAATCAAGCAGATGCTGGCAAAGAGTTTTATAATATATTAAATAACATAGATAA GAATGAAAAGGGAATGATGATAAAGAGCCTTTTAGATCCTTATGTAGGAGACTTAATGGTTACCCCAAAAGAAATAGACG ATATAATAGAATCAGTTTCAAAAATAATAGCAAATGGAATTAATATAGCCCTTCAACCTAATATGGTGTTAGAGGATATA AATAAATTTTTAAACTAA
Upstream 100 bases:
>100_bases ATATATAAGTTCAAGTCTTTTTTCGTGTTTATCGACATAATTATCATTTTTAAGGAGATTATATATAATATATAAATTTA AATTAAAAAGAGGTGGAAAA
Downstream 100 bases:
>100_bases GACTGGGTTTAAAATTAAAAGTTTTATTAAGATATTTTTTAGAATTATGAGTGAATTTGAAGAAGAATAAATTAAATATT TACCTAAAGAGAGTAACATA
Product: germination protease
Products: NA
Alternate protein names: GPR endopeptidase; Germination proteinase; Spore protease [H]
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MYNVRTDLAVESREIYKHRYNREIDGVVFEEKTVEEDIKVTNVDILNEEGAKAMEKPIGRYVTIDIPEYTHYDGGIMDEV SHVVAASLEELINLPEERTALVVGLGNWNVTPDAIGPKVVGKLMVTRHLKKVMPDIIDDSVRPVCAIAPGVLGITGIETG EIIKSLVEKIKPDLVVCIDALASRKLERVARTIQISNTGISPGAGVGNHRMQINEESLGIPVIALGVPTVVDAATIANDA MDLVLDEMINQADAGKEFYNILNNIDKNEKGMMIKSLLDPYVGDLMVTPKEIDDIIESVSKIIANGINIALQPNMVLEDI NKFLN
Sequences:
>Translated_325_residues MYNVRTDLAVESREIYKHRYNREIDGVVFEEKTVEEDIKVTNVDILNEEGAKAMEKPIGRYVTIDIPEYTHYDGGIMDEV SHVVAASLEELINLPEERTALVVGLGNWNVTPDAIGPKVVGKLMVTRHLKKVMPDIIDDSVRPVCAIAPGVLGITGIETG EIIKSLVEKIKPDLVVCIDALASRKLERVARTIQISNTGISPGAGVGNHRMQINEESLGIPVIALGVPTVVDAATIANDA MDLVLDEMINQADAGKEFYNILNNIDKNEKGMMIKSLLDPYVGDLMVTPKEIDDIIESVSKIIANGINIALQPNMVLEDI NKFLN >Mature_325_residues MYNVRTDLAVESREIYKHRYNREIDGVVFEEKTVEEDIKVTNVDILNEEGAKAMEKPIGRYVTIDIPEYTHYDGGIMDEV SHVVAASLEELINLPEERTALVVGLGNWNVTPDAIGPKVVGKLMVTRHLKKVMPDIIDDSVRPVCAIAPGVLGITGIETG EIIKSLVEKIKPDLVVCIDALASRKLERVARTIQISNTGISPGAGVGNHRMQINEESLGIPVIALGVPTVVDAATIANDA MDLVLDEMINQADAGKEFYNILNNIDKNEKGMMIKSLLDPYVGDLMVTPKEIDDIIESVSKIIANGINIALQPNMVLEDI NKFLN
Specific function: Initiates the rapid degradation of small, acid-soluble proteins during spore germination [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase A25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005080 - InterPro: IPR000671 - ProDom: PD041835 [H]
Pfam domain/function: PF03418 Peptidase_A25 [H]
EC number: =3.4.24.78 [H]
Molecular weight: Translated: 35635; Mature: 35635
Theoretical pI: Translated: 4.41; Mature: 4.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYNVRTDLAVESREIYKHRYNREIDGVVFEEKTVEEDIKVTNVDILNEEGAKAMEKPIGR CCCCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCEEEEEEEECCCCHHHHHHCCCC YVTIDIPEYTHYDGGIMDEVSHVVAASLEELINLPEERTALVVGLGNWNVTPDAIGPKVV EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHCCHHHH GKLMVTRHLKKVMPDIIDDSVRPVCAIAPGVLGITGIETGEIIKSLVEKIKPDLVVCIDA HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHEECCCCHHHHHHHHHHHHCCHHHHHHHH LASRKLERVARTIQISNTGISPGAGVGNHRMQINEESLGIPVIALGVPTVVDAATIANDA HHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHH MDLVLDEMINQADAGKEFYNILNNIDKNEKGMMIKSLLDPYVGDLMVTPKEIDDIIESVS HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEECHHHHHHHHHHHH KIIANGINIALQPNMVLEDINKFLN HHHHCCCCEEECCCHHHHHHHHHCC >Mature Secondary Structure MYNVRTDLAVESREIYKHRYNREIDGVVFEEKTVEEDIKVTNVDILNEEGAKAMEKPIGR CCCCCCCHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCEEEEEEEECCCCHHHHHHCCCC YVTIDIPEYTHYDGGIMDEVSHVVAASLEELINLPEERTALVVGLGNWNVTPDAIGPKVV EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHCCHHHH GKLMVTRHLKKVMPDIIDDSVRPVCAIAPGVLGITGIETGEIIKSLVEKIKPDLVVCIDA HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCHHEECCCCHHHHHHHHHHHHCCHHHHHHHH LASRKLERVARTIQISNTGISPGAGVGNHRMQINEESLGIPVIALGVPTVVDAATIANDA HHHHHHHHHHHHHEECCCCCCCCCCCCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHH MDLVLDEMINQADAGKEFYNILNNIDKNEKGMMIKSLLDPYVGDLMVTPKEIDDIIESVS HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCEEECHHHHHHHHHHHH KIIANGINIALQPNMVLEDINKFLN HHHHCCCCEEECCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA