| Definition | Clostridium perfringens str. 13, complete genome. |
|---|---|
| Accession | NC_003366 |
| Length | 3,031,430 |
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The map label for this gene is 18310971
Identifier: 18310971
GI number: 18310971
Start: 2278886
End: 2279806
Strand: Reverse
Name: 18310971
Synonym: CPE1989
Alternate gene names: NA
Gene position: 2279806-2278886 (Counterclockwise)
Preceding gene: 18310972
Following gene: 18310970
Centisome position: 75.21
GC content: 29.64
Gene sequence:
>921_bases TTGAGAGAGAATTTTATATTTAAAGATGATGAAGGATTAGAATTACAAGGATATAAATGGAGTAATAGAAAAGAATTTAA GGCAGTTATTCACATATTACATGGAATGACAGAGGATGCTATTAGATATGATGAATTTGCAGAAAAACTTGTTGAAGCAG GATTTTTAGTTTATGCTCATGACCATAGAGGGCATGGCTTTACAGCTAAGGATTTAGATTCTTTAGGATATCAAGCAGAA AATGATGGATTCCAATGGATGATTGATGATGCTAAAACTTTAATAGAGTCTTCTAAAGAAAAACATAAAGGATATAAAAT AATACTTTTTGGACATAGTATGGGATCTTTTGTAAGTCAGAGGCTAGTTCAAGAATATAATGATTTAGTAGATGTATTGG TTTTATCGGGAACTAATGGTGAGCCAGATAAGTTAGCCCCACTTGGAGAATTTGTAGCTCAAGTAGAAATGTCATTAAAG GGAAGAGAACATAAAAGTAAACTTATGGACAAGTTGATTTTTGGAGGCTTTAATAAGAATTTTAAACCAAATAGGACAGA TTTTGATTGGCTTTGTAGTGTAGAAAGTGAAGTAGACAAGTATATAGAAAATGAAAGATATGGTTTTATATGTTCAAGTT CCTTTTATTACGATTTGTTAAGAGGGGTAAGAAGCATACATAAAGCTGAAAATATGAATAGAATAAATAAAGAAATGCCT ATTTATATTTTTGGCGGAGATAAAGATCCAGTAGGTAATTTTGGTAAAGGTGTAATCAACTTAAAAGATAAATTAGAAAA AGTAGGAGTAAAAAACATTCAGTATAAGCTATATGAAAATGGAAGACATGAAATGTTAAATGAAAAAAATAAAGTAGAAG TTATGGAAGATACTATTCAGTGGCTGTTGAAAAATATTTAA
Upstream 100 bases:
>100_bases AGTAAATCACTTAAAGTATCTGTTTAAAGATTTTAGATTAAGTAGTATCTTAGTATTAAGAAGATTTTTATACTACATAG TCTAAAAGGAGTTGATAGAT
Downstream 100 bases:
>100_bases AAGATATATATAATTAATTAGAGTATTAATTAGGAGTGTGTCAAAATTTTGATACCTCCTTTTTGCTTTATGTAAGTTAA GATGATTTTGATATAATAGA
Product: hydrolase, alpha/beta fold family
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold; Alpha/Beta Fold Family Hydrolase; Hydrolase; Hydrolase Alpha/Beta Fold Family; Hydrolase Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase; Lipase; Lysophospholipase Protein; Hydrolase Alpha/Beta Fold Family Protein; Lysophospholipase-Like Protein; Carboxylic Ester Hydrolase; Monoacylglycerol Lipase; Alpha/Beta Hydrolase Family Protein; S33 Family Lysophospholipase; Alpha/Beta Fold Family Protein Hydrolase; Aminopeptidase; Hydrolase Alpha/Beta Domain-Containing Protein; Lysophospholipase/Monoglyceride Lipase
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MRENFIFKDDEGLELQGYKWSNRKEFKAVIHILHGMTEDAIRYDEFAEKLVEAGFLVYAHDHRGHGFTAKDLDSLGYQAE NDGFQWMIDDAKTLIESSKEKHKGYKIILFGHSMGSFVSQRLVQEYNDLVDVLVLSGTNGEPDKLAPLGEFVAQVEMSLK GREHKSKLMDKLIFGGFNKNFKPNRTDFDWLCSVESEVDKYIENERYGFICSSSFYYDLLRGVRSIHKAENMNRINKEMP IYIFGGDKDPVGNFGKGVINLKDKLEKVGVKNIQYKLYENGRHEMLNEKNKVEVMEDTIQWLLKNI
Sequences:
>Translated_306_residues MRENFIFKDDEGLELQGYKWSNRKEFKAVIHILHGMTEDAIRYDEFAEKLVEAGFLVYAHDHRGHGFTAKDLDSLGYQAE NDGFQWMIDDAKTLIESSKEKHKGYKIILFGHSMGSFVSQRLVQEYNDLVDVLVLSGTNGEPDKLAPLGEFVAQVEMSLK GREHKSKLMDKLIFGGFNKNFKPNRTDFDWLCSVESEVDKYIENERYGFICSSSFYYDLLRGVRSIHKAENMNRINKEMP IYIFGGDKDPVGNFGKGVINLKDKLEKVGVKNIQYKLYENGRHEMLNEKNKVEVMEDTIQWLLKNI >Mature_306_residues MRENFIFKDDEGLELQGYKWSNRKEFKAVIHILHGMTEDAIRYDEFAEKLVEAGFLVYAHDHRGHGFTAKDLDSLGYQAE NDGFQWMIDDAKTLIESSKEKHKGYKIILFGHSMGSFVSQRLVQEYNDLVDVLVLSGTNGEPDKLAPLGEFVAQVEMSLK GREHKSKLMDKLIFGGFNKNFKPNRTDFDWLCSVESEVDKYIENERYGFICSSSFYYDLLRGVRSIHKAENMNRINKEMP IYIFGGDKDPVGNFGKGVINLKDKLEKVGVKNIQYKLYENGRHEMLNEKNKVEVMEDTIQWLLKNI
Specific function: Unknown
COG id: COG2267
COG function: function code I; Lysophospholipase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35451; Mature: 35451
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRENFIFKDDEGLELQGYKWSNRKEFKAVIHILHGMTEDAIRYDEFAEKLVEAGFLVYAH CCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEE DHRGHGFTAKDLDSLGYQAENDGFQWMIDDAKTLIESSKEKHKGYKIILFGHSMGSFVSQ CCCCCCCCHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCHHHHCCEEEEEEECCHHHHHHH RLVQEYNDLVDVLVLSGTNGEPDKLAPLGEFVAQVEMSLKGREHKSKLMDKLIFGGFNKN HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC FKPNRTDFDWLCSVESEVDKYIENERYGFICSSSFYYDLLRGVRSIHKAENMNRINKEMP CCCCCCCHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC IYIFGGDKDPVGNFGKGVINLKDKLEKVGVKNIQYKLYENGRHEMLNEKNKVEVMEDTIQ EEEECCCCCCCCCCCCCEECHHHHHHHCCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHH WLLKNI HHHHCC >Mature Secondary Structure MRENFIFKDDEGLELQGYKWSNRKEFKAVIHILHGMTEDAIRYDEFAEKLVEAGFLVYAH CCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEE DHRGHGFTAKDLDSLGYQAENDGFQWMIDDAKTLIESSKEKHKGYKIILFGHSMGSFVSQ CCCCCCCCHHHHHHCCCCCCCCCCEEEHHHHHHHHHCCHHHHCCEEEEEEECCHHHHHHH RLVQEYNDLVDVLVLSGTNGEPDKLAPLGEFVAQVEMSLKGREHKSKLMDKLIFGGFNKN HHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC FKPNRTDFDWLCSVESEVDKYIENERYGFICSSSFYYDLLRGVRSIHKAENMNRINKEMP CCCCCCCHHHHCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCC IYIFGGDKDPVGNFGKGVINLKDKLEKVGVKNIQYKLYENGRHEMLNEKNKVEVMEDTIQ EEEECCCCCCCCCCCCCEECHHHHHHHCCCCCEEEEEECCCHHHHHCCCCHHHHHHHHHH WLLKNI HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA