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The map label for this gene is yhjL [C]

Identifier: 18310970

GI number: 18310970

Start: 2277830

End: 2278765

Strand: Reverse

Name: yhjL [C]

Synonym: CPE1988

Alternate gene names: 18310970

Gene position: 2278765-2277830 (Counterclockwise)

Preceding gene: 18310971

Following gene: 18310969

Centisome position: 75.17

GC content: 27.67

Gene sequence:

>936_bases
ATGGATAATAACTATAGAATTATAGATAATTATATACGTAGTGGTGATAAAGCTCATGATGAAGGGAATTTAATAAAGGC
CTTAAATTATTATTTAAGAGCAGAGGAGCTTCTAGAAGGAGAAAGAGATATTGATTTAATAATAAGTATAGCTTTAATGC
TAGATGAGTTAGGAGATACTGAAAAGGCCAAGGAAAAATATGAAGAAGCCTTAAGTATAAATAGTTTTGAGGTTAGAGCT
TATTATGGATTAGCAGTGATTTATGATGAAAAAGAGGATTATGTAAAGGCTATAGAATTATATAAAAAGGCTATAGATAT
AAATCCTGTTTATGATAGAGCTATATTCTTCTTAGCAAATGCACTAGATAATGTGGGAGATAAAGAAGGGGCAATAGAGT
ATTACAAAAAGACAATAGAGGTTTGCAAAGAAGACTTTTGGGCCCATATAAATTTAGGATCTATATATGAAGAAAGAGAT
ATGCTTCAAGAGGCCTATAGAATGTTTTCTAAAGCTCTTCAAATAGATGGAGAGCACTATTTAGCTCTTTTTAATATGGG
AGTAATATATAAGAGATTAAATGTATATGATAAGGCTAAGAAATTTTATGAGAAAGCCATTAAAAAGAATTTTGGTTATG
CTTTTTCATTCTTAAATTTGGCAGTTATATATAAGGAAGAAAATAATATAGAAAAAGGAATAGAGATATTATCACTAGGT
TTAAGATTTAATCCGGAAAATCATTTTTTATATTATAATAGAAGTTGCTTTAAGGCTATTTTAGGAAAAGATTTAGAGGA
TGCCGCAGAGGATTTAATTAAAGCTGTTGAATTTTATCCAGAATTTATAAAATATATAAATAAAGATAATGATTTAATTG
AGGTAAGAAATAGTAATAAGTTTAAAAGTTTCTTAGAGACCTTAGATATTGGTTAA

Upstream 100 bases:

>100_bases
GAGTATTAATTAGGAGTGTGTCAAAATTTTGATACCTCCTTTTTGCTTTATGTAAGTTAAGATGATTTTGATATAATAGA
TTAGAAAAATAGGAGAAGAT

Downstream 100 bases:

>100_bases
TTCCAATATTTAAGGTCTTTTAAATTACAATTAAATACAATAATTTACAAAAATTAAATAATTTCCTCTCTTTTTTATGA
TAATGTATATTTATATGGTT

Product: tetratricopeptide repeat protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide TPR_1 Repeat-Containing Protein; Tetratricopeptide Repeat Protein; TPR Domain-Containing Protein; TPR Domain Containing Protein; TPR-Repeat-Containing Protein; Sulfotransferase; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain-Containing Protein; Conserved Protein Tetratricopeptide Repeat Family Protein; O-Linked GlcNAc Transferase; Beta-Lactamase Domain-Containing Protein; Tetratricopeptide Repeat Domain Protein

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MDNNYRIIDNYIRSGDKAHDEGNLIKALNYYLRAEELLEGERDIDLIISIALMLDELGDTEKAKEKYEEALSINSFEVRA
YYGLAVIYDEKEDYVKAIELYKKAIDINPVYDRAIFFLANALDNVGDKEGAIEYYKKTIEVCKEDFWAHINLGSIYEERD
MLQEAYRMFSKALQIDGEHYLALFNMGVIYKRLNVYDKAKKFYEKAIKKNFGYAFSFLNLAVIYKEENNIEKGIEILSLG
LRFNPENHFLYYNRSCFKAILGKDLEDAAEDLIKAVEFYPEFIKYINKDNDLIEVRNSNKFKSFLETLDIG

Sequences:

>Translated_311_residues
MDNNYRIIDNYIRSGDKAHDEGNLIKALNYYLRAEELLEGERDIDLIISIALMLDELGDTEKAKEKYEEALSINSFEVRA
YYGLAVIYDEKEDYVKAIELYKKAIDINPVYDRAIFFLANALDNVGDKEGAIEYYKKTIEVCKEDFWAHINLGSIYEERD
MLQEAYRMFSKALQIDGEHYLALFNMGVIYKRLNVYDKAKKFYEKAIKKNFGYAFSFLNLAVIYKEENNIEKGIEILSLG
LRFNPENHFLYYNRSCFKAILGKDLEDAAEDLIKAVEFYPEFIKYINKDNDLIEVRNSNKFKSFLETLDIG
>Mature_311_residues
MDNNYRIIDNYIRSGDKAHDEGNLIKALNYYLRAEELLEGERDIDLIISIALMLDELGDTEKAKEKYEEALSINSFEVRA
YYGLAVIYDEKEDYVKAIELYKKAIDINPVYDRAIFFLANALDNVGDKEGAIEYYKKTIEVCKEDFWAHINLGSIYEERD
MLQEAYRMFSKALQIDGEHYLALFNMGVIYKRLNVYDKAKKFYEKAIKKNFGYAFSFLNLAVIYKEENNIEKGIEILSLG
LRFNPENHFLYYNRSCFKAILGKDLEDAAEDLIKAVEFYPEFIKYINKDNDLIEVRNSNKFKSFLETLDIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32307148, Length=277, Percent_Identity=28.5198555956679, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI32307150, Length=277, Percent_Identity=28.5198555956679, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI310131789, Length=273, Percent_Identity=23.0769230769231, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI310110582, Length=273, Percent_Identity=23.0769230769231, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI310123097, Length=273, Percent_Identity=23.0769230769231, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI118766328, Length=155, Percent_Identity=27.741935483871, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI118766330, Length=155, Percent_Identity=27.741935483871, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115532690, Length=279, Percent_Identity=28.673835125448, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI115532692, Length=279, Percent_Identity=28.673835125448, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI17647755, Length=246, Percent_Identity=28.0487804878049, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24585827, Length=246, Percent_Identity=28.0487804878049, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24585829, Length=246, Percent_Identity=28.0487804878049, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36425; Mature: 36425

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNNYRIIDNYIRSGDKAHDEGNLIKALNYYLRAEELLEGERDIDLIISIALMLDELGDT
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH
EKAKEKYEEALSINSFEVRAYYGLAVIYDEKEDYVKAIELYKKAIDINPVYDRAIFFLAN
HHHHHHHHHHHCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ALDNVGDKEGAIEYYKKTIEVCKEDFWAHINLGSIYEERDMLQEAYRMFSKALQIDGEHY
HHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
LALFNMGVIYKRLNVYDKAKKFYEKAIKKNFGYAFSFLNLAVIYKEENNIEKGIEILSLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCCCHHHHHHHHHCC
LRFNPENHFLYYNRSCFKAILGKDLEDAAEDLIKAVEFYPEFIKYINKDNDLIEVRNSNK
CEECCCCCEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHH
FKSFLETLDIG
HHHHHHHHCCC
>Mature Secondary Structure
MDNNYRIIDNYIRSGDKAHDEGNLIKALNYYLRAEELLEGERDIDLIISIALMLDELGDT
CCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCH
EKAKEKYEEALSINSFEVRAYYGLAVIYDEKEDYVKAIELYKKAIDINPVYDRAIFFLAN
HHHHHHHHHHHCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ALDNVGDKEGAIEYYKKTIEVCKEDFWAHINLGSIYEERDMLQEAYRMFSKALQIDGEHY
HHHCCCCCCHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
LALFNMGVIYKRLNVYDKAKKFYEKAIKKNFGYAFSFLNLAVIYKEENNIEKGIEILSLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHEEEEEECCCCHHHHHHHHHCC
LRFNPENHFLYYNRSCFKAILGKDLEDAAEDLIKAVEFYPEFIKYINKDNDLIEVRNSNK
CEECCCCCEEEECHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHH
FKSFLETLDIG
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA